RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	SEC11	P15367	167 aa		2.62	□□□□□ -1.99
CMD1	YBR109C	UTH1	P36135	365 aa		2.62	□□□□□ -1.99
CMD1	YBR109C	YER121W	P40076	114 aa		2.62	□□□□□ -1.99
CMD1	YBR109C	PIR5	P46999	287 aa		2.62	□□□□□ -1.99
CMD1	YBR109C	DAD4	P69851	72 aa		2.62	□□□□□ -1.99
CMD1	YBR109C	RAV2	Q03956	351 aa		2.62	□□□□□ -1.99
CMD1	YBR109C	YHP1	Q04116	353 aa		2.62	□□□□□ -1.99
CMD1	YBR109C	MSC3	Q05812	728 aa		2.62	□□□□□ -1.99
CMD1	YBR109C	CSI2	Q08054	341 aa		2.62	□□□□□ -1.99
CMD1	YBR109C	FSF1	Q12029	327 aa	Known RBP	2.62	□□□□□ -1.99
CMD1	YBR109C	SAL1	D6W196	494 aa		2.61	□□□□□ -1.99
CMD1	YBR109C	PHO85	P17157	305 aa		2.61	□□□□□ -1.99
CMD1	YBR109C	DAL80	P26343	269 aa		2.61	□□□□□ -1.99
CMD1	YBR109C	GPI18	P38211	433 aa		2.61	□□□□□ -1.99
CMD1	YBR109C	LST8	P41318	303 aa		2.61	□□□□□ -1.99
CMD1	YBR109C	YCH1	P42937	148 aa		2.61	□□□□□ -1.99
CMD1	YBR109C	YGR017W	P53210	297 aa		2.61	□□□□□ -1.99
CMD1	YBR109C	CAB4	P53332	305 aa		2.61	□□□□□ -1.99
CMD1	YBR109C	POP3	P53833	195 aa	Predicted RBP	2.61	□□□□□ -1.99
CMD1	YBR109C	ADH6	Q04894	360 aa	Known RBP	2.61	□□□□□ -1.99
CMD1	YBR109C	YLR342W-A	Q3E810	57 aa		2.61	□□□□□ -1.99
CMD1	YBR109C	YPR170W-B	P0C5R9	85 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	YCR023C	P25351	611 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	IES6	P32617	166 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	PRY2	P36110	329 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	YHL044W	P38727	235 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	YHR140W	P38842	239 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	AGE2	P40529	298 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	YJL028W	P47062	111 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	YGR018C	P53211	109 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	TOM7	P53507	60 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	VPS71	Q03433	280 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	GPI19	Q04082	140 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	ATG39	Q06159	398 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	FOL3	Q12676	427 aa	Predicted RBP	2.6	□□□□□ -1.99
CMD1	YBR109C	YKL023C-A	Q2V2P3	75 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	YIL102C-A	Q2V2P5	75 aa		2.6	□□□□□ -1.99
CMD1	YBR109C	HYP2	P23301	157 aa	Known RBP	2.59	□□□□□ -1.99
CMD1	YBR109C	LSM2	P38203	95 aa	Known RBP	2.59	□□□□□ -1.99
CMD1	YBR109C	POR2	P40478	281 aa		2.59	□□□□□ -1.99
CMD1	YBR109C	YIL012W	P40551	113 aa		2.59	□□□□□ -1.99
CMD1	YBR109C	BRP1	P53194	125 aa		2.59	□□□□□ -1.99
CMD1	YBR109C	DIA1	P54005	336 aa		2.59	□□□□□ -1.99
CMD1	YBR109C	ELC1	Q03071	99 aa		2.59	□□□□□ -1.99
CMD1	YBR109C	YDR042C	Q03205	200 aa		2.59	□□□□□ -1.99
CMD1	YBR109C	ATO3	Q12359	275 aa		2.59	□□□□□ -1.99
CMD1	YBR109C	SCS22	Q6Q595	175 aa		2.59	□□□□□ -1.99
CMD1	YBR109C	YDR034W-B	Q6Q5X2	51 aa		2.59	□□□□□ -1.99
CMD1	YBR109C	MBF1	O14467	151 aa	Known RBP	2.58	□□□□□ -2
CMD1	YBR109C	RPL39	P04650	51 aa		2.58	□□□□□ -2
CMD1	YBR109C	YER181C	P40097	107 aa		2.58	□□□□□ -2
CMD1	YBR109C	YNL217W	P40152	326 aa		2.58	□□□□□ -2
CMD1	YBR109C	YNL200C	P40165	246 aa	Known RBP	2.58	□□□□□ -2
CMD1	YBR109C	YPL073C	P40323	161 aa		2.58	□□□□□ -2
CMD1	YBR109C	IGD1	P43598	195 aa		2.58	□□□□□ -2
CMD1	YBR109C	HAL1	Q01766	294 aa		2.58	□□□□□ -2
CMD1	YBR109C	YDR114C	Q04597	100 aa		2.58	□□□□□ -2
CMD1	YBR109C	TIM22	Q12328	207 aa		2.58	□□□□□ -2
CMD1	YBR109C	SLO1	Q3E784	85 aa		2.58	□□□□□ -2
CMD1	YBR109C	YMR105W-A	Q8TGS8	64 aa		2.58	□□□□□ -2
CMD1	YBR109C	PFY1	P07274	126 aa		2.57	□□□□□ -2
CMD1	YBR109C	FZF1	P32805	299 aa		2.57	□□□□□ -2
CMD1	YBR109C	MRPL38	P35996	138 aa	Predicted RBP	2.57	□□□□□ -2
CMD1	YBR109C	YBR090C	P38253	122 aa		2.57	□□□□□ -2
CMD1	YBR109C	YHL037C	P38733	133 aa		2.57	□□□□□ -2
CMD1	YBR109C	SNF11	P38956	169 aa		2.57	□□□□□ -2
CMD1	YBR109C	YER188W	P40103	239 aa		2.57	□□□□□ -2
CMD1	YBR109C	TOS6	P48560	102 aa		2.57	□□□□□ -2
CMD1	YBR109C	SWT21	P53873	357 aa	Predicted RBP	2.57	□□□□□ -2
CMD1	YBR109C	MGR2	Q02889	113 aa		2.57	□□□□□ -2
CMD1	YBR109C	MIX17	Q03667	156 aa		2.57	□□□□□ -2
CMD1	YBR109C	YMR103C	Q04436	120 aa		2.57	□□□□□ -2
CMD1	YBR109C	YLR296W	Q05898	108 aa		2.57	□□□□□ -2
CMD1	YBR109C	CCW14	O13547	238 aa		2.56	□□□□□ -2
CMD1	YBR109C	RPL18A	P0CX49	186 aa	Known RBP	2.56	□□□□□ -2
CMD1	YBR109C	RPL18B	P0CX50	186 aa	Known RBP	2.56	□□□□□ -2
CMD1	YBR109C	NHP2	P32495	156 aa	Predicted RBP	2.56	□□□□□ -2
CMD1	YBR109C	ECM33	P38248	429 aa	Known RBP	2.56	□□□□□ -2
CMD1	YBR109C	YER076C	P40049	302 aa		2.56	□□□□□ -2
CMD1	YBR109C	IMP2	P46972	177 aa		2.56	□□□□□ -2
CMD1	YBR109C	SBH2	P52871	88 aa		2.56	□□□□□ -2
CMD1	YBR109C	SED1	Q01589	338 aa		2.56	□□□□□ -2
CMD1	YBR109C	IGO2	Q9P305	131 aa		2.56	□□□□□ -2
CMD1	YBR109C	YHR213W	P0CI67	198 aa		2.55	□□□□□ -2
CMD1	YBR109C	MIG1	P27705	504 aa		2.55	□□□□□ -2
CMD1	YBR109C	YKR041W	P36134	250 aa		2.55	□□□□□ -2
CMD1	YBR109C	ATX1	P38636	73 aa		2.55	□□□□□ -2
CMD1	YBR109C	ECM14	P38836	430 aa		2.55	□□□□□ -2
CMD1	YBR109C	YGR219W	P53307	113 aa		2.55	□□□□□ -2
CMD1	YBR109C	YIL014C-A	Q02598	104 aa		2.55	□□□□□ -2
CMD1	YBR109C	YDR115W	Q04598	105 aa		2.55	□□□□□ -2
CMD1	YBR109C	FCF1	Q05498	189 aa	Predicted RBP	2.55	□□□□□ -2
CMD1	YBR109C	RRG8	Q06109	277 aa		2.55	□□□□□ -2
CMD1	YBR109C	YPR117W	Q06116	2489 aa		2.55	□□□□□ -2
CMD1	YBR109C	YOR008C-A	Q3E7B9	74 aa		2.55	□□□□□ -2
CMD1	YBR109C	ADH1	P00330	348 aa	Known RBP	2.54	□□□□□ -2
CMD1	YBR109C	HMRA2	P0CY13	119 aa		2.54	□□□□□ -2
CMD1	YBR109C	KTI12	P34253	313 aa	Known RBP	2.54	□□□□□ -2
CMD1	YBR109C	YKL070W	P36087	169 aa		2.54	□□□□□ -2
CMD1	YBR109C	SPI1	P40092	148 aa		2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms