RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C RPL2BP0CX46 254 aaKnown RBP5.91□□□□□ -1.46
PUP3YER094C YFR035CP43608 114 aa5.91□□□□□ -1.46
PUP3YER094C YGL118CP53132 145 aa5.91□□□□□ -1.46
PUP3YER094C RPS11AP0CX47 156 aaKnown RBP5.9□□□□□ -1.46
PUP3YER094C RPS11BP0CX48 156 aaKnown RBP5.9□□□□□ -1.46
PUP3YER094C RPL16BP26785 198 aaKnown RBP5.9□□□□□ -1.46
PUP3YER094C ELF1P36053 145 aa5.9□□□□□ -1.46
PUP3YER094C MRPL11P36521 249 aaPredicted RBP5.9□□□□□ -1.46
PUP3YER094C SDH8P38345 138 aa5.9□□□□□ -1.46
PUP3YER094C YDR366CP87287 132 aa5.9□□□□□ -1.46
PUP3YER094C SEN15Q04675 128 aa5.9□□□□□ -1.46
PUP3YER094C AIR2Q12476 344 aaKnown RBP5.9□□□□□ -1.46
PUP3YER094C YBR200W-AQ3E755 54 aa5.9□□□□□ -1.46
PUP3YER094C OST3P48439 350 aa5.89□□□□□ -1.47
PUP3YER094C VPS71Q03433 280 aa5.89□□□□□ -1.47
PUP3YER094C YLR122CQ12312 125 aa5.89□□□□□ -1.47
PUP3YER094C GSP1P32835 219 aaKnown RBP5.88□□□□□ -1.47
PUP3YER094C GSP2P32836 220 aaKnown RBP5.88□□□□□ -1.47
PUP3YER094C YKR032WP36127 104 aa5.88□□□□□ -1.47
PUP3YER094C YER134CP40081 178 aa5.88□□□□□ -1.47
PUP3YER094C TVP18Q04767 167 aa5.88□□□□□ -1.47
PUP3YER094C YIL134C-AQ45U18 67 aa5.88□□□□□ -1.47
PUP3YER094C YPR053CQ6Q5F3 151 aa5.88□□□□□ -1.47
PUP3YER094C PET8P38921 284 aa5.87□□□□□ -1.47
PUP3YER094C TEM1P38987 245 aa5.87□□□□□ -1.47
PUP3YER094C BRP1P53194 125 aa5.87□□□□□ -1.47
PUP3YER094C COX12Q01519 83 aa5.87□□□□□ -1.47
PUP3YER094C AIM34Q03673 198 aa5.87□□□□□ -1.47
PUP3YER094C YLR281CQ05863 155 aa5.87□□□□□ -1.47
PUP3YER094C LSO2Q3E772 92 aaKnown RBP5.87□□□□□ -1.47
PUP3YER094C COA6Q3E846 104 aa5.87□□□□□ -1.47
PUP3YER094C MLF3P32047 452 aa5.86□□□□□ -1.47
PUP3YER094C YNL200CP40165 246 aaKnown RBP5.86□□□□□ -1.47
PUP3YER094C VHS2P40463 436 aa5.86□□□□□ -1.47
PUP3YER094C ERG27Q12452 347 aaKnown RBP5.86□□□□□ -1.47
PUP3YER094C KTI12P34253 313 aaKnown RBP5.85□□□□□ -1.47
PUP3YER094C CGR1P53188 120 aa5.85□□□□□ -1.47
PUP3YER094C YLR042CQ07990 161 aa5.85□□□□□ -1.47
PUP3YER094C YPR014CQ6B0W2 109 aa5.85□□□□□ -1.47
PUP3YER094C CYC7P00045 113 aa5.84□□□□□ -1.47
PUP3YER094C RPL42AP0CX27 106 aaKnown RBP5.84□□□□□ -1.47
PUP3YER094C RPL42BP0CX28 106 aaKnown RBP5.84□□□□□ -1.47
PUP3YER094C RRT13P40042 185 aa5.84□□□□□ -1.47
PUP3YER094C YER076CP40049 302 aa5.84□□□□□ -1.47
PUP3YER094C CDC40P40968 455 aaPredicted RBP5.84□□□□□ -1.47
PUP3YER094C YCH1P42937 148 aa5.84□□□□□ -1.47
PUP3YER094C YCR075W-AQ3E830 75 aa5.84□□□□□ -1.47
PUP3YER094C SAL1D6W196 494 aa5.83□□□□□ -1.48
PUP3YER094C ATP23P53722 227 aa5.83□□□□□ -1.48
PUP3YER094C YCR001WP25347 104 aa5.82□□□□□ -1.48
PUP3YER094C YCR023CP25351 611 aa5.82□□□□□ -1.48
PUP3YER094C LSM8P47093 109 aaKnown RBP5.82□□□□□ -1.48
PUP3YER094C YPS5P53057 165 aa5.82□□□□□ -1.48
PUP3YER094C YIL014C-AQ02598 104 aa5.82□□□□□ -1.48
PUP3YER094C YBR126W-AQ8TGU7 68 aa5.82□□□□□ -1.48
PUP3YER094C HTL1Q9URQ5 78 aa5.82□□□□□ -1.48
PUP3YER094C NRG2P38082 220 aa5.81□□□□□ -1.48
PUP3YER094C YJL028WP47062 111 aa5.81□□□□□ -1.48
PUP3YER094C MGR2Q02889 113 aa5.81□□□□□ -1.48
PUP3YER094C PFY1P07274 126 aa5.8□□□□□ -1.48
PUP3YER094C PAU16P35994 123 aa5.8□□□□□ -1.48
PUP3YER094C YNL217WP40152 326 aa5.8□□□□□ -1.48
PUP3YER094C DCV1P43595 202 aa5.8□□□□□ -1.48
PUP3YER094C ERV14P53173 138 aa5.8□□□□□ -1.48
PUP3YER094C POP3P53833 195 aaPredicted RBP5.8□□□□□ -1.48
PUP3YER094C CNL1Q06333 122 aa5.8□□□□□ -1.48
PUP3YER094C AQY1P0CD91 305 aa5.79□□□□□ -1.48
PUP3YER094C PRE1P22141 198 aaKnown RBP5.79□□□□□ -1.48
PUP3YER094C PCL2P25693 308 aa5.79□□□□□ -1.48
PUP3YER094C NUP42P49686 430 aaKnown RBP5.79□□□□□ -1.48
PUP3YER094C GLO1P50107 326 aa5.79□□□□□ -1.48
PUP3YER094C DPP1Q05521 289 aa5.79□□□□□ -1.48
PUP3YER094C DGA1Q08650 418 aa5.79□□□□□ -1.48
PUP3YER094C SGF11Q03067 99 aa5.78□□□□□ -1.48
PUP3YER094C FCF1Q05498 189 aaPredicted RBP5.78□□□□□ -1.48
PUP3YER094C FUN14P18411 198 aa5.77□□□□□ -1.49
PUP3YER094C YKR070WP36151 352 aaKnown RBP5.77□□□□□ -1.49
PUP3YER094C FYV4P38783 130 aaPredicted RBP5.77□□□□□ -1.49
PUP3YER094C KRE9P39005 276 aa5.77□□□□□ -1.49
PUP3YER094C TOS6P48560 102 aa5.77□□□□□ -1.49
PUP3YER094C VAM10Q08474 114 aa5.77□□□□□ -1.49
PUP3YER094C TPT1Q12272 230 aaKnown RBP5.77□□□□□ -1.49
PUP3YER094C HMRA2P0CY13 119 aa5.76□□□□□ -1.49
PUP3YER094C YPT53P36019 220 aa5.76□□□□□ -1.49
PUP3YER094C YRA2P36036 203 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
PUP3YER094C PMP3P87284 55 aa5.76□□□□□ -1.49
PUP3YER094C YDR042CQ03205 200 aa5.76□□□□□ -1.49
PUP3YER094C RDS3Q06835 107 aaPredicted RBP5.76□□□□□ -1.49
PUP3YER094C RPL27BP0C2H7 136 aaKnown RBP5.75□□□□□ -1.49
PUP3YER094C APS1P35181 156 aa5.75□□□□□ -1.49
PUP3YER094C YGR240C-AQ3E786 66 aa5.75□□□□□ -1.49
PUP3YER094C YOR008C-AQ3E7B9 74 aa5.75□□□□□ -1.49
PUP3YER094C AUA1P32450 94 aa5.74□□□□□ -1.49
PUP3YER094C YBR209WP38311 105 aa5.74□□□□□ -1.49
PUP3YER094C URM1P40554 99 aaPredicted RBP5.74□□□□□ -1.49
PUP3YER094C PKR1Q03880 122 aaKnown RBP5.74□□□□□ -1.49
PUP3YER094C YLR050CQ12155 161 aaKnown RBP5.74□□□□□ -1.49
PUP3YER094C SCS22Q6Q595 175 aa5.74□□□□□ -1.49
PUP3YER094C RPL16AP26784 199 aaKnown RBP5.73□□□□□ -1.49
PUP3YER094C YIL059CP40520 121 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms