RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W YBR126W-AQ8TGU7 68 aa8.66□□□□□ -1.02
TCD2YKL027W RPL16BP26785 198 aaKnown RBP8.65□□□□□ -1.02
TCD2YKL027W ZRT1P32804 376 aa8.65□□□□□ -1.02
TCD2YKL027W RPS22BQ3E7Y3 130 aaKnown RBP8.65□□□□□ -1.02
TCD2YKL027W FRS1P15624 595 aaKnown RBP8.64□□□□□ -1.03
TCD2YKL027W SDS23P53172 527 aa8.64□□□□□ -1.03
TCD2YKL027W AIM34Q03673 198 aa8.64□□□□□ -1.03
TCD2YKL027W VAM10Q08474 114 aa8.64□□□□□ -1.03
TCD2YKL027W YRA2P36036 203 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
TCD2YKL027W DUO1P53168 247 aaKnown RBP8.63□□□□□ -1.03
TCD2YKL027W RDS3Q06835 107 aaPredicted RBP8.63□□□□□ -1.03
TCD2YKL027W YPR053CQ6Q5F3 151 aa8.63□□□□□ -1.03
TCD2YKL027W POR1P04840 283 aaKnown RBP8.62□□□□□ -1.03
TCD2YKL027W RRT13P40042 185 aa8.62□□□□□ -1.03
TCD2YKL027W RPL23AP0CX41 137 aaKnown RBP8.61□□□□□ -1.03
TCD2YKL027W RPL23BP0CX42 137 aaKnown RBP8.61□□□□□ -1.03
TCD2YKL027W YCR001WP25347 104 aa8.61□□□□□ -1.03
TCD2YKL027W SGF11Q03067 99 aa8.61□□□□□ -1.03
TCD2YKL027W ISU2Q12056 156 aa8.61□□□□□ -1.03
TCD2YKL027W YPS5P53057 165 aa8.6□□□□□ -1.03
TCD2YKL027W YCR024C-BQ3E7Z8 88 aa8.6□□□□□ -1.03
TCD2YKL027W TVP18Q04767 167 aa8.59□□□□□ -1.03
TCD2YKL027W DXO1Q06349 442 aa8.59□□□□□ -1.03
TCD2YKL027W FSF1Q12029 327 aaKnown RBP8.59□□□□□ -1.03
TCD2YKL027W MRPL28P36527 147 aa8.57□□□□□ -1.04
TCD2YKL027W CYT2Q00873 224 aa8.57□□□□□ -1.04
TCD2YKL027W WIP1Q2V2P8 89 aa8.57□□□□□ -1.04
TCD2YKL027W SEC4P07560 215 aaKnown RBP8.56□□□□□ -1.04
TCD2YKL027W YGR149WP48236 432 aa8.56□□□□□ -1.04
TCD2YKL027W YLR042CQ07990 161 aa8.56□□□□□ -1.04
TCD2YKL027W SDH8P38345 138 aa8.55□□□□□ -1.04
TCD2YKL027W HAL1Q01766 294 aa8.55□□□□□ -1.04
TCD2YKL027W YGR240C-AQ3E786 66 aa8.55□□□□□ -1.04
TCD2YKL027W RPL42AP0CX27 106 aaKnown RBP8.54□□□□□ -1.04
TCD2YKL027W RPL42BP0CX28 106 aaKnown RBP8.54□□□□□ -1.04
TCD2YKL027W MRPL33P20084 86 aa8.54□□□□□ -1.04
TCD2YKL027W ATP16Q12165 160 aa8.54□□□□□ -1.04
TCD2YKL027W KTI12P34253 313 aaKnown RBP8.54□□□□□ -1.04
TCD2YKL027W YKR032WP36127 104 aa8.54□□□□□ -1.04
TCD2YKL027W YNL217WP40152 326 aa8.54□□□□□ -1.04
TCD2YKL027W ARL3Q02804 198 aa8.54□□□□□ -1.04
TCD2YKL027W YCR023CP25351 611 aa8.53□□□□□ -1.04
TCD2YKL027W TEM1P38987 245 aa8.53□□□□□ -1.04
TCD2YKL027W KRE9P39005 276 aa8.52□□□□□ -1.05
TCD2YKL027W SEC72P39742 193 aaKnown RBP8.52□□□□□ -1.05
TCD2YKL027W YGL118CP53132 145 aa8.51□□□□□ -1.05
TCD2YKL027W DGA1Q08650 418 aa8.51□□□□□ -1.05
TCD2YKL027W PET8P38921 284 aa8.5□□□□□ -1.05
TCD2YKL027W SAL1D6W196 494 aa8.48□□□□□ -1.05
TCD2YKL027W CMC2Q3E7A4 109 aa8.48□□□□□ -1.05
TCD2YKL027W PFY1P07274 126 aa8.47□□□□□ -1.05
TCD2YKL027W DCV1P43595 202 aa8.47□□□□□ -1.05
TCD2YKL027W PMP3P87284 55 aa8.47□□□□□ -1.05
TCD2YKL027W MGR2Q02889 113 aa8.47□□□□□ -1.05
TCD2YKL027W CRC1Q12289 327 aa8.47□□□□□ -1.05
TCD2YKL027W YER076CP40049 302 aa8.46□□□□□ -1.06
TCD2YKL027W CDC40P40968 455 aaPredicted RBP8.46□□□□□ -1.06
TCD2YKL027W ATP23P53722 227 aa8.46□□□□□ -1.06
TCD2YKL027W MED7Q08278 222 aa8.46□□□□□ -1.06
TCD2YKL027W YNL200CP40165 246 aaKnown RBP8.45□□□□□ -1.06
TCD2YKL027W YIL014C-AQ02598 104 aa8.45□□□□□ -1.06
TCD2YKL027W UBC5P15732 148 aa8.44□□□□□ -1.06
TCD2YKL027W GSP1P32835 219 aaKnown RBP8.44□□□□□ -1.06
TCD2YKL027W GSP2P32836 220 aaKnown RBP8.44□□□□□ -1.06
TCD2YKL027W YKR070WP36151 352 aaKnown RBP8.44□□□□□ -1.06
TCD2YKL027W YPR014CQ6B0W2 109 aa8.44□□□□□ -1.06
TCD2YKL027W YPT53P36019 220 aa8.43□□□□□ -1.06
TCD2YKL027W GLO1P50107 326 aa8.43□□□□□ -1.06
TCD2YKL027W CUE4Q04201 117 aaPredicted RBP8.43□□□□□ -1.06
TCD2YKL027W SSS1P35179 80 aa8.42□□□□□ -1.06
TCD2YKL027W YER134CP40081 178 aa8.42□□□□□ -1.06
TCD2YKL027W ERI1P62651 68 aaKnown RBP8.42□□□□□ -1.06
TCD2YKL027W FCF1Q05498 189 aaPredicted RBP8.42□□□□□ -1.06
TCD2YKL027W HTL1Q9URQ5 78 aa8.42□□□□□ -1.06
TCD2YKL027W SPC1P46965 94 aa8.41□□□□□ -1.06
TCD2YKL027W TOS6P48560 102 aa8.41□□□□□ -1.06
TCD2YKL027W ERG27Q12452 347 aaKnown RBP8.41□□□□□ -1.06
TCD2YKL027W AQY1P0CD91 305 aa8.4□□□□□ -1.06
TCD2YKL027W RPR2P40571 144 aa8.4□□□□□ -1.06
TCD2YKL027W MRP49P32388 137 aa8.39□□□□□ -1.07
TCD2YKL027W ERV14P53173 138 aa8.39□□□□□ -1.07
TCD2YKL027W YMR122W-AQ3E842 84 aa8.39□□□□□ -1.07
TCD2YKL027W PRE1P22141 198 aaKnown RBP8.38□□□□□ -1.07
TCD2YKL027W PCL2P25693 308 aa8.38□□□□□ -1.07
TCD2YKL027W OST3P48439 350 aa8.38□□□□□ -1.07
TCD2YKL027W YOR008C-AQ3E7B9 74 aa8.38□□□□□ -1.07
TCD2YKL027W ARC15P40518 154 aaRIP-Chip data8.36□□□□□ -1.07not detected
TCD2YKL027W DPP1Q05521 289 aa8.36□□□□□ -1.07
TCD2YKL027W RPL16AP26784 199 aaKnown RBP8.35□□□□□ -1.07
TCD2YKL027W SOH1P38633 127 aa8.35□□□□□ -1.07
TCD2YKL027W YJR146WP47174 117 aa8.35□□□□□ -1.07
TCD2YKL027W YDR042CQ03205 200 aa8.35□□□□□ -1.07
TCD2YKL027W COA6Q3E846 104 aa8.35□□□□□ -1.07
TCD2YKL027W URM1P40554 99 aaPredicted RBP8.34□□□□□ -1.07
TCD2YKL027W POP3P53833 195 aaPredicted RBP8.34□□□□□ -1.07
TCD2YKL027W PKR1Q03880 122 aaKnown RBP8.34□□□□□ -1.07
TCD2YKL027W TRP1P00912 224 aa8.33□□□□□ -1.08
TCD2YKL027W ADH2P00331 348 aaKnown RBP8.32□□□□□ -1.08
TCD2YKL027W RPL27BP0C2H7 136 aaKnown RBP8.32□□□□□ -1.08
TCD2YKL027W MRPL11P36521 249 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 112.4 ms