RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLP1	YOR250C	YMR103C	Q04436	120 aa		4.59	□□□□□ -1.67
CLP1	YOR250C	ENV10	Q99382	181 aa		4.59	□□□□□ -1.67
CLP1	YOR250C	FAS1	P07149	2051 aa	Known RBP	4.59	□□□□□ -1.67
CLP1	YOR250C	YHR214C-D	P0CX93	97 aa		4.58	□□□□□ -1.68
CLP1	YOR250C	MRS3	P10566	314 aa		4.58	□□□□□ -1.68
CLP1	YOR250C	TOM40	P23644	387 aa	Known RBP	4.58	□□□□□ -1.68
CLP1	YOR250C	YAR068W	P39564	161 aa		4.58	□□□□□ -1.68
CLP1	YOR250C	YNL200C	P40165	246 aa	Known RBP	4.58	□□□□□ -1.68
CLP1	YOR250C	YPL073C	P40323	161 aa		4.58	□□□□□ -1.68
CLP1	YOR250C	REE1	P40893	198 aa		4.58	□□□□□ -1.68
CLP1	YOR250C	CWP2	P43497	92 aa		4.58	□□□□□ -1.68
CLP1	YOR250C	PGU1	P47180	361 aa		4.58	□□□□□ -1.68
CLP1	YOR250C	UBC13	P52490	153 aa		4.58	□□□□□ -1.68
CLP1	YOR250C	SDS23	P53172	527 aa		4.58	□□□□□ -1.68
CLP1	YOR250C	POP3	P53833	195 aa	Predicted RBP	4.58	□□□□□ -1.68
CLP1	YOR250C	DFM1	Q12743	341 aa	Known RBP	4.58	□□□□□ -1.68
CLP1	YOR250C	YMR316C-A	I2HB70	103 aa		4.57	□□□□□ -1.68
CLP1	YOR250C	TRP1	P00912	224 aa		4.57	□□□□□ -1.68
CLP1	YOR250C	HSP12	P22943	109 aa	Known RBP	4.57	□□□□□ -1.68
CLP1	YOR250C	FPR2	P32472	135 aa		4.57	□□□□□ -1.68
CLP1	YOR250C	NHP2	P32495	156 aa	Predicted RBP	4.57	□□□□□ -1.68
CLP1	YOR250C	ECM14	P38836	430 aa		4.57	□□□□□ -1.68
CLP1	YOR250C	PEX22	P39718	180 aa		4.57	□□□□□ -1.68
CLP1	YOR250C	SFT1	P43682	97 aa		4.57	□□□□□ -1.68
CLP1	YOR250C	NCE102	Q12207	173 aa	RIP-Chip data	4.57	□□□□□ -1.68	not detected
CLP1	YOR250C	JID1	Q12350	301 aa		4.57	□□□□□ -1.68
CLP1	YOR250C	BRR2	P32639	2163 aa	Known RBP	4.57	□□□□□ -1.68
CLP1	YOR250C	RPL23A	P0CX41	137 aa	Known RBP	4.56	□□□□□ -1.68
CLP1	YOR250C	RPL23B	P0CX42	137 aa	Known RBP	4.56	□□□□□ -1.68
CLP1	YOR250C	YKL097C	P34245	136 aa		4.56	□□□□□ -1.68
CLP1	YOR250C	VHS2	P40463	436 aa		4.56	□□□□□ -1.68
CLP1	YOR250C	OST1	P41543	476 aa	Known RBP	4.56	□□□□□ -1.68
CLP1	YOR250C	EGT2	P42835	1041 aa		4.56	□□□□□ -1.68
CLP1	YOR250C	HSK3	P69852	69 aa		4.56	□□□□□ -1.68
CLP1	YOR250C	FCF1	Q05498	189 aa	Predicted RBP	4.56	□□□□□ -1.68
CLP1	YOR250C	COX17	Q12287	69 aa		4.56	□□□□□ -1.68
CLP1	YOR250C	HTL1	Q9URQ5	78 aa		4.56	□□□□□ -1.68
CLP1	YOR250C	RPL2A	P0CX45	254 aa	Known RBP	4.55	□□□□□ -1.68
CLP1	YOR250C	RPL2B	P0CX46	254 aa	Known RBP	4.55	□□□□□ -1.68
CLP1	YOR250C	NRG2	P38082	220 aa		4.55	□□□□□ -1.68
CLP1	YOR250C	YHP1	Q04116	353 aa		4.55	□□□□□ -1.68
CLP1	YOR250C	FIT2	Q08906	153 aa		4.55	□□□□□ -1.68
CLP1	YOR250C	YKL023C-A	Q2V2P3	75 aa		4.55	□□□□□ -1.68
CLP1	YOR250C	SPO24	Q3E752	67 aa		4.55	□□□□□ -1.68
CLP1	YOR250C	IGO2	Q9P305	131 aa		4.55	□□□□□ -1.68
CLP1	YOR250C	POL2	P21951	2222 aa	Known RBP	4.54	□□□□□ -1.68
CLP1	YOR250C	ACC1	Q00955	2233 aa	Known RBP	4.54	□□□□□ -1.68
CLP1	YOR250C	PIS1	P06197	220 aa	Known RBP	4.54	□□□□□ -1.68
CLP1	YOR250C	MRPL31	P14063	131 aa	Predicted RBP	4.54	□□□□□ -1.68
CLP1	YOR250C	TOM6	P33448	61 aa		4.54	□□□□□ -1.68
CLP1	YOR250C	MID2	P36027	376 aa		4.54	□□□□□ -1.68
CLP1	YOR250C	YKL044W	P36092	106 aa		4.54	□□□□□ -1.68
CLP1	YOR250C	PAU7	P39545	55 aa		4.54	□□□□□ -1.68
CLP1	YOR250C	YGR219W	P53307	113 aa		4.54	□□□□□ -1.68
CLP1	YOR250C	YLR296W	Q05898	108 aa		4.54	□□□□□ -1.68
CLP1	YOR250C	YDL218W	Q07629	317 aa		4.54	□□□□□ -1.68
CLP1	YOR250C	RRS1	Q08746	203 aa	Known RBP	4.54	□□□□□ -1.68
CLP1	YOR250C	TIM18	Q08749	192 aa		4.54	□□□□□ -1.68
CLP1	YOR250C	YIL046W-A	Q3E7Z4	54 aa		4.54	□□□□□ -1.68
CLP1	YOR250C	YFL041W-A	Q3E817	63 aa		4.54	□□□□□ -1.68
CLP1	YOR250C	SEC16	P48415	2195 aa	Known RBP	4.54	□□□□□ -1.68
CLP1	YOR250C	TOR1	P35169	2470 aa		4.54	□□□□□ -1.68
CLP1	YOR250C	YCR006C	P25350	157 aa		4.53	□□□□□ -1.68
CLP1	YOR250C	FZF1	P32805	299 aa		4.53	□□□□□ -1.68
CLP1	YOR250C	YPI1	P43587	155 aa		4.53	□□□□□ -1.68
CLP1	YOR250C	RPL15B	P54780	204 aa	Predicted RBP	4.53	□□□□□ -1.68
CLP1	YOR250C	IRC25	Q07951	179 aa		4.53	□□□□□ -1.68
CLP1	YOR250C	YBL112C	Q3E7Y4	105 aa		4.53	□□□□□ -1.68
CLP1	YOR250C	YHL018W	P38744	120 aa	Predicted RBP	4.52	□□□□□ -1.69
CLP1	YOR250C	MST28	P39552	234 aa		4.52	□□□□□ -1.69
CLP1	YOR250C	KNH1	P50112	268 aa		4.52	□□□□□ -1.69
CLP1	YOR250C	TOM7	P53507	60 aa		4.52	□□□□□ -1.69
CLP1	YOR250C	API2	Q04413	109 aa		4.52	□□□□□ -1.69
CLP1	YOR250C	AYT1	Q12226	474 aa		4.52	□□□□□ -1.69
CLP1	YOR250C	FAB1	P34756	2278 aa		4.52	□□□□□ -1.69
CLP1	YOR250C	APS1	P35181	156 aa		4.51	□□□□□ -1.69
CLP1	YOR250C	CSH1	P38287	376 aa		4.51	□□□□□ -1.69
CLP1	YOR250C	HUA1	P40325	198 aa		4.51	□□□□□ -1.69
CLP1	YOR250C	COX12	Q01519	83 aa		4.51	□□□□□ -1.69
CLP1	YOR250C	YDR042C	Q03205	200 aa		4.51	□□□□□ -1.69
CLP1	YOR250C	MIX14	Q04341	121 aa		4.51	□□□□□ -1.69
CLP1	YOR250C	SHH4	Q06236	168 aa		4.51	□□□□□ -1.69
CLP1	YOR250C	HPA2	Q06592	156 aa		4.51	□□□□□ -1.69
CLP1	YOR250C	SRL1	Q08673	210 aa		4.51	□□□□□ -1.69
CLP1	YOR250C	YOR032W-A	Q8TGS1	66 aa		4.51	□□□□□ -1.69
CLP1	YOR250C	NUM1	Q00402	2748 aa		4.51	□□□□□ -1.69
CLP1	YOR250C	YCR050C	P25630	102 aa		4.5	□□□□□ -1.69
CLP1	YOR250C	SFT2	P38166	215 aa		4.5	□□□□□ -1.69
CLP1	YOR250C	YHL042W	P38729	150 aa		4.5	□□□□□ -1.69
CLP1	YOR250C	FIP1	P45976	327 aa		4.5	□□□□□ -1.69
CLP1	YOR250C	MIX17	Q03667	156 aa		4.5	□□□□□ -1.69
CLP1	YOR250C	YDR034W-B	Q6Q5X2	51 aa		4.5	□□□□□ -1.69
CLP1	YOR250C	YER175W-A	Q8TGU4	54 aa		4.5	□□□□□ -1.69
CLP1	YOR250C	SVP26	P38869	228 aa		4.49	□□□□□ -1.69
CLP1	YOR250C	YIL014C-A	Q02598	104 aa		4.49	□□□□□ -1.69
CLP1	YOR250C	YMR317W	Q04893	1140 aa		4.49	□□□□□ -1.69
CLP1	YOR250C	DAD1	Q12248	94 aa		4.49	□□□□□ -1.69
CLP1	YOR250C	YDR119W-A	Q2V2P9	66 aa		4.49	□□□□□ -1.69
CLP1	YOR250C	KSH1	Q8TGJ3	72 aa		4.49	□□□□□ -1.69
CLP1	YOR250C	YCR022C	P25620	114 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms