RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C YMR082CQ04276 118 aa2.21□□□□□ -2.06
SSN8YNL025C YLR296WQ05898 108 aa2.21□□□□□ -2.06
SSN8YNL025C YDL241WQ07738 123 aa2.21□□□□□ -2.06
SSN8YNL025C YPL261CQ08976 102 aa2.21□□□□□ -2.06
SSN8YNL025C RPS25AQ3E792 108 aaPredicted RBP2.21□□□□□ -2.06
SSN8YNL025C YOR093CQ12275 1648 aa2.2□□□□□ -2.06
SSN8YNL025C YHL018WP38744 120 aaPredicted RBP2.2□□□□□ -2.06
SSN8YNL025C YEL067CP39978 195 aa2.2□□□□□ -2.06
SSN8YNL025C HPA3P39979 161 aa2.2□□□□□ -2.06
SSN8YNL025C SPO73P40031 143 aa2.2□□□□□ -2.06
SSN8YNL025C YNR077CP53758 84 aa2.2□□□□□ -2.06
SSN8YNL025C YDR114CQ04597 100 aa2.2□□□□□ -2.06
SSN8YNL025C PIN3Q06449 215 aa2.2□□□□□ -2.06
SSN8YNL025C YPR153WQ06537 140 aa2.2□□□□□ -2.06
SSN8YNL025C GPI11Q06636 219 aa2.2□□□□□ -2.06
SSN8YNL025C YMR030W-AQ3E760 96 aa2.2□□□□□ -2.06
SSN8YNL025C DOP1Q03921 1698 aa2.2□□□□□ -2.06
SSN8YNL025C TY2B-LR1P0C2J3 1770 aa2.2□□□□□ -2.06
SSN8YNL025C TY2B-FP0CX63 1770 aa2.2□□□□□ -2.06
SSN8YNL025C TY2B-GR2P0CX64 1770 aa2.2□□□□□ -2.06
SSN8YNL025C TY2B-CP25384 1770 aa2.2□□□□□ -2.06
SSN8YNL025C TY2B-DR2Q03494 1770 aa2.2□□□□□ -2.06
SSN8YNL025C TY1B-DR1Q03855 1755 aa2.2□□□□□ -2.06
SSN8YNL025C TY2B-DR3Q07791 1770 aaKnown RBP2.2□□□□□ -2.06
SSN8YNL025C TY2B-OR1Q12113 1770 aa2.2□□□□□ -2.06
SSN8YNL025C TY2B-DR1Q12472 1770 aa2.2□□□□□ -2.06
SSN8YNL025C TY2B-OR2Q12501 1770 aa2.2□□□□□ -2.06
SSN8YNL025C DNF3Q12674 1656 aa2.19□□□□□ -2.06
SSN8YNL025C TY2B-BQ12491 1770 aa2.19□□□□□ -2.06
SSN8YNL025C VTH1P40438 1549 aa2.19□□□□□ -2.06
SSN8YNL025C VTH2P40890 1549 aa2.19□□□□□ -2.06
SSN8YNL025C RPL36BO14455 100 aaKnown RBP2.19□□□□□ -2.06
SSN8YNL025C RPL26AP05743 127 aaKnown RBP2.19□□□□□ -2.06
SSN8YNL025C RPL36AP05745 100 aaPredicted RBP2.19□□□□□ -2.06
SSN8YNL025C SEC11P15367 167 aa2.19□□□□□ -2.06
SSN8YNL025C YHR138CP38841 114 aaPredicted RBP2.19□□□□□ -2.06
SSN8YNL025C SVP26P38869 228 aa2.19□□□□□ -2.06
SSN8YNL025C YER187WP40102 141 aa2.19□□□□□ -2.06
SSN8YNL025C DCV1P43595 202 aa2.19□□□□□ -2.06
SSN8YNL025C BOL2P53082 120 aa2.19□□□□□ -2.06
SSN8YNL025C YGL149WP53116 101 aa2.19□□□□□ -2.06
SSN8YNL025C RPL26BP53221 127 aaKnown RBP2.19□□□□□ -2.06
SSN8YNL025C YLR363W-AQ3E747 85 aa2.19□□□□□ -2.06
SSN8YNL025C OST5Q92316 86 aa2.19□□□□□ -2.06
SSN8YNL025C MSB2P32334 1306 aa2.18□□□□□ -2.06
SSN8YNL025C MRPS9P38120 278 aa2.18□□□□□ -2.06
SSN8YNL025C YHR022CP38763 256 aa2.18□□□□□ -2.06
SSN8YNL025C BRP1P53194 125 aa2.18□□□□□ -2.06
SSN8YNL025C EMC6Q12431 108 aa2.18□□□□□ -2.06
SSN8YNL025C YHR213W-AQ8TGT4 77 aa2.18□□□□□ -2.06
SSN8YNL025C CCH1P50077 2039 aa2.18□□□□□ -2.06
SSN8YNL025C FUN14P18411 198 aa2.17□□□□□ -2.06
SSN8YNL025C YEL045CP32616 141 aa2.17□□□□□ -2.06
SSN8YNL025C DAN1P47178 298 aa2.17□□□□□ -2.06
SSN8YNL025C SNN1P48232 102 aa2.17□□□□□ -2.06
SSN8YNL025C RPL22BP56628 122 aaKnown RBP2.17□□□□□ -2.06
SSN8YNL025C YPR195CQ06594 109 aa2.17□□□□□ -2.06
SSN8YNL025C RPA190P10964 1664 aaKnown RBP2.17□□□□□ -2.06
SSN8YNL025C TY1B-DR5P0C2I2 1755 aa2.17□□□□□ -2.06
SSN8YNL025C TY1B-DR6P0C2I3 1755 aa2.17□□□□□ -2.06
SSN8YNL025C TY1B-LR2P0C2I5 1755 aa2.17□□□□□ -2.06
SSN8YNL025C TY1B-LR3P0C2I6 1755 aaKnown RBP2.17□□□□□ -2.06
SSN8YNL025C TY1B-PR1P0C2I9 1755 aaKnown RBP2.17□□□□□ -2.06
SSN8YNL025C TY1B-PR2P0C2J0 1756 aa2.17□□□□□ -2.06
SSN8YNL025C TY1B-PR3P0C2J1 1755 aaKnown RBP2.17□□□□□ -2.06
SSN8YNL025C TY1B-JR1P47098 1755 aa2.17□□□□□ -2.06
SSN8YNL025C TY1B-ML2Q03434 1755 aaKnown RBP2.17□□□□□ -2.06
SSN8YNL025C TY1B-ER1Q03612 1755 aa2.17□□□□□ -2.06
SSN8YNL025C TY1B-ML1Q04711 1755 aaKnown RBP2.17□□□□□ -2.06
SSN8YNL025C TY1B-GR2Q12269 1755 aa2.17□□□□□ -2.06
SSN8YNL025C TY1B-OLQ12273 1755 aa2.17□□□□□ -2.06
SSN8YNL025C TY1B-PLQ12414 1755 aaKnown RBP2.17□□□□□ -2.06
SSN8YNL025C SOD1P00445 154 aaKnown RBP2.16□□□□□ -2.06
SSN8YNL025C COX8P04039 78 aa2.16□□□□□ -2.06
SSN8YNL025C STF2P16965 84 aa2.16□□□□□ -2.06
SSN8YNL025C YKR045CP36138 183 aa2.16□□□□□ -2.06
SSN8YNL025C LSM2P38203 95 aaKnown RBP2.16□□□□□ -2.06
SSN8YNL025C YHL005CP38752 130 aa2.16□□□□□ -2.06
SSN8YNL025C GCV3P39726 170 aaPredicted RBP2.16□□□□□ -2.06
SSN8YNL025C POP3P53833 195 aaPredicted RBP2.16□□□□□ -2.06
SSN8YNL025C YHR007C-AQ07074 71 aa2.16□□□□□ -2.06
SSN8YNL025C VPS68Q12016 184 aa2.16□□□□□ -2.06
SSN8YNL025C MLP1Q02455 1875 aaKnown RBP2.16□□□□□ -2.06
SSN8YNL025C CHC1P22137 1653 aaKnown RBP2.15□□□□□ -2.06
SSN8YNL025C VMR1P38735 1592 aa2.15□□□□□ -2.06
SSN8YNL025C YCR085WP25650 117 aa2.15□□□□□ -2.07
SSN8YNL025C YEL014CP39999 101 aa2.15□□□□□ -2.07
SSN8YNL025C CWP2P43497 92 aa2.15□□□□□ -2.07
SSN8YNL025C YIL014C-AQ02598 104 aa2.15□□□□□ -2.07
SSN8YNL025C YDR042CQ03205 200 aa2.15□□□□□ -2.07
SSN8YNL025C HPA2Q06592 156 aa2.15□□□□□ -2.07
SSN8YNL025C PCC1Q3E833 88 aa2.15□□□□□ -2.07
SSN8YNL025C TY1B-JR2P47100 1755 aaKnown RBP2.14□□□□□ -2.07
SSN8YNL025C TY1B-ER2Q03619 1755 aa2.14□□□□□ -2.07
SSN8YNL025C TY1B-MR1Q04214 1755 aa2.14□□□□□ -2.07
SSN8YNL025C TY1B-MR2Q04670 1755 aaKnown RBP2.14□□□□□ -2.07
SSN8YNL025C TY1B-LR1Q12088 1755 aaKnown RBP2.14□□□□□ -2.07
SSN8YNL025C TY1B-NL1Q12112 1755 aa2.14□□□□□ -2.07
SSN8YNL025C TY1B-GR1Q12141 1755 aa2.14□□□□□ -2.07
SSN8YNL025C TY1B-BLQ12490 1755 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms