RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 HOXA7P31268 230 aaPredicted RBP17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 ERAP2Q6P179 960 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 DENND1BQ6P3S1 775 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 CPB2Q96IY4 423 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 MRPL39Q9NYK5 338 aaKnown RBP17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 KDM5CP41229 1560 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 GCLCP48506 637 aaPredicted RBP17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 TRIM32Q13049 653 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 NT5C1AQ9BXI3 368 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 IL5RAQ01344 420 aa17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 RSBN1Q5VWQ0 802 aaPredicted RBP17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 ILKAPQ9H0C8 392 aaPredicted RBP17.4■□□□□ 0.38
TSPAN3-201ENST00000267970 NDUFB5O43674 189 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 CYP7B1O75881 506 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 PAX7P23759 505 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 TSC22D1Q15714 1073 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 FOXR1Q6PIV2 292 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 MIEF2Q96C03 454 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 PHF21BQ96EK2 531 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 RUSC1Q9BVN2 902 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 PARVBQ9HBI1 364 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 CHKBQ9Y259 395 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 ZSCAN5CA6NGD5 496 aaPredicted RBP17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 ST13P50502 369 aaKnown RBP17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 UBASH3BQ8TF42 649 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 ITIH6Q6UXX5 1313 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 AATKQ6ZMQ8 1374 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 SLC37A4O43826 429 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 RALBP11234 206 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 PSMC6P62333 389 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 SHROOM1Q2M3G4 852 aaPredicted RBP17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 ATG9AQ7Z3C6 839 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 PARP8Q8N3A8 854 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 A0A087X0T9 212 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 ALDH1A1P00352 501 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 FAM228BP0C875 321 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 RASA2Q15283 850 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 PDPK2PQ6A1A2 396 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 ELMSAN1Q6PJG2 1045 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 TMED8Q6PL24 325 aaPredicted RBP17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 SH3BP1Q9Y3L3 701 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 ALOX15P16050 662 aaPredicted RBP17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 WEE1P30291 646 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 MMRN1Q13201 1228 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 ZBTB46Q86UZ6 589 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 UTP15Q8TED0 518 aaKnown RBP17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 HPDLQ96IR7 371 aa17.39■□□□□ 0.37
TSPAN3-201ENST00000267970 PEX1O43933 1283 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 MFN2O95140 757 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 CTDNEP1O95476 244 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 ATP6V1G2O95670 118 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 CYP2B6P20813 491 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 PDK1Q15118 436 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 C11orf88Q6PI97 169 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 CES3Q6UWW8 571 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 NT5DC3Q86UY8 548 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 POU5F2Q8N7G0 328 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 TDRD5Q8NAT2 981 aaKnown RBP17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 FIG4Q92562 907 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 NSUN4Q96CB9 384 aaKnown RBP17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 GPRASP2Q96D09 838 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 CINPQ9BW66 212 aaPredicted RBP17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 CCSER1Q9C0I3 900 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 UBXN8O00124 270 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 NDUFB10O96000 172 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 CSHL1Q14406 222 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 AASDHQ4L235 1098 aaPredicted RBP17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 LRRC8DQ7L1W4 858 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 SYBUQ9NX95 663 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 HPS5Q9UPZ3 1129 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 ERI2A8K979 691 aaKnown RBP17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 FOXN3O00409 490 aaPredicted RBP17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 UGP2Q16851 508 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 ZSWIM7Q19AV6 140 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 MIB1Q86YT6 1006 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 UNC45BQ8IWX7 931 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 MTMR4Q9NYA4 1195 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 TRMT6Q9UJA5 497 aaKnown RBP17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 FLT1P17948 1338 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 SSU72P8A0A1W2PR75 194 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 TPH1P17752 444 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 PRUNE1Q86TP1 453 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 SLC13A5Q86YT5 568 aaPredicted RBP17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 MTFMTQ96DP5 389 aaKnown RBP17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 RIC8BQ9NVN3 520 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 PDS5AQ29RF7 1337 aaKnown RBP17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 TFRCP02786 760 aaKnown RBP17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 EFNA5P52803 228 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 SOX10P56693 466 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 RIPOR1Q6ZS17 1223 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 ACOT1Q86TX2 421 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 TPD52L3Q96J77 140 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 KLHL4Q9C0H6 718 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 ARMCX1Q9P291 453 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 KDM6BO15054 1643 aa17.38■□□□□ 0.37
TSPAN3-201ENST00000267970 GPC1P35052 558 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 SOX6P35712 828 aa17.37■□□□□ 0.37
TSPAN3-201ENST00000267970 KHDRBS2Q5VWX1 349 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms