RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 POF1BQ8WVV4 589 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 FAXDC2Q96IV6 333 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 SUSD3Q96L08 255 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 CDCA3Q99618 268 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-224ENST00000641711 CARD9Q9H257 536 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 GOLPH3Q9H4A6 298 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 VRTNQ9H8Y1 702 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 OSGEPQ9NPF4 335 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 SEPT11Q9NVA2 429 aaKnown RBP10.88□□□□□ -0.67
PHGDH-224ENST00000641711 MTMR10Q9NXD2 777 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 DPP3Q9NY33 737 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 UVRAGQ9P2Y5 699 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 TUBGCP4Q9UGJ1 667 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 DMGDHQ9UI17 866 aaKnown RBP10.88□□□□□ -0.67
PHGDH-224ENST00000641711 GTF3C4Q9UKN8 822 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 MTUS1Q9ULD2 1270 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 COG5Q9UP83 839 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 NUB1Q9Y5A7 615 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 PTPRJQ12913 1337 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 EPOPA6NHQ4 379 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 M0QZQ0 153 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 GRM6O15303 877 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 CEP104O60308 925 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 TADA2AO75478 443 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 VNN1O95497 513 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 MMEP08473 750 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 FAM163BP0C2L3 166 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 TYMPP19971 482 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 ACO1P21399 889 aaKnown RBP10.87□□□□□ -0.67
PHGDH-224ENST00000641711 TBXAS1P24557 533 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-224ENST00000641711 PIK3CAP42336 1068 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 GLUD2P49448 558 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 CLCNKBP51801 687 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 DSG1Q02413 1049 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 MYO1EQ12965 1108 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 PPP2R5EQ16537 467 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 CLEC16AQ2KHT3 1053 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 EMBQ6PCB8 327 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 TRIM72Q6ZMU5 477 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 SPRED2Q7Z698 418 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 TMEM173Q86WV6 379 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-224ENST00000641711 APPL2Q8NEU8 664 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 HDAC7Q8WUI4 952 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.87□□□□□ -0.67
PHGDH-224ENST00000641711 PIK3R5Q8WYR1 880 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 CAVIN3Q969G5 261 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 C18orf25Q96B23 403 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-224ENST00000641711 MTMR12Q9C0I1 747 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 CXCL16Q9H2A7 254 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 PRDM12Q9H4Q4 367 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 FAM124BQ9H5Z6 455 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-224ENST00000641711 NSUN3Q9H649 340 aaKnown RBP10.87□□□□□ -0.67
PHGDH-224ENST00000641711 GOLGA2P5Q9HBQ8 144 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 AVENQ9NQS1 362 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-224ENST00000641711 CHST7Q9NS84 486 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 DSEQ9UL01 958 aa10.87□□□□□ -0.67
PHGDH-224ENST00000641711 MTCL1Q9Y4B5 1905 aaKnown RBP10.87□□□□□ -0.67
PHGDH-224ENST00000641711 NT5C1B-RDH14C9J2C7 533 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 ZMYND10O75800 440 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 MYBL1P10243 752 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 MYBL2P10244 700 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 ODC1P11926 461 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 UNGP13051 313 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-224ENST00000641711 FGFR3P22607 806 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 OAS2P29728 719 aaKnown RBP10.86□□□□□ -0.67
PHGDH-224ENST00000641711 PBX3P40426 434 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 CUL2Q13617 745 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 TAF3Q5VWG9 929 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 PPP1R2P3Q6NXS1 205 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 ANKS3Q6ZW76 656 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 DPH6Q7L8W6 267 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 VPS52Q8N1B4 723 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 UBR7Q8N806 425 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 CXorf38Q8TB03 319 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 BCL7CQ8WUZ0 217 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-224ENST00000641711 TRIM11Q96F44 468 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 GUCD1Q96NT3 240 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 KRT12Q99456 494 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 NAP1L3Q99457 506 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-224ENST00000641711 CDX2Q99626 313 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-224ENST00000641711 PAAF1Q9BRP4 392 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 PI4K2AQ9BTU6 479 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 TTPALQ9BTX7 342 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 IMPG2Q9BZV3 1241 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 SLITRK6Q9H5Y7 841 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 CERS4Q9HA82 394 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 ALG13Q9NP73 1137 aaKnown RBP10.86□□□□□ -0.67
PHGDH-224ENST00000641711 MED4Q9NPJ6 270 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 ENTPD7Q9NQZ7 604 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 MRPL17Q9NRX2 175 aaKnown RBP10.86□□□□□ -0.67
PHGDH-224ENST00000641711 GDAP2Q9NXN4 497 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 FNIP2Q9P278 1114 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 CTTNBP2NLQ9P2B4 639 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 HPCAL4Q9UM19 191 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 PCDHB8Q9UN66 801 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 ALG6Q9Y672 507 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 MTCH2Q9Y6C9 303 aa10.86□□□□□ -0.67
PHGDH-224ENST00000641711 H7C4K7 107 aa10.85□□□□□ -0.67
PHGDH-224ENST00000641711 ASS1P00966 412 aaKnown RBP10.85□□□□□ -0.67
PHGDH-224ENST00000641711 CYP1A1P04798 512 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms