RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W OST3P48439 350 aa8.54□□□□□ -1.04
SNF6YHL025W YDR366CP87287 132 aa8.54□□□□□ -1.04
SNF6YHL025W YBR200W-AQ3E755 54 aa8.54□□□□□ -1.04
SNF6YHL025W COA6Q3E846 104 aa8.54□□□□□ -1.04
SNF6YHL025W RPL2AP0CX45 254 aaKnown RBP8.53□□□□□ -1.04
SNF6YHL025W RPL2BP0CX46 254 aaKnown RBP8.53□□□□□ -1.04
SNF6YHL025W RPS11AP0CX47 156 aaKnown RBP8.52□□□□□ -1.05
SNF6YHL025W RPS11BP0CX48 156 aaKnown RBP8.52□□□□□ -1.05
SNF6YHL025W TEM1P38987 245 aa8.52□□□□□ -1.05
SNF6YHL025W BRP1P53194 125 aa8.52□□□□□ -1.05
SNF6YHL025W SEN15Q04675 128 aa8.52□□□□□ -1.05
SNF6YHL025W Q0255P03881 472 aa8.51□□□□□ -1.05
SNF6YHL025W GSP1P32835 219 aaKnown RBP8.51□□□□□ -1.05
SNF6YHL025W GSP2P32836 220 aaKnown RBP8.51□□□□□ -1.05
SNF6YHL025W YKR032WP36127 104 aa8.51□□□□□ -1.05
SNF6YHL025W YFR035CP43608 114 aa8.51□□□□□ -1.05
SNF6YHL025W RPL16BP26785 198 aaKnown RBP8.5□□□□□ -1.05
SNF6YHL025W DUO1P53168 247 aaKnown RBP8.5□□□□□ -1.05
SNF6YHL025W VPS71Q03433 280 aa8.5□□□□□ -1.05
SNF6YHL025W YIL134C-AQ45U18 67 aa8.5□□□□□ -1.05
SNF6YHL025W CYC7P00045 113 aa8.49□□□□□ -1.05
SNF6YHL025W MRPL11P36521 249 aaPredicted RBP8.49□□□□□ -1.05
SNF6YHL025W YER134CP40081 178 aa8.49□□□□□ -1.05
SNF6YHL025W TVP18Q04767 167 aa8.49□□□□□ -1.05
SNF6YHL025W ERG27Q12452 347 aaKnown RBP8.49□□□□□ -1.05
SNF6YHL025W YPR053CQ6Q5F3 151 aa8.49□□□□□ -1.05
SNF6YHL025W PET8P38921 284 aa8.48□□□□□ -1.05
SNF6YHL025W YNL200CP40165 246 aaKnown RBP8.48□□□□□ -1.05
SNF6YHL025W YCH1P42937 148 aa8.48□□□□□ -1.05
SNF6YHL025W LSM8P47093 109 aaKnown RBP8.48□□□□□ -1.05
SNF6YHL025W AIM34Q03673 198 aa8.48□□□□□ -1.05
SNF6YHL025W VHS2P40463 436 aa8.47□□□□□ -1.05
SNF6YHL025W COX12Q01519 83 aa8.47□□□□□ -1.05
SNF6YHL025W RPL42AP0CX27 106 aaKnown RBP8.46□□□□□ -1.06
SNF6YHL025W RPL42BP0CX28 106 aaKnown RBP8.46□□□□□ -1.06
SNF6YHL025W MLF3P32047 452 aa8.46□□□□□ -1.06
SNF6YHL025W KTI12P34253 313 aaKnown RBP8.46□□□□□ -1.06
SNF6YHL025W CDC40P40968 455 aaPredicted RBP8.46□□□□□ -1.06
SNF6YHL025W CGR1P53188 120 aa8.46□□□□□ -1.06
SNF6YHL025W MSC3Q05812 728 aa8.46□□□□□ -1.06
SNF6YHL025W YLR281CQ05863 155 aa8.46□□□□□ -1.06
SNF6YHL025W RRT13P40042 185 aa8.45□□□□□ -1.06
SNF6YHL025W MGR2Q02889 113 aa8.45□□□□□ -1.06
SNF6YHL025W PAU16P35994 123 aa8.44□□□□□ -1.06
SNF6YHL025W YIL014C-AQ02598 104 aa8.44□□□□□ -1.06
SNF6YHL025W HTL1Q9URQ5 78 aa8.44□□□□□ -1.06
SNF6YHL025W SAL1D6W196 494 aa8.43□□□□□ -1.06
SNF6YHL025W PFY1P07274 126 aa8.43□□□□□ -1.06
SNF6YHL025W YER076CP40049 302 aa8.43□□□□□ -1.06
SNF6YHL025W YJL028WP47062 111 aa8.43□□□□□ -1.06
SNF6YHL025W CNL1Q06333 122 aa8.42□□□□□ -1.06
SNF6YHL025W YLR042CQ07990 161 aa8.42□□□□□ -1.06
SNF6YHL025W YLR122CQ12312 125 aa8.42□□□□□ -1.06
SNF6YHL025W YPR014CQ6B0W2 109 aa8.42□□□□□ -1.06
SNF6YHL025W ATP23P53722 227 aa8.41□□□□□ -1.06
SNF6YHL025W YCR075W-AQ3E830 75 aa8.41□□□□□ -1.06
SNF6YHL025W YBR126W-AQ8TGU7 68 aa8.41□□□□□ -1.06
SNF6YHL025W YCR023CP25351 611 aa8.4□□□□□ -1.06
SNF6YHL025W ERV14P53173 138 aa8.4□□□□□ -1.06
SNF6YHL025W FCF1Q05498 189 aaPredicted RBP8.4□□□□□ -1.06
SNF6YHL025W YPS5P53057 165 aa8.39□□□□□ -1.07
SNF6YHL025W POP3P53833 195 aaPredicted RBP8.39□□□□□ -1.07
SNF6YHL025W DPP1Q05521 289 aa8.39□□□□□ -1.07
SNF6YHL025W AQY1P0CD91 305 aa8.38□□□□□ -1.07
SNF6YHL025W TOS6P48560 102 aa8.38□□□□□ -1.07
SNF6YHL025W YDR042CQ03205 200 aa8.38□□□□□ -1.07
SNF6YHL025W YKR070WP36151 352 aaKnown RBP8.37□□□□□ -1.07
SNF6YHL025W DCV1P43595 202 aa8.37□□□□□ -1.07
SNF6YHL025W GLO1P50107 326 aa8.37□□□□□ -1.07
SNF6YHL025W FUN14P18411 198 aa8.36□□□□□ -1.07
SNF6YHL025W PRE1P22141 198 aaKnown RBP8.36□□□□□ -1.07
SNF6YHL025W PCL2P25693 308 aa8.36□□□□□ -1.07
SNF6YHL025W NRG2P38082 220 aa8.36□□□□□ -1.07
SNF6YHL025W VAM10Q08474 114 aa8.36□□□□□ -1.07
SNF6YHL025W TPT1Q12272 230 aaKnown RBP8.36□□□□□ -1.07
SNF6YHL025W RPL27BP0C2H7 136 aaKnown RBP8.35□□□□□ -1.07
SNF6YHL025W YCR001WP25347 104 aa8.35□□□□□ -1.07
SNF6YHL025W YNL217WP40152 326 aa8.35□□□□□ -1.07
SNF6YHL025W RPS8AP0CX39 200 aaKnown RBP8.34□□□□□ -1.07
SNF6YHL025W RPS8BP0CX40 200 aaKnown RBP8.34□□□□□ -1.07
SNF6YHL025W DGA1Q08650 418 aa8.34□□□□□ -1.07
SNF6YHL025W YLR050CQ12155 161 aaKnown RBP8.34□□□□□ -1.07
SNF6YHL025W FYV7Q12247 151 aa8.34□□□□□ -1.07
SNF6YHL025W KRE9P39005 276 aa8.33□□□□□ -1.08
SNF6YHL025W YGR240C-AQ3E786 66 aa8.33□□□□□ -1.08
SNF6YHL025W SGF11Q03067 99 aa8.32□□□□□ -1.08
SNF6YHL025W YOR008C-AQ3E7B9 74 aa8.32□□□□□ -1.08
SNF6YHL025W SCM4P32564 187 aa8.31□□□□□ -1.08
SNF6YHL025W APS1P35181 156 aa8.31□□□□□ -1.08
SNF6YHL025W FYV4P38783 130 aaPredicted RBP8.31□□□□□ -1.08
SNF6YHL025W HAC1P41546 238 aa8.31□□□□□ -1.08
SNF6YHL025W HMRA2P0CY13 119 aa8.3□□□□□ -1.08
SNF6YHL025W PMP3P87284 55 aa8.3□□□□□ -1.08
SNF6YHL025W YLR112WQ12130 139 aa8.3□□□□□ -1.08
SNF6YHL025W MRPL44P19956 98 aa8.29□□□□□ -1.08
SNF6YHL025W URM1P40554 99 aaPredicted RBP8.29□□□□□ -1.08
SNF6YHL025W RDS3Q06835 107 aaPredicted RBP8.29□□□□□ -1.08
SNF6YHL025W SEC11P15367 167 aa8.28□□□□□ -1.08
SNF6YHL025W UBC5P15732 148 aa8.28□□□□□ -1.08
SNF6YHL025W RPL16AP26784 199 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms