RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C YPL229WQ99395 206 aa3.21□□□□□ -1.9
SRP40YKR092C BET1P22804 142 aa3.2□□□□□ -1.9
SRP40YKR092C MRPS9P38120 278 aa3.2□□□□□ -1.9
SRP40YKR092C SWD3P38123 315 aa3.2□□□□□ -1.9
SRP40YKR092C YBR292CP38357 123 aa3.2□□□□□ -1.9
SRP40YKR092C PAU5P43575 122 aa3.2□□□□□ -1.9
SRP40YKR092C WWM1P43582 211 aaKnown RBP3.2□□□□□ -1.9
SRP40YKR092C RIM9Q04734 239 aa3.2□□□□□ -1.9
SRP40YKR092C MSA1Q08471 629 aa3.2□□□□□ -1.9
SRP40YKR092C YFL041W-AQ3E817 63 aa3.2□□□□□ -1.9
SRP40YKR092C YHR214C-EQ8TGK0 99 aa3.2□□□□□ -1.9
SRP40YKR092C CCH1P50077 2039 aa3.19□□□□□ -1.9
SRP40YKR092C COX9P07255 59 aa3.19□□□□□ -1.9
SRP40YKR092C LDB16P25587 256 aa3.19□□□□□ -1.9
SRP40YKR092C YHL042WP38729 150 aa3.19□□□□□ -1.9
SRP40YKR092C PTH1P38876 190 aaKnown RBP3.19□□□□□ -1.9
SRP40YKR092C SNF11P38956 169 aa3.19□□□□□ -1.9
SRP40YKR092C KRE9P39005 276 aa3.19□□□□□ -1.9
SRP40YKR092C YNL200CP40165 246 aaKnown RBP3.19□□□□□ -1.9
SRP40YKR092C POC4Q12245 148 aaPredicted RBP3.19□□□□□ -1.9
SRP40YKR092C SCS22Q6Q595 175 aa3.19□□□□□ -1.9
SRP40YKR092C YMR316C-AI2HB70 103 aa3.18□□□□□ -1.9
SRP40YKR092C RPL16AP26784 199 aaKnown RBP3.18□□□□□ -1.9
SRP40YKR092C RPB7P34087 171 aa3.18□□□□□ -1.9
SRP40YKR092C SIM1P40472 476 aa3.18□□□□□ -1.9
SRP40YKR092C MIC27P50945 234 aa3.18□□□□□ -1.9
SRP40YKR092C MIX14Q04341 121 aa3.18□□□□□ -1.9
SRP40YKR092C YLR365WQ7LIF2 110 aa3.18□□□□□ -1.9
SRP40YKR092C MIC10Q96VH5 97 aa3.18□□□□□ -1.9
SRP40YKR092C DDR48P18899 430 aaKnown RBP3.17□□□□□ -1.9
SRP40YKR092C MDH2P22133 377 aa3.17□□□□□ -1.9
SRP40YKR092C YKL097CP34245 136 aa3.17□□□□□ -1.9
SRP40YKR092C FYV4P38783 130 aaPredicted RBP3.17□□□□□ -1.9
SRP40YKR092C HSP10P38910 106 aa3.17□□□□□ -1.9
SRP40YKR092C YGL262WP53054 175 aa3.17□□□□□ -1.9
SRP40YKR092C YGR018CP53211 109 aa3.17□□□□□ -1.9
SRP40YKR092C PCP1P53259 346 aa3.17□□□□□ -1.9
SRP40YKR092C YMR295CQ03559 197 aa3.17□□□□□ -1.9
SRP40YKR092C YDR102CQ03864 110 aa3.17□□□□□ -1.9
SRP40YKR092C YLR296WQ05898 108 aa3.17□□□□□ -1.9
SRP40YKR092C HPA2Q06592 156 aa3.17□□□□□ -1.9
SRP40YKR092C YOR385WQ08909 290 aa3.17□□□□□ -1.9
SRP40YKR092C YDR119W-AQ2V2P9 66 aa3.17□□□□□ -1.9
SRP40YKR092C ODC2Q99297 307 aa3.17□□□□□ -1.9
SRP40YKR092C SLH1P53327 1967 aaKnown RBP3.16□□□□□ -1.9
SRP40YKR092C URA5P13298 226 aaKnown RBP3.16□□□□□ -1.9
SRP40YKR092C YCR041WP37265 110 aa3.16□□□□□ -1.9
SRP40YKR092C YER135CP40082 130 aa3.16□□□□□ -1.9
SRP40YKR092C PIR5P46999 287 aa3.16□□□□□ -1.9
SRP40YKR092C NRM1P53718 249 aa3.16□□□□□ -1.9
SRP40YKR092C HAL1Q01766 294 aa3.16□□□□□ -1.9
SRP40YKR092C YDR042CQ03205 200 aa3.16□□□□□ -1.9
SRP40YKR092C YOR015WQ12169 119 aa3.16□□□□□ -1.9
SRP40YKR092C YOR376W-AQ3E805 51 aa3.16□□□□□ -1.9
SRP40YKR092C RPS8AP0CX39 200 aaKnown RBP3.15□□□□□ -1.91
SRP40YKR092C RPS8BP0CX40 200 aaKnown RBP3.15□□□□□ -1.91
SRP40YKR092C YAL064WP39711 94 aa3.15□□□□□ -1.91
SRP40YKR092C EDC2P40023 145 aaPredicted RBP3.15□□□□□ -1.91
SRP40YKR092C RRT13P40042 185 aa3.15□□□□□ -1.91
SRP40YKR092C YFR035CP43608 114 aa3.15□□□□□ -1.91
SRP40YKR092C LPP1Q04396 274 aa3.15□□□□□ -1.91
SRP40YKR092C YOR105WQ08504 108 aa3.15□□□□□ -1.91
SRP40YKR092C NIP7Q08962 181 aaKnown RBP3.15□□□□□ -1.91
SRP40YKR092C YDR524C-BQ3E6R4 66 aa3.15□□□□□ -1.91
SRP40YKR092C YAL063C-AQ3E791 96 aa3.15□□□□□ -1.91
SRP40YKR092C YPL038W-AQ3E7B4 63 aa3.15□□□□□ -1.91
SRP40YKR092C TDA8Q6B2U8 126 aa3.15□□□□□ -1.91
SRP40YKR092C YML100W-AQ8TGT0 57 aa3.15□□□□□ -1.91
SRP40YKR092C SPS100P13130 326 aa3.14□□□□□ -1.91
SRP40YKR092C YKL044WP36092 106 aa3.14□□□□□ -1.91
SRP40YKR092C MRPL27P36526 146 aaPredicted RBP3.14□□□□□ -1.91
SRP40YKR092C OM14P38325 134 aa3.14□□□□□ -1.91
SRP40YKR092C YNL217WP40152 326 aa3.14□□□□□ -1.91
SRP40YKR092C HUR1P45820 110 aa3.14□□□□□ -1.91
SRP40YKR092C TPC1P53257 314 aa3.14□□□□□ -1.91
SRP40YKR092C YNR064CP53750 290 aa3.14□□□□□ -1.91
SRP40YKR092C SWT21P53873 357 aaPredicted RBP3.14□□□□□ -1.91
SRP40YKR092C ATP19P81451 68 aa3.14□□□□□ -1.91
SRP40YKR092C YOR020W-AQ3E824 90 aa3.14□□□□□ -1.91
SRP40YKR092C YCL021W-AQ96VH3 125 aa3.14□□□□□ -1.91
SRP40YKR092C UMP1P38293 148 aa3.13□□□□□ -1.91
SRP40YKR092C YFL067WP43537 175 aa3.13□□□□□ -1.91
SRP40YKR092C YFL019CP43576 117 aa3.13□□□□□ -1.91
SRP40YKR092C BNS1P50084 137 aa3.13□□□□□ -1.91
SRP40YKR092C COX12Q01519 83 aa3.13□□□□□ -1.91
SRP40YKR092C SYM1Q06563 197 aa3.13□□□□□ -1.91
SRP40YKR092C SMT3Q12306 101 aaKnown RBP3.13□□□□□ -1.91
SRP40YKR092C YLR146W-AQ2V2P1 62 aa3.13□□□□□ -1.91
SRP40YKR092C YDR381C-AQ3E6R5 114 aa3.13□□□□□ -1.91
SRP40YKR092C YCR024C-BQ3E7Z8 88 aa3.13□□□□□ -1.91
SRP40YKR092C YBL008W-AQ3E821 79 aa3.13□□□□□ -1.91
SRP40YKR092C YFR032C-BQ8TGU2 87 aa3.13□□□□□ -1.91
SRP40YKR092C YHR139C-AO13536 103 aa3.12□□□□□ -1.91
SRP40YKR092C MDM35O60200 86 aa3.12□□□□□ -1.91
SRP40YKR092C TIM12P32830 109 aa3.12□□□□□ -1.91
SRP40YKR092C PET8P38921 284 aa3.12□□□□□ -1.91
SRP40YKR092C YAR068WP39564 161 aa3.12□□□□□ -1.91
SRP40YKR092C RSM18P40033 138 aa3.12□□□□□ -1.91
SRP40YKR092C VPS68Q12016 184 aa3.12□□□□□ -1.91
SRP40YKR092C YKL023C-AQ2V2P3 75 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms