RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W EMC5P40540 141 aa4.34□□□□□ -1.71
VMS1YDR049W PBA1Q05778 276 aa4.34□□□□□ -1.71
VMS1YDR049W YOS1Q3E834 85 aa4.34□□□□□ -1.71
VMS1YDR049W LSM2P38203 95 aaKnown RBP4.33□□□□□ -1.72
VMS1YDR049W RRT13P40042 185 aa4.33□□□□□ -1.72
VMS1YDR049W ATP19P81451 68 aa4.33□□□□□ -1.72
VMS1YDR049W DAN1P47178 298 aa4.32□□□□□ -1.72
VMS1YDR049W MZM1Q03429 123 aaPredicted RBP4.32□□□□□ -1.72
VMS1YDR049W SWD3P38123 315 aa4.32□□□□□ -1.72
VMS1YDR049W YGR026WP53217 278 aa4.32□□□□□ -1.72
VMS1YDR049W REE1P40893 198 aa4.31□□□□□ -1.72
VMS1YDR049W YHR213W-AQ8TGT4 77 aa4.31□□□□□ -1.72
VMS1YDR049W ATG40Q99325 256 aa4.31□□□□□ -1.72
VMS1YDR049W COX4P04037 155 aa4.3□□□□□ -1.72
VMS1YDR049W INO4P13902 151 aa4.3□□□□□ -1.72
VMS1YDR049W QCR10P37299 77 aa4.3□□□□□ -1.72
VMS1YDR049W YHP1Q04116 353 aa4.3□□□□□ -1.72
VMS1YDR049W CYB5P40312 120 aa4.3□□□□□ -1.72
VMS1YDR049W RPL22BP56628 122 aaKnown RBP4.3□□□□□ -1.72
VMS1YDR049W UPS3Q04006 179 aa4.3□□□□□ -1.72
VMS1YDR049W GPI19Q04082 140 aa4.3□□□□□ -1.72
VMS1YDR049W YHR032W-AP0C5N6 59 aa4.29□□□□□ -1.72
VMS1YDR049W FZF1P32805 299 aa4.29□□□□□ -1.72
VMS1YDR049W YBR013CP38215 129 aa4.29□□□□□ -1.72
VMS1YDR049W SOM1Q05676 74 aa4.29□□□□□ -1.72
VMS1YDR049W FLO11P08640 1367 aa4.29□□□□□ -1.72
VMS1YDR049W SMD3P43321 101 aaKnown RBP4.28□□□□□ -1.72
VMS1YDR049W CWP2P43497 92 aa4.28□□□□□ -1.72
VMS1YDR049W ELP6Q04868 273 aa4.28□□□□□ -1.72
VMS1YDR049W FYV5P25585 152 aa4.28□□□□□ -1.72
VMS1YDR049W YEL045CP32616 141 aa4.28□□□□□ -1.72
VMS1YDR049W YBR032WP38223 100 aa4.28□□□□□ -1.72
VMS1YDR049W GRX5Q02784 150 aa4.28□□□□□ -1.72
VMS1YDR049W MIX14Q04341 121 aa4.28□□□□□ -1.72
VMS1YDR049W YOL085CQ99345 113 aa4.28□□□□□ -1.72
VMS1YDR049W YBL059WP34224 193 aa4.27□□□□□ -1.73
VMS1YDR049W YFL065CP43539 102 aa4.27□□□□□ -1.73
VMS1YDR049W YPR203WQ08994 102 aa4.27□□□□□ -1.73
VMS1YDR049W YFR010W-AP0C5N0 62 aa4.26□□□□□ -1.73
VMS1YDR049W PEP8P40335 379 aa4.26□□□□□ -1.73
VMS1YDR049W HUR1P45820 110 aa4.26□□□□□ -1.73
VMS1YDR049W YLR296WQ05898 108 aa4.26□□□□□ -1.73
VMS1YDR049W YDL241WQ07738 123 aa4.26□□□□□ -1.73
VMS1YDR049W IRC23Q08416 157 aa4.26□□□□□ -1.73
VMS1YDR049W RIM15P43565 1770 aa4.26□□□□□ -1.73
VMS1YDR049W STF2P16965 84 aa4.26□□□□□ -1.73
VMS1YDR049W MIG1P27705 504 aa4.26□□□□□ -1.73
VMS1YDR049W YHL018WP38744 120 aaPredicted RBP4.26□□□□□ -1.73
VMS1YDR049W IRC19Q07843 230 aa4.26□□□□□ -1.73
VMS1YDR049W YOR015WQ12169 119 aa4.26□□□□□ -1.73
VMS1YDR049W UBR1P19812 1950 aa4.25□□□□□ -1.73
VMS1YDR049W YCR043CP25361 127 aa4.25□□□□□ -1.73
VMS1YDR049W ASK1P35734 292 aa4.24□□□□□ -1.73
VMS1YDR049W MID2P36027 376 aa4.24□□□□□ -1.73
VMS1YDR049W ECM34P38728 170 aa4.24□□□□□ -1.73
VMS1YDR049W FUN14P18411 198 aa4.24□□□□□ -1.73
VMS1YDR049W NRG2P38082 220 aa4.24□□□□□ -1.73
VMS1YDR049W RSM19P53733 91 aaPredicted RBP4.24□□□□□ -1.73
VMS1YDR049W RRT15Q3E811 62 aa4.24□□□□□ -1.73
VMS1YDR049W VMA21P41806 77 aa4.23□□□□□ -1.73
VMS1YDR049W PAI3P01094 68 aa4.22□□□□□ -1.73
VMS1YDR049W YCR085WP25650 117 aa4.22□□□□□ -1.73
VMS1YDR049W MRPL27P36526 146 aaPredicted RBP4.22□□□□□ -1.73
VMS1YDR049W YER187WP40102 141 aa4.22□□□□□ -1.73
VMS1YDR049W IGO1P53897 168 aa4.22□□□□□ -1.73
VMS1YDR049W PIR1Q03178 341 aa4.22□□□□□ -1.73
VMS1YDR049W MDM35O60200 86 aa4.22□□□□□ -1.73
VMS1YDR049W YML079WQ03629 201 aa4.22□□□□□ -1.73
VMS1YDR049W SUS1Q6WNK7 96 aa4.22□□□□□ -1.73
VMS1YDR049W YKR045CP36138 183 aa4.21□□□□□ -1.74
VMS1YDR049W YDR042CQ03205 200 aa4.21□□□□□ -1.74
VMS1YDR049W YOR268CQ08734 132 aa4.21□□□□□ -1.74
VMS1YDR049W ATG41Q12048 136 aa4.21□□□□□ -1.74
VMS1YDR049W DAD1Q12248 94 aa4.21□□□□□ -1.74
VMS1YDR049W MYO1P08964 1928 aa4.21□□□□□ -1.74
VMS1YDR049W PAU21P0CE86 164 aa4.2□□□□□ -1.74
VMS1YDR049W PAU22P0CE87 164 aa4.2□□□□□ -1.74
VMS1YDR049W YHR138CP38841 114 aaPredicted RBP4.2□□□□□ -1.74
VMS1YDR049W SVP26P38869 228 aa4.2□□□□□ -1.74
VMS1YDR049W YPL261CQ08976 102 aa4.2□□□□□ -1.74
VMS1YDR049W RPS25BP0C0T4 108 aaKnown RBP4.2□□□□□ -1.74
VMS1YDR049W YHR180WP38868 163 aa4.2□□□□□ -1.74
VMS1YDR049W HSP10P38910 106 aa4.2□□□□□ -1.74
VMS1YDR049W YEL067CP39978 195 aa4.2□□□□□ -1.74
VMS1YDR049W YNR077CP53758 84 aa4.2□□□□□ -1.74
VMS1YDR049W NMA1Q06178 401 aaKnown RBP4.2□□□□□ -1.74
VMS1YDR049W YLR363W-AQ3E747 85 aa4.2□□□□□ -1.74
VMS1YDR049W EMC6Q12431 108 aa4.19□□□□□ -1.74
VMS1YDR049W SSS1P35179 80 aa4.18□□□□□ -1.74
VMS1YDR049W YKR032WP36127 104 aa4.18□□□□□ -1.74
VMS1YDR049W PRM3Q08931 133 aa4.18□□□□□ -1.74
VMS1YDR049W PPT2Q12036 173 aa4.18□□□□□ -1.74
VMS1YDR049W POC4Q12245 148 aaPredicted RBP4.18□□□□□ -1.74
VMS1YDR049W MHF1Q3E835 90 aa4.18□□□□□ -1.74
VMS1YDR049W PDX3P38075 228 aaKnown RBP4.18□□□□□ -1.74
VMS1YDR049W PAU12P53343 120 aa4.18□□□□□ -1.74
VMS1YDR049W RPA12P32529 125 aaKnown RBP4.17□□□□□ -1.74
VMS1YDR049W YGR269WP40326 108 aa4.17□□□□□ -1.74
VMS1YDR049W YPR013CQ12145 317 aa4.17□□□□□ -1.74
VMS1YDR049W YBR298C-AQ8TGK4 73 aa4.17□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms