RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 ZMYM5Q9UJ78 669 aa16.98■□□□□ 0.31
CACNA1A-238ENST00000637276 SPACA6W5XKT8 324 aa16.98■□□□□ 0.31
CACNA1A-238ENST00000637276 CACNA1FO60840 1977 aa16.98■□□□□ 0.31
CACNA1A-238ENST00000637276 CIAO1O76071 339 aa16.98■□□□□ 0.31
CACNA1A-238ENST00000637276 IFNA16P05015 189 aa16.98■□□□□ 0.31
CACNA1A-238ENST00000637276 HIRAP54198 1017 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-238ENST00000637276 STX3Q13277 289 aa16.98■□□□□ 0.31
CACNA1A-238ENST00000637276 DHX40Q8IX18 779 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-238ENST00000637276 SERHL2Q9H4I8 314 aa16.98■□□□□ 0.31
CACNA1A-238ENST00000637276 SERHLQ9NQF3 203 aa16.98■□□□□ 0.31
CACNA1A-238ENST00000637276 NR5A2O00482 541 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 CKMP06732 381 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 NSUN6Q8TEA1 469 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 ZFYVE28Q9HCC9 887 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 VTNP04004 478 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 PTPN1P18031 435 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 KLK7P49862 253 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 TFDP2Q14188 446 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 SETD6Q8TBK2 473 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 OVGP1Q12889 678 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 ERMARDQ5T6L9 678 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 GIMAP8Q8ND71 665 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 ACOX2Q99424 681 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 SMPD4Q9NXE4 827 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 ARIH1Q9Y4X5 557 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 PSMC3P17980 439 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 MAGEA9P43362 315 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 EFCAB12Q6NXP0 572 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 RNFT2Q96EX2 444 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 KRCC1Q9NPI7 259 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 CHKBQ9Y259 395 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 SCAMP1O15126 338 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 RNASEH1O60930 286 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 ERCC2P18074 760 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 SERPINB1P30740 379 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 IL6STP40189 918 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 CHI3L2Q15782 390 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 FAAH2Q6GMR7 532 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 RNF31Q96EP0 1072 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 MASTLQ96GX5 879 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 PRKAG3Q9UGI9 489 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 DIS3Q9Y2L1 958 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 ZBTB5O15062 677 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 TMEM179Q6ZVK1 233 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 RBM23Q86U06 439 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 TOR4AQ9NXH8 423 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 CFAP43Q8NDM7 1665 aa16.97■□□□□ 0.31
CACNA1A-238ENST00000637276 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 PHF20L1A8MW92 1017 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 CCDC130P13994 396 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 MICALL2Q8IY33 904 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 CLEC4AQ9UMR7 237 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 MICAL3Q7RTP6 2002 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 CHN1P15882 459 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 ZNF23P17027 643 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 RRM2P31350 389 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 TMEM47Q9BQJ4 181 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 FAM135BQ49AJ0 1406 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 PDZK1P1A8MUH7 402 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 ZNF177Q13360 481 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 AP5B1Q2VPB7 878 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 TRMT6Q9UJA5 497 aaKnown RBP16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 A0A1B0GW55 424 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 SNPHO15079 494 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 TRAPPC3O43617 180 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 DUX4L2P0CJ85 424 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 DUX4L3P0CJ86 424 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 DUX4L4P0CJ87 422 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 DUX4L5P0CJ88 424 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 DUX4L6P0CJ89 424 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 DUX4L7P0CJ90 424 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 PDGFRAP16234 1089 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 USP7Q93009 1102 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 MRPL40Q9NQ50 206 aaKnown RBP16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 DUX4Q9UBX2 424 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 TIMM13Q9Y5L4 95 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 VWA5AO00534 786 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 TMED10P49755 219 aaKnown RBP16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 DUOXA2Q1HG44 320 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 FNDC3BQ53EP0 1204 aaKnown RBP16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 RSBN1Q5VWQ0 802 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 C16orf46Q6P387 395 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 FAM171BQ6P995 826 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 RTL3Q8N8U3 475 aaKnown RBP16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 CCSER1Q9C0I3 900 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 TFR2Q9UP52 801 aa16.96■□□□□ 0.31
CACNA1A-238ENST00000637276 MCCD1P59942 119 aaPredicted RBP16.96■□□□□ 0.3
CACNA1A-238ENST00000637276 ABCE1P61221 599 aaKnown RBP16.96■□□□□ 0.3
CACNA1A-238ENST00000637276 GALNTL5Q7Z4T8 443 aa16.96■□□□□ 0.3
CACNA1A-238ENST00000637276 LRRC1Q9BTT6 524 aa16.96■□□□□ 0.3
CACNA1A-238ENST00000637276 MGAT4DA6NG13 374 aa16.95■□□□□ 0.3
CACNA1A-238ENST00000637276 CBX4O00257 560 aa16.95■□□□□ 0.3
CACNA1A-238ENST00000637276 PSMA3P25788 255 aa16.95■□□□□ 0.3
CACNA1A-238ENST00000637276 HUNKP57058 714 aa16.95■□□□□ 0.3
CACNA1A-238ENST00000637276 FAM71DQ8N9W8 422 aa16.95■□□□□ 0.3
CACNA1A-238ENST00000637276 KLRC2P26717 231 aa16.95■□□□□ 0.3
CACNA1A-238ENST00000637276 FGD3Q5JSP0 725 aa16.95■□□□□ 0.3
CACNA1A-238ENST00000637276 MIEF1Q9NQG6 463 aa16.95■□□□□ 0.3
CACNA1A-238ENST00000637276 TRIM64A6NGJ6 449 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms