RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI3YJL176C ISU2Q12056 156 aa3.38□□□□□ -1.87
SWI3YJL176C TY1A-GR1Q12085 440 aa3.38□□□□□ -1.87
SWI3YJL176C POM33Q12164 279 aa3.38□□□□□ -1.87
SWI3YJL176C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.38□□□□□ -1.87
SWI3YJL176C TY1A-OLQ92392 440 aaKnown RBP3.38□□□□□ -1.87
SWI3YJL176C PAM17P36147 197 aa3.38□□□□□ -1.87
SWI3YJL176C SUR2P38992 349 aa3.38□□□□□ -1.87
SWI3YJL176C YNL217WP40152 326 aa3.38□□□□□ -1.87
SWI3YJL176C ARC18Q05933 178 aaKnown RBP3.38□□□□□ -1.87
SWI3YJL176C ZEO1Q08245 113 aa3.38□□□□□ -1.87
SWI3YJL176C ZRT1P32804 376 aa3.37□□□□□ -1.87
SWI3YJL176C YLR042CQ07990 161 aa3.37□□□□□ -1.87
SWI3YJL176C KRE9P39005 276 aa3.37□□□□□ -1.87
SWI3YJL176C HHO1P53551 258 aa3.37□□□□□ -1.87
SWI3YJL176C CRC1Q12289 327 aa3.37□□□□□ -1.87
SWI3YJL176C RPR2P40571 144 aa3.36□□□□□ -1.87
SWI3YJL176C SDS23P53172 527 aa3.36□□□□□ -1.87
SWI3YJL176C YCR023CP25351 611 aa3.36□□□□□ -1.87
SWI3YJL176C TEM1P38987 245 aa3.36□□□□□ -1.87
SWI3YJL176C TVP18Q04767 167 aa3.36□□□□□ -1.87
SWI3YJL176C DGA1Q08650 418 aa3.36□□□□□ -1.87
SWI3YJL176C ATP23P53722 227 aa3.35□□□□□ -1.87
SWI3YJL176C PAU19P0CE85 124 aa3.35□□□□□ -1.87
SWI3YJL176C PAU21P0CE86 164 aa3.35□□□□□ -1.87
SWI3YJL176C PAU22P0CE87 164 aa3.35□□□□□ -1.87
SWI3YJL176C RPL42AP0CX27 106 aaKnown RBP3.35□□□□□ -1.87
SWI3YJL176C RPL42BP0CX28 106 aaKnown RBP3.35□□□□□ -1.87
SWI3YJL176C PAU3P25610 124 aa3.35□□□□□ -1.87
SWI3YJL176C NSE4P43124 402 aa3.35□□□□□ -1.87
SWI3YJL176C RPS22BQ3E7Y3 130 aaKnown RBP3.35□□□□□ -1.87
SWI3YJL176C RPL23AP0CX41 137 aaKnown RBP3.34□□□□□ -1.87
SWI3YJL176C RPL23BP0CX42 137 aaKnown RBP3.34□□□□□ -1.87
SWI3YJL176C YPT53P36019 220 aa3.34□□□□□ -1.87
SWI3YJL176C YBR013CP38215 129 aa3.34□□□□□ -1.87
SWI3YJL176C SPC1P46965 94 aa3.34□□□□□ -1.87
SWI3YJL176C YGR149WP48236 432 aa3.34□□□□□ -1.87
SWI3YJL176C SDH8P38345 138 aa3.34□□□□□ -1.88
SWI3YJL176C GTT1P40582 234 aa3.34□□□□□ -1.88
SWI3YJL176C PMP3P87284 55 aa3.34□□□□□ -1.88
SWI3YJL176C FSF1Q12029 327 aaKnown RBP3.34□□□□□ -1.88
SWI3YJL176C WIP1Q2V2P8 89 aa3.34□□□□□ -1.88
SWI3YJL176C KTI12P34253 313 aaKnown RBP3.33□□□□□ -1.88
SWI3YJL176C CDC40P40968 455 aaPredicted RBP3.33□□□□□ -1.88
SWI3YJL176C YKR032WP36127 104 aa3.32□□□□□ -1.88
SWI3YJL176C DCV1P43595 202 aa3.32□□□□□ -1.88
SWI3YJL176C ERI1P62651 68 aaKnown RBP3.32□□□□□ -1.88
SWI3YJL176C YCR024C-BQ3E7Z8 88 aa3.32□□□□□ -1.88
SWI3YJL176C POR1P04840 283 aaKnown RBP3.32□□□□□ -1.88
SWI3YJL176C SEC4P07560 215 aaKnown RBP3.32□□□□□ -1.88
SWI3YJL176C UBC5P15732 148 aa3.32□□□□□ -1.88
SWI3YJL176C DPP1Q05521 289 aa3.31□□□□□ -1.88
SWI3YJL176C MDN1Q12019 4910 aaKnown RBP3.31□□□□□ -1.88
SWI3YJL176C SAL1D6W196 494 aa3.31□□□□□ -1.88
SWI3YJL176C PET8P38921 284 aa3.31□□□□□ -1.88
SWI3YJL176C YER076CP40049 302 aa3.3□□□□□ -1.88
SWI3YJL176C PBA1Q05778 276 aa3.3□□□□□ -1.88
SWI3YJL176C YMR122W-AQ3E842 84 aa3.3□□□□□ -1.88
SWI3YJL176C PFY1P07274 126 aa3.3□□□□□ -1.88
SWI3YJL176C MRP49P32388 137 aa3.3□□□□□ -1.88
SWI3YJL176C SEC72P39742 193 aaKnown RBP3.3□□□□□ -1.88
SWI3YJL176C ARC15P40518 154 aaRIP-Chip data3.3□□□□□ -1.88not detected
SWI3YJL176C YJL028WP47062 111 aa3.3□□□□□ -1.88
SWI3YJL176C CYT2Q00873 224 aa3.3□□□□□ -1.88
SWI3YJL176C YPR010C-AA5Z2X5 72 aa3.29□□□□□ -1.88
SWI3YJL176C RPL11AP0C0W9 174 aaKnown RBP3.29□□□□□ -1.88
SWI3YJL176C YKR070WP36151 352 aaKnown RBP3.29□□□□□ -1.88
SWI3YJL176C GLO1P50107 326 aa3.29□□□□□ -1.88
SWI3YJL176C RPL11BQ3E757 174 aaPredicted RBP3.29□□□□□ -1.88
SWI3YJL176C RTC6O14464 93 aa3.29□□□□□ -1.88
SWI3YJL176C RPL33AP05744 107 aaKnown RBP3.29□□□□□ -1.88
SWI3YJL176C RPL33BP41056 107 aaKnown RBP3.29□□□□□ -1.88
SWI3YJL176C MGR2Q02889 113 aa3.29□□□□□ -1.88
SWI3YJL176C YML108WQ03759 105 aa3.29□□□□□ -1.88
SWI3YJL176C YLL066W-BQ8TGJ7 56 aa3.29□□□□□ -1.88
SWI3YJL176C YIL059CP40520 121 aa3.28□□□□□ -1.88
SWI3YJL176C YGL118CP53132 145 aa3.28□□□□□ -1.88
SWI3YJL176C YPR014CQ6B0W2 109 aa3.28□□□□□ -1.88
SWI3YJL176C YBR209WP38311 105 aa3.28□□□□□ -1.88
SWI3YJL176C YNL200CP40165 246 aaKnown RBP3.28□□□□□ -1.88
SWI3YJL176C YIL014C-AQ02598 104 aa3.28□□□□□ -1.88
SWI3YJL176C ERG27Q12452 347 aaKnown RBP3.28□□□□□ -1.88
SWI3YJL176C AQY1P0CD91 305 aa3.27□□□□□ -1.89
SWI3YJL176C SVP26P38869 228 aa3.27□□□□□ -1.89
SWI3YJL176C ADH2P00331 348 aaKnown RBP3.27□□□□□ -1.89
SWI3YJL176C RPL16AP26784 199 aaKnown RBP3.27□□□□□ -1.89
SWI3YJL176C YJR146WP47174 117 aa3.27□□□□□ -1.89
SWI3YJL176C TOS6P48560 102 aa3.27□□□□□ -1.89
SWI3YJL176C YGL088WP53151 121 aa3.27□□□□□ -1.89
SWI3YJL176C TIM11P81449 96 aaPredicted RBP3.27□□□□□ -1.89
SWI3YJL176C FCF1Q05498 189 aaPredicted RBP3.27□□□□□ -1.89
SWI3YJL176C YPR195CQ06594 109 aa3.27□□□□□ -1.89
SWI3YJL176C YOR008C-AQ3E7B9 74 aa3.27□□□□□ -1.89
SWI3YJL176C DIF1O13577 133 aa3.26□□□□□ -1.89
SWI3YJL176C TRP1P00912 224 aa3.26□□□□□ -1.89
SWI3YJL176C PRE1P22141 198 aaKnown RBP3.26□□□□□ -1.89
SWI3YJL176C PCL2P25693 308 aa3.26□□□□□ -1.89
SWI3YJL176C AIM29P36154 155 aa3.26□□□□□ -1.89
SWI3YJL176C ERG28P40030 148 aa3.26□□□□□ -1.89
SWI3YJL176C ARL3Q02804 198 aa3.26□□□□□ -1.89
SWI3YJL176C YMR320WQ04897 101 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 51.4 ms