RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS1, Length 978 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS1	YAL018C	FRS1	P15624	595 aa	Known RBP	4.58	□□□□□ -1.68
LDS1	YAL018C	ZRT1	P32804	376 aa		4.58	□□□□□ -1.68
LDS1	YAL018C	URM1	P40554	99 aa	Predicted RBP	4.58	□□□□□ -1.68
LDS1	YAL018C	COX12	Q01519	83 aa		4.58	□□□□□ -1.68
LDS1	YAL018C	GPI19	Q04082	140 aa		4.58	□□□□□ -1.68
LDS1	YAL018C	GTO3	Q04806	366 aa		4.58	□□□□□ -1.68
LDS1	YAL018C	MSC3	Q05812	728 aa		4.58	□□□□□ -1.68
LDS1	YAL018C	YCR075W-A	Q3E830	75 aa		4.58	□□□□□ -1.68
LDS1	YAL018C	Q0255	P03881	472 aa		4.57	□□□□□ -1.68
LDS1	YAL018C	BRP1	P53194	125 aa		4.57	□□□□□ -1.68
LDS1	YAL018C	CYT2	Q00873	224 aa		4.57	□□□□□ -1.68
LDS1	YAL018C	ARL3	Q02804	198 aa		4.57	□□□□□ -1.68
LDS1	YAL018C	WIP1	Q2V2P8	89 aa		4.57	□□□□□ -1.68
LDS1	YAL018C	YBR126W-A	Q8TGU7	68 aa		4.57	□□□□□ -1.68
LDS1	YAL018C	RPL23A	P0CX41	137 aa	Known RBP	4.56	□□□□□ -1.68
LDS1	YAL018C	RPL23B	P0CX42	137 aa	Known RBP	4.56	□□□□□ -1.68
LDS1	YAL018C	YGR149W	P48236	432 aa		4.56	□□□□□ -1.68
LDS1	YAL018C	SDS23	P53172	527 aa		4.56	□□□□□ -1.68
LDS1	YAL018C	YBR200W-A	Q3E755	54 aa		4.56	□□□□□ -1.68
LDS1	YAL018C	YOL085C	Q99345	113 aa		4.56	□□□□□ -1.68
LDS1	YAL018C	MRPL28	P36527	147 aa		4.55	□□□□□ -1.68
LDS1	YAL018C	VHS2	P40463	436 aa		4.55	□□□□□ -1.68
LDS1	YAL018C	YGL118C	P53132	145 aa		4.55	□□□□□ -1.68
LDS1	YAL018C	YGR017W	P53210	297 aa		4.55	□□□□□ -1.68
LDS1	YAL018C	AIM34	Q03673	198 aa		4.55	□□□□□ -1.68
LDS1	YAL018C	TVP18	Q04767	167 aa		4.55	□□□□□ -1.68
LDS1	YAL018C	FSF1	Q12029	327 aa	Known RBP	4.55	□□□□□ -1.68
LDS1	YAL018C	YCR024C-B	Q3E7Z8	88 aa		4.55	□□□□□ -1.68
LDS1	YAL018C	RPL16B	P26785	198 aa	Known RBP	4.54	□□□□□ -1.68
LDS1	YAL018C	SEC72	P39742	193 aa	Known RBP	4.54	□□□□□ -1.68
LDS1	YAL018C	VAM10	Q08474	114 aa		4.54	□□□□□ -1.68
LDS1	YAL018C	SEC4	P07560	215 aa	Known RBP	4.53	□□□□□ -1.68
LDS1	YAL018C	RPL42A	P0CX27	106 aa	Known RBP	4.53	□□□□□ -1.68
LDS1	YAL018C	RPL42B	P0CX28	106 aa	Known RBP	4.53	□□□□□ -1.68
LDS1	YAL018C	HTL1	Q9URQ5	78 aa		4.53	□□□□□ -1.68
LDS1	YAL018C	RPS8A	P0CX39	200 aa	Known RBP	4.52	□□□□□ -1.69
LDS1	YAL018C	RPS8B	P0CX40	200 aa	Known RBP	4.52	□□□□□ -1.69
LDS1	YAL018C	SSS1	P35179	80 aa		4.52	□□□□□ -1.69
LDS1	YAL018C	YPT53	P36019	220 aa		4.52	□□□□□ -1.69
LDS1	YAL018C	YKL069W	P36088	180 aa		4.52	□□□□□ -1.69
LDS1	YAL018C	RRT13	P40042	185 aa		4.52	□□□□□ -1.69
LDS1	YAL018C	SGF11	Q03067	99 aa		4.52	□□□□□ -1.69
LDS1	YAL018C	CUE4	Q04201	117 aa	Predicted RBP	4.52	□□□□□ -1.69
LDS1	YAL018C	DXO1	Q06349	442 aa		4.52	□□□□□ -1.69
LDS1	YAL018C	COA6	Q3E846	104 aa		4.52	□□□□□ -1.69
LDS1	YAL018C	KTI12	P34253	313 aa	Known RBP	4.51	□□□□□ -1.69
LDS1	YAL018C	TEM1	P38987	245 aa		4.51	□□□□□ -1.69
LDS1	YAL018C	YFR035C	P43608	114 aa		4.51	□□□□□ -1.69
LDS1	YAL018C	DUO1	P53168	247 aa	Known RBP	4.51	□□□□□ -1.69
LDS1	YAL018C	YGR240C-A	Q3E786	66 aa		4.51	□□□□□ -1.69
LDS1	YAL018C	YPS5	P53057	165 aa		4.5	□□□□□ -1.69
LDS1	YAL018C	YLR042C	Q07990	161 aa		4.5	□□□□□ -1.69
LDS1	YAL018C	SAL1	D6W196	494 aa		4.49	□□□□□ -1.69
LDS1	YAL018C	PFY1	P07274	126 aa		4.49	□□□□□ -1.69
LDS1	YAL018C	YCR001W	P25347	104 aa		4.49	□□□□□ -1.69
LDS1	YAL018C	YKR032W	P36127	104 aa		4.49	□□□□□ -1.69
LDS1	YAL018C	YKR070W	P36151	352 aa	Known RBP	4.49	□□□□□ -1.69
LDS1	YAL018C	NRG2	P38082	220 aa		4.49	□□□□□ -1.69
LDS1	YAL018C	SDH8	P38345	138 aa		4.49	□□□□□ -1.69
LDS1	YAL018C	ERV14	P53173	138 aa		4.49	□□□□□ -1.69
LDS1	YAL018C	MGR2	Q02889	113 aa		4.49	□□□□□ -1.69
LDS1	YAL018C	YCR023C	P25351	611 aa		4.48	□□□□□ -1.69
LDS1	YAL018C	GSP1	P32835	219 aa	Known RBP	4.48	□□□□□ -1.69
LDS1	YAL018C	GSP2	P32836	220 aa	Known RBP	4.48	□□□□□ -1.69
LDS1	YAL018C	DCV1	P43595	202 aa		4.48	□□□□□ -1.69
LDS1	YAL018C	OST3	P48439	350 aa		4.48	□□□□□ -1.69
LDS1	YAL018C	ATP23	P53722	227 aa		4.48	□□□□□ -1.69
LDS1	YAL018C	SCW10	Q04951	389 aa		4.48	□□□□□ -1.69
LDS1	YAL018C	AUA1	P32450	94 aa		4.47	□□□□□ -1.69
LDS1	YAL018C	MRPL11	P36521	249 aa	Predicted RBP	4.47	□□□□□ -1.69
LDS1	YAL018C	PET8	P38921	284 aa		4.47	□□□□□ -1.69
LDS1	YAL018C	YER076C	P40049	302 aa		4.47	□□□□□ -1.69
LDS1	YAL018C	YNL217W	P40152	326 aa		4.47	□□□□□ -1.69
LDS1	YAL018C	YNL200C	P40165	246 aa	Known RBP	4.47	□□□□□ -1.69
LDS1	YAL018C	TOS6	P48560	102 aa		4.47	□□□□□ -1.69
LDS1	YAL018C	GLO1	P50107	326 aa		4.47	□□□□□ -1.69
LDS1	YAL018C	PMP3	P87284	55 aa		4.47	□□□□□ -1.69
LDS1	YAL018C	HAL1	Q01766	294 aa		4.47	□□□□□ -1.69
LDS1	YAL018C	YIL014C-A	Q02598	104 aa		4.47	□□□□□ -1.69
LDS1	YAL018C	CNL1	Q06333	122 aa		4.47	□□□□□ -1.69
LDS1	YAL018C	DGA1	Q08650	418 aa		4.47	□□□□□ -1.69
LDS1	YAL018C	ERG27	Q12452	347 aa	Known RBP	4.47	□□□□□ -1.69
LDS1	YAL018C	YER134C	P40081	178 aa		4.46	□□□□□ -1.7
LDS1	YAL018C	ERI1	P62651	68 aa	Known RBP	4.46	□□□□□ -1.7
LDS1	YAL018C	FCF1	Q05498	189 aa	Predicted RBP	4.46	□□□□□ -1.7
LDS1	YAL018C	RDS3	Q06835	107 aa	Predicted RBP	4.46	□□□□□ -1.7
LDS1	YAL018C	YOR008C-A	Q3E7B9	74 aa		4.46	□□□□□ -1.7
LDS1	YAL018C	YPR014C	Q6B0W2	109 aa		4.46	□□□□□ -1.7
LDS1	YAL018C	RPL27B	P0C2H7	136 aa	Known RBP	4.45	□□□□□ -1.7
LDS1	YAL018C	PAU16	P35994	123 aa		4.45	□□□□□ -1.7
LDS1	YAL018C	KRE9	P39005	276 aa		4.45	□□□□□ -1.7
LDS1	YAL018C	CDC40	P40968	455 aa	Predicted RBP	4.45	□□□□□ -1.7
LDS1	YAL018C	CGR1	P53188	120 aa		4.45	□□□□□ -1.7
LDS1	YAL018C	YDR042C	Q03205	200 aa		4.45	□□□□□ -1.7
LDS1	YAL018C	AQY1	P0CD91	305 aa		4.44	□□□□□ -1.7
LDS1	YAL018C	UBC5	P15732	148 aa		4.44	□□□□□ -1.7
LDS1	YAL018C	PCL2	P25693	308 aa		4.44	□□□□□ -1.7
LDS1	YAL018C	MRP49	P32388	137 aa		4.44	□□□□□ -1.7
LDS1	YAL018C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.44	□□□□□ -1.7	not detected
LDS1	YAL018C	LSM8	P47093	109 aa	Known RBP	4.44	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms