RNA–Protein interactions for RNA: YCL049C

YCL049C, Transcript of Protein of unknown function, yeast

Gene YCL049C, Length 939 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL049C	YCL049C	SNU23	Q12368	194 aa	Predicted RBP	5.06	□□□□□ -1.6
YCL049C	YCL049C	ZRT1	P32804	376 aa		5.05	□□□□□ -1.6
YCL049C	YCL049C	YNL217W	P40152	326 aa		5.05	□□□□□ -1.6
YCL049C	YCL049C	PAU5	P43575	122 aa		5.05	□□□□□ -1.6
YCL049C	YCL049C	SDS23	P53172	527 aa		5.05	□□□□□ -1.6
YCL049C	YCL049C	GTO3	Q04806	366 aa		5.05	□□□□□ -1.6
YCL049C	YCL049C	ARC18	Q05933	178 aa	Known RBP	5.05	□□□□□ -1.6
YCL049C	YCL049C	YLR042C	Q07990	161 aa		5.05	□□□□□ -1.6
YCL049C	YCL049C	RPL27A	P0C2H6	136 aa	Known RBP	5.04	□□□□□ -1.6
YCL049C	YCL049C	MRPL28	P36527	147 aa		5.04	□□□□□ -1.6
YCL049C	YCL049C	SDH8	P38345	138 aa		5.04	□□□□□ -1.6
YCL049C	YCL049C	PAU7	P39545	55 aa		5.04	□□□□□ -1.6
YCL049C	YCL049C	YBR126W-A	Q8TGU7	68 aa		5.04	□□□□□ -1.6
YCL049C	YCL049C	FRS1	P15624	595 aa	Known RBP	5.03	□□□□□ -1.6
YCL049C	YCL049C	YCR023C	P25351	611 aa		5.03	□□□□□ -1.6
YCL049C	YCL049C	YPT53	P36019	220 aa		5.03	□□□□□ -1.6
YCL049C	YCL049C	KRE9	P39005	276 aa		5.03	□□□□□ -1.6
YCL049C	YCL049C	YCH1	P42937	148 aa		5.03	□□□□□ -1.6
YCL049C	YCL049C	HHO1	P53551	258 aa		5.03	□□□□□ -1.6
YCL049C	YCL049C	ATP23	P53722	227 aa		5.03	□□□□□ -1.6
YCL049C	YCL049C	RPL23A	P0CX41	137 aa	Known RBP	5.02	□□□□□ -1.61
YCL049C	YCL049C	RPL23B	P0CX42	137 aa	Known RBP	5.02	□□□□□ -1.61
YCL049C	YCL049C	SUR2	P38992	349 aa		5.02	□□□□□ -1.61
YCL049C	YCL049C	RPR2	P40571	144 aa		5.02	□□□□□ -1.61
YCL049C	YCL049C	ATG33	Q06485	197 aa		5.02	□□□□□ -1.61
YCL049C	YCL049C	ELF1	P36053	145 aa		5.01	□□□□□ -1.61
YCL049C	YCL049C	YKR032W	P36127	104 aa		5.01	□□□□□ -1.61
YCL049C	YCL049C	IRC22	P40006	225 aa		5.01	□□□□□ -1.61
YCL049C	YCL049C	TVP18	Q04767	167 aa		5.01	□□□□□ -1.61
YCL049C	YCL049C	ZEO1	Q08245	113 aa		5.01	□□□□□ -1.61
YCL049C	YCL049C	DGA1	Q08650	418 aa		5.01	□□□□□ -1.61
YCL049C	YCL049C	FSF1	Q12029	327 aa	Known RBP	5.01	□□□□□ -1.61
YCL049C	YCL049C	POM33	Q12164	279 aa		5.01	□□□□□ -1.61
YCL049C	YCL049C	YGR240C-A	Q3E786	66 aa		5.01	□□□□□ -1.61
YCL049C	YCL049C	YCR024C-B	Q3E7Z8	88 aa		5.01	□□□□□ -1.61
YCL049C	YCL049C	POR1	P04840	283 aa	Known RBP	5	□□□□□ -1.61
YCL049C	YCL049C	SEC4	P07560	215 aa	Known RBP	5	□□□□□ -1.61
YCL049C	YCL049C	PET8	P38921	284 aa		5	□□□□□ -1.61
YCL049C	YCL049C	CRC1	Q12289	327 aa		5	□□□□□ -1.61
YCL049C	YCL049C	PAU19	P0CE85	124 aa		4.99	□□□□□ -1.61
YCL049C	YCL049C	PAU21	P0CE86	164 aa		4.99	□□□□□ -1.61
YCL049C	YCL049C	PAU22	P0CE87	164 aa		4.99	□□□□□ -1.61
YCL049C	YCL049C	PAU3	P25610	124 aa		4.99	□□□□□ -1.61
YCL049C	YCL049C	KTI12	P34253	313 aa	Known RBP	4.99	□□□□□ -1.61
YCL049C	YCL049C	YGR149W	P48236	432 aa		4.99	□□□□□ -1.61
YCL049C	YCL049C	WIP1	Q2V2P8	89 aa		4.99	□□□□□ -1.61
YCL049C	YCL049C	GTT1	P40582	234 aa		4.98	□□□□□ -1.61
YCL049C	YCL049C	TIM11	P81449	96 aa	Predicted RBP	4.98	□□□□□ -1.61
YCL049C	YCL049C	RPL42A	P0CX27	106 aa	Known RBP	4.97	□□□□□ -1.61
YCL049C	YCL049C	RPL42B	P0CX28	106 aa	Known RBP	4.97	□□□□□ -1.61
YCL049C	YCL049C	TEM1	P38987	245 aa		4.97	□□□□□ -1.61
YCL049C	YCL049C	CDC40	P40968	455 aa	Predicted RBP	4.97	□□□□□ -1.61
YCL049C	YCL049C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
YCL049C	YCL049C	RPS22B	Q3E7Y3	130 aa	Known RBP	4.97	□□□□□ -1.61
YCL049C	YCL049C	DCV1	P43595	202 aa		4.96	□□□□□ -1.62
YCL049C	YCL049C	SAL1	D6W196	494 aa		4.95	□□□□□ -1.62
YCL049C	YCL049C	PMP3	P87284	55 aa		4.95	□□□□□ -1.62
YCL049C	YCL049C	CYT2	Q00873	224 aa		4.95	□□□□□ -1.62
YCL049C	YCL049C	DPP1	Q05521	289 aa		4.95	□□□□□ -1.62
YCL049C	YCL049C	YPR014C	Q6B0W2	109 aa		4.95	□□□□□ -1.62
YCL049C	YCL049C	UBC5	P15732	148 aa		4.94	□□□□□ -1.62
YCL049C	YCL049C	YER076C	P40049	302 aa		4.93	□□□□□ -1.62
YCL049C	YCL049C	YNL200C	P40165	246 aa	Known RBP	4.93	□□□□□ -1.62
YCL049C	YCL049C	SPC1	P46965	94 aa		4.93	□□□□□ -1.62
YCL049C	YCL049C	GLO1	P50107	326 aa		4.93	□□□□□ -1.62
YCL049C	YCL049C	YGL088W	P53151	121 aa		4.93	□□□□□ -1.62
YCL049C	YCL049C	YIL014C-A	Q02598	104 aa		4.93	□□□□□ -1.62
YCL049C	YCL049C	PBA1	Q05778	276 aa		4.93	□□□□□ -1.62
YCL049C	YCL049C	YPR195C	Q06594	109 aa		4.93	□□□□□ -1.62
YCL049C	YCL049C	RPL11A	P0C0W9	174 aa	Known RBP	4.92	□□□□□ -1.62
YCL049C	YCL049C	PRE1	P22141	198 aa	Known RBP	4.92	□□□□□ -1.62
YCL049C	YCL049C	YBR209W	P38311	105 aa		4.92	□□□□□ -1.62
YCL049C	YCL049C	ARL3	Q02804	198 aa		4.92	□□□□□ -1.62
YCL049C	YCL049C	YML108W	Q03759	105 aa		4.92	□□□□□ -1.62
YCL049C	YCL049C	RPL11B	Q3E757	174 aa	Predicted RBP	4.92	□□□□□ -1.62
YCL049C	YCL049C	YLL066W-B	Q8TGJ7	56 aa		4.92	□□□□□ -1.62
YCL049C	YCL049C	PFY1	P07274	126 aa		4.91	□□□□□ -1.62
YCL049C	YCL049C	SEC72	P39742	193 aa	Known RBP	4.91	□□□□□ -1.62
YCL049C	YCL049C	ARC15	P40518	154 aa	RIP-Chip data	4.91	□□□□□ -1.62	not detected
YCL049C	YCL049C	YIL059C	P40520	121 aa		4.91	□□□□□ -1.62
YCL049C	YCL049C	DIF1	O13577	133 aa		4.9	□□□□□ -1.63
YCL049C	YCL049C	AQY1	P0CD91	305 aa		4.9	□□□□□ -1.63
YCL049C	YCL049C	YKR070W	P36151	352 aa	Known RBP	4.9	□□□□□ -1.63
YCL049C	YCL049C	YJL028W	P47062	111 aa		4.9	□□□□□ -1.63
YCL049C	YCL049C	MGR2	Q02889	113 aa		4.9	□□□□□ -1.63
YCL049C	YCL049C	RRT15	Q3E811	62 aa		4.9	□□□□□ -1.63
YCL049C	YCL049C	YMR122W-A	Q3E842	84 aa		4.9	□□□□□ -1.63
YCL049C	YCL049C	RPL33A	P05744	107 aa	Known RBP	4.89	□□□□□ -1.63
YCL049C	YCL049C	RPL16A	P26784	199 aa	Known RBP	4.89	□□□□□ -1.63
YCL049C	YCL049C	GSP1	P32835	219 aa	Known RBP	4.89	□□□□□ -1.63
YCL049C	YCL049C	GSP2	P32836	220 aa	Known RBP	4.89	□□□□□ -1.63
YCL049C	YCL049C	AIM29	P36154	155 aa		4.89	□□□□□ -1.63
YCL049C	YCL049C	SVP26	P38869	228 aa		4.89	□□□□□ -1.63
YCL049C	YCL049C	YER134C	P40081	178 aa		4.89	□□□□□ -1.63
YCL049C	YCL049C	RPL33B	P41056	107 aa	Known RBP	4.89	□□□□□ -1.63
YCL049C	YCL049C	ERI1	P62651	68 aa	Known RBP	4.89	□□□□□ -1.63
YCL049C	YCL049C	MRP49	P32388	137 aa		4.88	□□□□□ -1.63
YCL049C	YCL049C	YJR146W	P47174	117 aa		4.88	□□□□□ -1.63
YCL049C	YCL049C	YGL118C	P53132	145 aa		4.88	□□□□□ -1.63
YCL049C	YCL049C	RTC6	O14464	93 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms