RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC7	YDL017W	MOT3	P54785	490 aa	Known RBP	5.49	□□□□□ -1.53
CDC7	YDL017W	IZH3	Q07959	543 aa		5.49	□□□□□ -1.53
CDC7	YDL017W	YPR014C	Q6B0W2	109 aa		5.49	□□□□□ -1.53
CDC7	YDL017W	MRPL49	P40858	161 aa	Predicted RBP	5.48	□□□□□ -1.53
CDC7	YDL017W	GLC8	P41818	229 aa		5.48	□□□□□ -1.53
CDC7	YDL017W	PAU23	Q07987	124 aa		5.48	□□□□□ -1.53
CDC7	YDL017W	CCW12	Q12127	133 aa		5.48	□□□□□ -1.53
CDC7	YDL017W	YLR050C	Q12155	161 aa	Known RBP	5.48	□□□□□ -1.53
CDC7	YDL017W	PAU17	Q12370	124 aa		5.48	□□□□□ -1.53
CDC7	YDL017W	SCS22	Q6Q595	175 aa		5.48	□□□□□ -1.53
CDC7	YDL017W	HTL1	Q9URQ5	78 aa		5.48	□□□□□ -1.53
CDC7	YDL017W	YHR022C	P38763	256 aa		5.48	□□□□□ -1.53
CDC7	YDL017W	FYV4	P38783	130 aa	Predicted RBP	5.48	□□□□□ -1.53
CDC7	YDL017W	MST28	P39552	234 aa		5.48	□□□□□ -1.53
CDC7	YDL017W	MSL1	P40567	111 aa	Predicted RBP	5.48	□□□□□ -1.53
CDC7	YDL017W	YIP3	P53633	176 aa		5.48	□□□□□ -1.53
CDC7	YDL017W	DIA1	P54005	336 aa		5.48	□□□□□ -1.53
CDC7	YDL017W	MGR2	Q02889	113 aa		5.48	□□□□□ -1.53
CDC7	YDL017W	GRH1	Q04410	372 aa	Known RBP	5.48	□□□□□ -1.53
CDC7	YDL017W	MSC3	Q05812	728 aa		5.48	□□□□□ -1.53
CDC7	YDL017W	PRM7	Q12459	698 aa		5.48	□□□□□ -1.53
CDC7	YDL017W	YNL146C-A	Q3E7Z1	64 aa		5.48	□□□□□ -1.53
CDC7	YDL017W	RPL15A	P05748	204 aa	Known RBP	5.47	□□□□□ -1.53
CDC7	YDL017W	YCR041W	P37265	110 aa		5.47	□□□□□ -1.53
CDC7	YDL017W	CAX4	P53223	239 aa		5.47	□□□□□ -1.53
CDC7	YDL017W	YDR042C	Q03205	200 aa		5.47	□□□□□ -1.53
CDC7	YDL017W	UTP20	P35194	2493 aa	Known RBP	5.46	□□□□□ -1.54
CDC7	YDL017W	RPL31A	P0C2H8	113 aa	Known RBP	5.46	□□□□□ -1.54
CDC7	YDL017W	YCR023C	P25351	611 aa		5.46	□□□□□ -1.54
CDC7	YDL017W	AGA1	P32323	725 aa		5.46	□□□□□ -1.54
CDC7	YDL017W	VPS71	Q03433	280 aa		5.46	□□□□□ -1.54
CDC7	YDL017W	YOR011W-A	Q3E807	68 aa		5.46	□□□□□ -1.54
CDC7	YDL017W	YOL085C	Q99345	113 aa		5.46	□□□□□ -1.54
CDC7	YDL017W	PRE1	P22141	198 aa	Known RBP	5.45	□□□□□ -1.54
CDC7	YDL017W	UTR5	P32630	166 aa		5.45	□□□□□ -1.54
CDC7	YDL017W	BET5	Q03630	159 aa		5.45	□□□□□ -1.54
CDC7	YDL017W	PFY1	P07274	126 aa		5.44	□□□□□ -1.54
CDC7	YDL017W	RPL27B	P0C2H7	136 aa	Known RBP	5.44	□□□□□ -1.54
CDC7	YDL017W	HAP3	P13434	144 aa		5.44	□□□□□ -1.54
CDC7	YDL017W	YER076C	P40049	302 aa		5.44	□□□□□ -1.54
CDC7	YDL017W	FCF1	Q05498	189 aa	Predicted RBP	5.44	□□□□□ -1.54
CDC7	YDL017W	PRM3	Q08931	133 aa		5.44	□□□□□ -1.54
CDC7	YDL017W	MRPL23	Q12487	163 aa	Predicted RBP	5.44	□□□□□ -1.54
CDC7	YDL017W	SAL1	D6W196	494 aa		5.43	□□□□□ -1.54
CDC7	YDL017W	VAR1	P02381	398 aa		5.43	□□□□□ -1.54
CDC7	YDL017W	AQY1	P0CD91	305 aa		5.43	□□□□□ -1.54
CDC7	YDL017W	KTI12	P34253	313 aa	Known RBP	5.43	□□□□□ -1.54
CDC7	YDL017W	APS1	P35181	156 aa		5.43	□□□□□ -1.54
CDC7	YDL017W	YER135C	P40082	130 aa		5.43	□□□□□ -1.54
CDC7	YDL017W	FIP1	P45976	327 aa		5.43	□□□□□ -1.54
CDC7	YDL017W	ATP23	P53722	227 aa		5.43	□□□□□ -1.54
CDC7	YDL017W	YBR200W-A	Q3E755	54 aa		5.43	□□□□□ -1.54
CDC7	YDL017W	STF1	P01098	86 aa		5.43	□□□□□ -1.54
CDC7	YDL017W	TVP18	Q04767	167 aa		5.43	□□□□□ -1.54
CDC7	YDL017W	RRG8	Q06109	277 aa		5.43	□□□□□ -1.54
CDC7	YDL017W	PCL2	P25693	308 aa		5.42	□□□□□ -1.54
CDC7	YDL017W	UIP3	P39547	235 aa		5.42	□□□□□ -1.54
CDC7	YDL017W	SIM1	P40472	476 aa		5.42	□□□□□ -1.54
CDC7	YDL017W	KEG1	P43614	200 aa		5.42	□□□□□ -1.54
CDC7	YDL017W	TOS6	P48560	102 aa		5.42	□□□□□ -1.54
CDC7	YDL017W	DUO1	P53168	247 aa	Known RBP	5.42	□□□□□ -1.54
CDC7	YDL017W	YMR244W	Q04018	355 aa		5.42	□□□□□ -1.54
CDC7	YDL017W	TAR1	Q8TGM6	124 aa		5.42	□□□□□ -1.54
CDC7	YDL017W	ELF1	P36053	145 aa		5.41	□□□□□ -1.54
CDC7	YDL017W	YKR070W	P36151	352 aa	Known RBP	5.41	□□□□□ -1.54
CDC7	YDL017W	MIG3	P39943	394 aa		5.41	□□□□□ -1.54
CDC7	YDL017W	YMR103C	Q04436	120 aa		5.41	□□□□□ -1.54
CDC7	YDL017W	YLR112W	Q12130	139 aa		5.41	□□□□□ -1.54
CDC7	YDL017W	RPL42A	P0CX27	106 aa	Known RBP	5.4	□□□□□ -1.54
CDC7	YDL017W	RPL42B	P0CX28	106 aa	Known RBP	5.4	□□□□□ -1.54
CDC7	YDL017W	MRPS8	Q03799	155 aa		5.4	□□□□□ -1.54
CDC7	YDL017W	DGA1	Q08650	418 aa		5.4	□□□□□ -1.54
CDC7	YDL017W	YPR053C	Q6Q5F3	151 aa		5.4	□□□□□ -1.54
CDC7	YDL017W	YKL044W	P36092	106 aa		5.39	□□□□□ -1.55
CDC7	YDL017W	GLO1	P50107	326 aa		5.39	□□□□□ -1.55
CDC7	YDL017W	YDR366C	P87287	132 aa		5.39	□□□□□ -1.55
CDC7	YDL017W	CCW14	O13547	238 aa		5.38	□□□□□ -1.55
CDC7	YDL017W	RPL16B	P26785	198 aa	Known RBP	5.38	□□□□□ -1.55
CDC7	YDL017W	MIC26	P50087	233 aa		5.38	□□□□□ -1.55
CDC7	YDL017W	COA3	Q3E7B2	85 aa		5.38	□□□□□ -1.55
CDC7	YDL017W	Q0255	P03881	472 aa		5.38	□□□□□ -1.55
CDC7	YDL017W	HMRA2	P0CY13	119 aa		5.38	□□□□□ -1.55
CDC7	YDL017W	YFR035C	P43608	114 aa		5.38	□□□□□ -1.55
CDC7	YDL017W	CWC27	Q02770	301 aa		5.38	□□□□□ -1.55
CDC7	YDL017W	YHR212W-A	P0CX91	67 aa		5.37	□□□□□ -1.55
CDC7	YDL017W	YKL070W	P36087	169 aa		5.36	□□□□□ -1.55
CDC7	YDL017W	PRY2	P36110	329 aa		5.36	□□□□□ -1.55
CDC7	YDL017W	DCV1	P43595	202 aa		5.36	□□□□□ -1.55
CDC7	YDL017W	ALG13	P53178	202 aa		5.36	□□□□□ -1.55
CDC7	YDL017W	AIM34	Q03673	198 aa		5.36	□□□□□ -1.55
CDC7	YDL017W	DFM1	Q12743	341 aa	Known RBP	5.36	□□□□□ -1.55
CDC7	YDL017W	YLR363W-A	Q3E747	85 aa		5.36	□□□□□ -1.55
CDC7	YDL017W	YOR008C-A	Q3E7B9	74 aa		5.36	□□□□□ -1.55
CDC7	YDL017W	YPR170W-B	P0C5R9	85 aa		5.35	□□□□□ -1.55
CDC7	YDL017W	YCL042W	P25572	119 aa		5.34	□□□□□ -1.55
CDC7	YDL017W	MRP49	P32388	137 aa		5.34	□□□□□ -1.55
CDC7	YDL017W	RRT13	P40042	185 aa		5.34	□□□□□ -1.55
CDC7	YDL017W	YPL073C	P40323	161 aa		5.34	□□□□□ -1.55
CDC7	YDL017W	YLR042C	Q07990	161 aa		5.34	□□□□□ -1.55
CDC7	YDL017W	MBF1	O14467	151 aa	Known RBP	5.33	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms