RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	RPS11A	P0CX47	156 aa	Known RBP	1.01	□□□□□ -2.25
DOT6	YER088C	RPS11B	P0CX48	156 aa	Known RBP	1.01	□□□□□ -2.25
DOT6	YER088C	ANB1	P19211	157 aa		1.01	□□□□□ -2.25
DOT6	YER088C	ATP15	P21306	62 aa		1.01	□□□□□ -2.25
DOT6	YER088C	IDP1	P21954	428 aa	Known RBP	1.01	□□□□□ -2.25
DOT6	YER088C	UBC8	P28263	218 aa		1.01	□□□□□ -2.25
DOT6	YER088C	PAN3	P36102	679 aa	Predicted RBP	1.01	□□□□□ -2.25
DOT6	YER088C	YPT31	P38555	223 aa	Known RBP	1.01	□□□□□ -2.25
DOT6	YER088C	SER2	P42941	309 aa		1.01	□□□□□ -2.25
DOT6	YER088C	GPI14	P47088	403 aa	Known RBP	1.01	□□□□□ -2.25
DOT6	YER088C	YJR111C	P47148	283 aa	Known RBP	1.01	□□□□□ -2.25
DOT6	YER088C	BUD25	P85052	153 aa		1.01	□□□□□ -2.25
DOT6	YER088C	TMA20	P89886	181 aa	Predicted RBP	1.01	□□□□□ -2.25
DOT6	YER088C	SPC24	Q04477	213 aa		1.01	□□□□□ -2.25
DOT6	YER088C	NMA1	Q06178	401 aa	Known RBP	1.01	□□□□□ -2.25
DOT6	YER088C	ODC2	Q99297	307 aa		1.01	□□□□□ -2.25
DOT6	YER088C	RPS28B	P0C0X0	67 aa	Known RBP	1.01	□□□□□ -2.25
DOT6	YER088C	RPL2A	P0CX45	254 aa	Known RBP	1.01	□□□□□ -2.25
DOT6	YER088C	RPL2B	P0CX46	254 aa	Known RBP	1.01	□□□□□ -2.25
DOT6	YER088C	YBL010C	P32788	280 aa		1.01	□□□□□ -2.25
DOT6	YER088C	RRT1	P38192	103 aa		1.01	□□□□□ -2.25
DOT6	YER088C	DSE2	P38844	325 aa		1.01	□□□□□ -2.25
DOT6	YER088C	YEA4	P40004	342 aa		1.01	□□□□□ -2.25
DOT6	YER088C	YJR015W	P47090	510 aa		1.01	□□□□□ -2.25
DOT6	YER088C	ORM1	P53224	222 aa		1.01	□□□□□ -2.25
DOT6	YER088C	YMR252C	Q04814	134 aa		1.01	□□□□□ -2.25
DOT6	YER088C	YOL014W	Q08110	124 aa		1.01	□□□□□ -2.25
DOT6	YER088C	YGL258W-A	Q3E740	77 aa		1.01	□□□□□ -2.25
DOT6	YER088C	RPS28A	Q3E7X9	67 aa	Predicted RBP	1.01	□□□□□ -2.25
DOT6	YER088C	YML100W-A	Q8TGT0	57 aa		1.01	□□□□□ -2.25
DOT6	YER088C	FPR2	P32472	135 aa		1	□□□□□ -2.25
DOT6	YER088C	DER1	P38307	211 aa		1	□□□□□ -2.25
DOT6	YER088C	SVP26	P38869	228 aa		1	□□□□□ -2.25
DOT6	YER088C	GPI2	P46961	280 aa		1	□□□□□ -2.25
DOT6	YER088C	SPC1	P46965	94 aa		1	□□□□□ -2.25
DOT6	YER088C	DOC1	P53068	250 aa		1	□□□□□ -2.25
DOT6	YER088C	YMR295C	Q03559	197 aa		1	□□□□□ -2.25
DOT6	YER088C	YLR412C-A	Q3E742	68 aa		1	□□□□□ -2.25
DOT6	YER088C	YCR075W-A	Q3E830	75 aa		1	□□□□□ -2.25
DOT6	YER088C	YAR023C	D6VPM8	179 aa		0.99	□□□□□ -2.25
DOT6	YER088C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.99	□□□□□ -2.25	not detected
DOT6	YER088C	VTC1	P40046	129 aa	RIP-Chip data	0.99	□□□□□ -2.25	not detected
DOT6	YER088C	YNL217W	P40152	326 aa		0.99	□□□□□ -2.25
DOT6	YER088C	FSF1	Q12029	327 aa	Known RBP	0.99	□□□□□ -2.25
DOT6	YER088C	RDI1	Q12434	202 aa		0.99	□□□□□ -2.25
DOT6	YER088C	PET20	Q99373	253 aa		0.99	□□□□□ -2.25
DOT6	YER088C	POR1	P04840	283 aa	Known RBP	0.99	□□□□□ -2.25
DOT6	YER088C	SEN2	P16658	377 aa		0.99	□□□□□ -2.25
DOT6	YER088C	SPO13	P23624	291 aa		0.99	□□□□□ -2.25
DOT6	YER088C	YCR001W	P25347	104 aa		0.99	□□□□□ -2.25
DOT6	YER088C	YBL071C	P38185	102 aa		0.99	□□□□□ -2.25
DOT6	YER088C	TRS20	P38334	175 aa		0.99	□□□□□ -2.25
DOT6	YER088C	GRX5	Q02784	150 aa		0.99	□□□□□ -2.25
DOT6	YER088C	EST3	Q03096	181 aa		0.99	□□□□□ -2.25
DOT6	YER088C	YGR240C-A	Q3E786	66 aa		0.99	□□□□□ -2.25
DOT6	YER088C	YOR011W-A	Q3E807	68 aa		0.99	□□□□□ -2.25
DOT6	YER088C	HUG1	Q6Q5K6	68 aa		0.99	□□□□□ -2.25
DOT6	YER088C	PBI2	P0CT04	75 aa	Known RBP	0.98	□□□□□ -2.25
DOT6	YER088C	YBR209W	P38311	105 aa		0.98	□□□□□ -2.25
DOT6	YER088C	YFL019C	P43576	117 aa		0.98	□□□□□ -2.25
DOT6	YER088C	YAE1	P47118	141 aa	Predicted RBP	0.98	□□□□□ -2.25
DOT6	YER088C	THI74	Q04083	370 aa		0.98	□□□□□ -2.25
DOT6	YER088C	YLR042C	Q07990	161 aa		0.98	□□□□□ -2.25
DOT6	YER088C	CCW12	Q12127	133 aa		0.98	□□□□□ -2.25
DOT6	YER088C	YLR099W-A	Q3E798	87 aa		0.98	□□□□□ -2.25
DOT6	YER088C	YLL066W-B	Q8TGJ7	56 aa		0.98	□□□□□ -2.25
DOT6	YER088C	YHR213W	P0CI67	198 aa		0.98	□□□□□ -2.25
DOT6	YER088C	FZF1	P32805	299 aa		0.98	□□□□□ -2.25
DOT6	YER088C	CSH1	P38287	376 aa		0.98	□□□□□ -2.25
DOT6	YER088C	YBR219C	P38317	127 aa		0.98	□□□□□ -2.25
DOT6	YER088C	NSA2	P40078	261 aa	Known RBP	0.98	□□□□□ -2.25
DOT6	YER088C	PAM16	P42949	149 aa		0.98	□□□□□ -2.25
DOT6	YER088C	YGR017W	P53210	297 aa		0.98	□□□□□ -2.25
DOT6	YER088C	YNR077C	P53758	84 aa		0.98	□□□□□ -2.25
DOT6	YER088C	CUE4	Q04201	117 aa	Predicted RBP	0.98	□□□□□ -2.25
DOT6	YER088C	SDH7	Q04401	133 aa		0.98	□□□□□ -2.25
DOT6	YER088C	SHH3	Q04487	196 aa		0.98	□□□□□ -2.25
DOT6	YER088C	COA4	Q05809	96 aa		0.98	□□□□□ -2.25
DOT6	YER088C	YLR236C	A0A023PZG4	107 aa		0.97	□□□□□ -2.25
DOT6	YER088C	RTC6	O14464	93 aa		0.97	□□□□□ -2.25
DOT6	YER088C	SNU13	P39990	126 aa	Known RBP	0.97	□□□□□ -2.25
DOT6	YER088C	IMP2	P46972	177 aa		0.97	□□□□□ -2.25
DOT6	YER088C	LSM1	P47017	172 aa	Known RBP	0.97	□□□□□ -2.25
DOT6	YER088C	SBH1	P52870	82 aa		0.97	□□□□□ -2.25
DOT6	YER088C	VPS28	Q02767	242 aa		0.97	□□□□□ -2.25
DOT6	YER088C	YLR162W	Q06235	118 aa		0.97	□□□□□ -2.25
DOT6	YER088C	NAT3	Q06504	195 aa		0.97	□□□□□ -2.25
DOT6	YER088C	YDR034C-A	P0C289	58 aa		0.96	□□□□□ -2.26
DOT6	YER088C	SPC25	P40014	221 aa		0.96	□□□□□ -2.26
DOT6	YER088C	TOM7	P53507	60 aa		0.96	□□□□□ -2.26
DOT6	YER088C	UBC7	Q02159	165 aa		0.96	□□□□□ -2.26
DOT6	YER088C	LCL1	Q02786	101 aa		0.96	□□□□□ -2.26
DOT6	YER088C	YMR253C	Q04835	414 aa		0.96	□□□□□ -2.26
DOT6	YER088C	FRQ1	Q06389	190 aa		0.96	□□□□□ -2.26
DOT6	YER088C	SYM1	Q06563	197 aa		0.96	□□□□□ -2.26
DOT6	YER088C	SCP1	Q08873	200 aa		0.96	□□□□□ -2.26
DOT6	YER088C	MED11	Q99278	115 aa		0.96	□□□□□ -2.26
DOT6	YER088C	RAD6	P06104	172 aa		0.96	□□□□□ -2.26
DOT6	YER088C	TIR1	P10863	254 aa		0.96	□□□□□ -2.26
DOT6	YER088C	YGL010W	P25338	174 aa		0.96	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms