RNA–Protein interactions for RNA: YJL089W

SIP4, Transcript of C6 zinc cluster transcriptional activator, yeast

Gene SIP4, Length 2,490 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP4	YJL089W	YAR029W	P39549	74 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	PAU5	P43575	122 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	JAC1	P53193	184 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	YGR017W	P53210	297 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	GPI19	Q04082	140 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	GIM5	Q04493	163 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	DPP1	Q05521	289 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	DGA1	Q08650	418 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	POM33	Q12164	279 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	DFM1	Q12743	341 aa	Known RBP	0.8	□□□□□ -2.28
SIP4	YJL089W	YBR182C-A	Q8TGU6	64 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	YOL085C	Q99345	113 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	MRPL31	P14063	131 aa	Predicted RBP	0.8	□□□□□ -2.28
SIP4	YJL089W	LAC1	P28496	418 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	RIB5	P38145	238 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	YMR141C	P40211	102 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	POG1	P40473	351 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	DAN1	P47178	298 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	ARC18	Q05933	178 aa	Known RBP	0.8	□□□□□ -2.28
SIP4	YJL089W	MHR1	Q06630	226 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	CSM4	Q08955	156 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	SMT3	Q12306	101 aa	Known RBP	0.8	□□□□□ -2.28
SIP4	YJL089W	DCN1	Q12395	269 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	YGL194C-A	Q2V2P6	80 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	FMP49	A0A023PZB3	126 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	RPL16A	P26784	199 aa	Known RBP	0.79	□□□□□ -2.28
SIP4	YJL089W	HOT13	P36078	116 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	RPL14A	P36105	138 aa	Known RBP	0.79	□□□□□ -2.28
SIP4	YJL089W	RPL14B	P38754	138 aa	Known RBP	0.79	□□□□□ -2.28
SIP4	YJL089W	SRP14	P38985	146 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	YIL163C	P40448	117 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	ARC15	P40518	154 aa	RIP-Chip data	0.79	□□□□□ -2.28	not detected
SIP4	YJL089W	YGR149W	P48236	432 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	OST3	P48439	350 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	DAD3	P69850	94 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	APS2	Q00381	147 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	LCL1	Q02786	101 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	PLP1	Q04004	230 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	TVP18	Q04767	167 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	GTO3	Q04806	366 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	YPR195C	Q06594	109 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	LCL2	Q08045	131 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	YOP1	Q12402	180 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	YAR023C	D6VPM8	179 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	TRP1	P00912	224 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	YDR034C-A	P0C289	58 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	NHP6A	P11632	93 aa	Known RBP	0.79	□□□□□ -2.28
SIP4	YJL089W	SRB6	P32570	121 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	FZF1	P32805	299 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	RPB11	P38902	120 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	VMA7	P39111	118 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	YER076C	P40049	302 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	RPC10	P40422	70 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	DCV1	P43595	202 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	SNN1	P48232	102 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	YDR115W	Q04598	105 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	YMR320W	Q04897	101 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	YLR194C	Q05777	254 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	YDL241W	Q07738	123 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	YLR118C	Q12354	227 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	ERG27	Q12452	347 aa	Known RBP	0.79	□□□□□ -2.28
SIP4	YJL089W	YMR175W-A	Q3E766	64 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	VMA9	Q3E7B6	73 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	YCL001W-B	Q96VH2	84 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	ENV10	Q99382	181 aa		0.79	□□□□□ -2.28
SIP4	YJL089W	ADH3	P07246	375 aa	Known RBP	0.78	□□□□□ -2.28
SIP4	YJL089W	PFY1	P07274	126 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	ZRT1	P32804	376 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	YKR070W	P36151	352 aa	Known RBP	0.78	□□□□□ -2.28
SIP4	YJL089W	RPF1	P38805	295 aa	Known RBP	0.78	□□□□□ -2.28
SIP4	YJL089W	SVP26	P38869	228 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	SEC72	P39742	193 aa	Known RBP	0.78	□□□□□ -2.28
SIP4	YJL089W	PGD1	P40356	397 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	YIL024C	P40543	189 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	SDS23	P53172	527 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	THG1	P53215	237 aa	Known RBP	0.78	□□□□□ -2.28
SIP4	YJL089W	DXO1	Q06349	442 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	NAT3	Q06504	195 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	YDR029W	Q12111	104 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	SNU23	Q12368	194 aa	Predicted RBP	0.78	□□□□□ -2.28
SIP4	YJL089W	YGL041C-B	Q3E750	60 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.78	□□□□□ -2.28
SIP4	YJL089W	SDH8	P38345	138 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	VTC1	P40046	129 aa	RIP-Chip data	0.78	□□□□□ -2.28	not detected
SIP4	YJL089W	HUA1	P40325	198 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	PAU15	P40585	124 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	CIN5	P40917	295 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	HIT1	P46973	164 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	TOS6	P48560	102 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	MGR2	Q02889	113 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	FMP16	Q12497	93 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	YLR307C-A	Q3E825	87 aa		0.78	□□□□□ -2.28
SIP4	YJL089W	DIF1	O13577	133 aa		0.77	□□□□□ -2.29
SIP4	YJL089W	AQY1	P0CD91	305 aa		0.77	□□□□□ -2.29
SIP4	YJL089W	ARO2	P28777	376 aa	Known RBP	0.77	□□□□□ -2.29
SIP4	YJL089W	YJR146W	P47174	117 aa		0.77	□□□□□ -2.29
SIP4	YJL089W	BNS1	P50084	137 aa		0.77	□□□□□ -2.29
SIP4	YJL089W	PKR1	Q03880	122 aa	Known RBP	0.77	□□□□□ -2.29
SIP4	YJL089W	YOR008C-A	Q3E7B9	74 aa		0.77	□□□□□ -2.29
SIP4	YJL089W	Q0142	Q9ZZW4	58 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms