RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C YIL014C-AQ02598 104 aa-0.35□□□□□ -2.46
SNU56YDR240C YLR285C-AQ3E771 56 aa-0.35□□□□□ -2.46
SNU56YDR240C POL2P21951 2222 aaKnown RBP-0.35□□□□□ -2.47
SNU56YDR240C YLR255CO13574 117 aa-0.35□□□□□ -2.47
SNU56YDR240C ADK1P07170 222 aaKnown RBP-0.35□□□□□ -2.47
SNU56YDR240C RPC19P28000 142 aaKnown RBP-0.35□□□□□ -2.47
SNU56YDR240C PHS1P40857 217 aa-0.35□□□□□ -2.47
SNU56YDR240C YGR039WP53225 103 aa-0.35□□□□□ -2.47
SNU56YDR240C ELC1Q03071 99 aa-0.35□□□□□ -2.47
SNU56YDR240C TVP18Q04767 167 aa-0.35□□□□□ -2.47
SNU56YDR240C SMD2Q06217 110 aaKnown RBP-0.35□□□□□ -2.47
SNU56YDR240C TRM732Q03496 1420 aa-0.36□□□□□ -2.47
SNU56YDR240C YJL197C-AP0C5P0 93 aa-0.36□□□□□ -2.47
SNU56YDR240C CYB5P40312 120 aa-0.36□□□□□ -2.47
SNU56YDR240C CCW14O13547 238 aa-0.37□□□□□ -2.47
SNU56YDR240C GCV3P39726 170 aaPredicted RBP-0.37□□□□□ -2.47
SNU56YDR240C RBL2P48606 106 aaKnown RBP-0.37□□□□□ -2.47
SNU56YDR240C MPC1P53157 130 aaKnown RBP-0.37□□□□□ -2.47
SNU56YDR240C ERV14P53173 138 aa-0.37□□□□□ -2.47
SNU56YDR240C RUB1Q03919 77 aa-0.37□□□□□ -2.47
SNU56YDR240C SEC59P20048 519 aa-0.38□□□□□ -2.47
SNU56YDR240C YOR376W-AQ3E805 51 aa-0.38□□□□□ -2.47
SNU56YDR240C URB1P34241 1764 aaKnown RBP-0.38□□□□□ -2.47
SNU56YDR240C ECM5Q03214 1411 aa-0.39□□□□□ -2.47
SNU56YDR240C YPK9Q12697 1472 aa-0.39□□□□□ -2.47
SNU56YDR240C YKL044WP36092 106 aa-0.39□□□□□ -2.47
SNU56YDR240C COX23P38824 151 aa-0.39□□□□□ -2.47
SNU56YDR240C PAU12P53343 120 aa-0.39□□□□□ -2.47
SNU56YDR240C GPI19Q04082 140 aa-0.39□□□□□ -2.47
SNU56YDR240C HYM1P32464 399 aa-0.4□□□□□ -2.47
SNU56YDR240C GAT4P40569 121 aa-0.4□□□□□ -2.47
SNU56YDR240C YNL277W-AQ3E7Z0 62 aa-0.4□□□□□ -2.47
SNU56YDR240C TY4B-HP0C2J7 1802 aa-0.4□□□□□ -2.47
SNU56YDR240C SGF11Q03067 99 aa-0.41□□□□□ -2.47
SNU56YDR240C YHR130CP38834 111 aa-0.41□□□□□ -2.48
SNU56YDR240C SFT1P43682 97 aa-0.41□□□□□ -2.48
SNU56YDR240C TLG1Q03322 224 aa-0.41□□□□□ -2.48
SNU56YDR240C SLO1Q3E784 85 aa-0.41□□□□□ -2.48
SNU56YDR240C DNA2P38859 1522 aa-0.42□□□□□ -2.48
SNU56YDR240C HMRA2P0CY13 119 aa-0.42□□□□□ -2.48
SNU56YDR240C SHU1P38751 150 aa-0.42□□□□□ -2.48
SNU56YDR240C SNF11P38956 169 aa-0.42□□□□□ -2.48
SNU56YDR240C YIR020CP40575 100 aa-0.42□□□□□ -2.48
SNU56YDR240C CNL1Q06333 122 aa-0.42□□□□□ -2.48
SNU56YDR240C PCC1Q3E833 88 aa-0.42□□□□□ -2.48
SNU56YDR240C OST5Q92316 86 aa-0.42□□□□□ -2.48
SNU56YDR240C PAU24P38155 120 aa-0.43□□□□□ -2.48
SNU56YDR240C YIL086CP40503 102 aa-0.43□□□□□ -2.48
SNU56YDR240C YGR042WP53227 271 aa-0.43□□□□□ -2.48
SNU56YDR240C RPO41P13433 1351 aaKnown RBP-0.43□□□□□ -2.48
SNU56YDR240C SEC7P11075 2009 aaKnown RBP-0.44□□□□□ -2.48
SNU56YDR240C ACP1P32463 125 aa-0.44□□□□□ -2.48
SNU56YDR240C PAU2P32612 120 aa-0.44□□□□□ -2.48
SNU56YDR240C RPS20P38701 121 aaKnown RBP-0.44□□□□□ -2.48
SNU56YDR240C PAM16P42949 149 aa-0.44□□□□□ -2.48
SNU56YDR240C YRF1-6P53819 1859 aa-0.44□□□□□ -2.48
SNU56YDR240C CSN9Q03981 162 aa-0.44□□□□□ -2.48
SNU56YDR240C YPL261CQ08976 102 aa-0.44□□□□□ -2.48
SNU56YDR240C YOR097CQ12274 175 aaPredicted RBP-0.44□□□□□ -2.48
SNU56YDR240C YLR363W-AQ3E747 85 aa-0.44□□□□□ -2.48
SNU56YDR240C Q0144Q9ZZW2 109 aa-0.44□□□□□ -2.48
SNU56YDR240C TOP2P06786 1428 aaKnown RBP-0.45□□□□□ -2.48
SNU56YDR240C CYC2P38909 366 aa-0.45□□□□□ -2.48
SNU56YDR240C GIM4P40005 111 aaKnown RBP-0.45□□□□□ -2.48
SNU56YDR240C RPL22BP56628 122 aaKnown RBP-0.45□□□□□ -2.48
SNU56YDR240C RPS11AP0CX47 156 aaKnown RBP-0.46□□□□□ -2.48
SNU56YDR240C RPS11BP0CX48 156 aaKnown RBP-0.46□□□□□ -2.48
SNU56YDR240C YBR016WP38216 128 aa-0.46□□□□□ -2.48
SNU56YDR240C TIM8P57744 87 aa-0.46□□□□□ -2.48
SNU56YDR240C YDR210WQ03482 75 aa-0.46□□□□□ -2.48
SNU56YDR240C RAD50P12753 1312 aa-0.47□□□□□ -2.48
SNU56YDR240C MPC2P38857 129 aa-0.47□□□□□ -2.48
SNU56YDR240C YER187WP40102 141 aa-0.47□□□□□ -2.48
SNU56YDR240C SNN1P48232 102 aa-0.47□□□□□ -2.48
SNU56YDR240C SAE3P89114 91 aa-0.47□□□□□ -2.48
SNU56YDR240C YDR278CQ05612 105 aa-0.47□□□□□ -2.48
SNU56YDR240C FRQ1Q06389 190 aa-0.47□□□□□ -2.48
SNU56YDR240C YCL048W-AQ2V2Q2 79 aa-0.47□□□□□ -2.48
SNU56YDR240C RSF2P46974 1380 aa-0.47□□□□□ -2.49
SNU56YDR240C YFR009W-AP0C5M9 85 aa-0.48□□□□□ -2.49
SNU56YDR240C YNL198CP40166 100 aa-0.48□□□□□ -2.49
SNU56YDR240C POP7P38291 140 aa-0.48□□□□□ -2.49
SNU56YDR240C TDA2P40045 126 aa-0.48□□□□□ -2.49
SNU56YDR240C IMP2P46972 177 aa-0.48□□□□□ -2.49
SNU56YDR240C SPC24Q04477 213 aa-0.48□□□□□ -2.49
SNU56YDR240C LSM6Q06406 86 aaKnown RBP-0.48□□□□□ -2.49
SNU56YDR240C COX19Q3E731 98 aa-0.48□□□□□ -2.49
SNU56YDR240C RIM15P43565 1770 aa-0.48□□□□□ -2.49
SNU56YDR240C PAU19P0CE85 124 aa-0.49□□□□□ -2.49
SNU56YDR240C PAU3P25610 124 aa-0.49□□□□□ -2.49
SNU56YDR240C YLR361C-AQ3E795 98 aa-0.49□□□□□ -2.49
SNU56YDR240C RPC10P40422 70 aa-0.5□□□□□ -2.49
SNU56YDR240C YGR164WP53291 111 aa-0.5□□□□□ -2.49
SNU56YDR240C YOL118CQ08259 102 aa-0.5□□□□□ -2.49
SNU56YDR240C DAD1Q12248 94 aa-0.5□□□□□ -2.49
SNU56YDR240C YCR101CP25607 182 aa-0.51□□□□□ -2.49
SNU56YDR240C YPL038W-AQ3E7B4 63 aa-0.52□□□□□ -2.49
SNU56YDR240C MYO2P19524 1574 aaKnown RBP-0.52□□□□□ -2.49
SNU56YDR240C CAT8P39113 1433 aa-0.53□□□□□ -2.49
SNU56YDR240C YCR099CP25657 155 aa-0.53□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms