RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 HS6ST3Q8IZP7 471 aa21.56■■□□□ 1.04
PTCD3-220ENST00000627371 SLC2A14Q8TDB8 520 aa21.56■■□□□ 1.04
PTCD3-220ENST00000627371 GPR152Q8TDT2 470 aa21.56■■□□□ 1.04
PTCD3-220ENST00000627371 GIPC2Q8TF65 315 aa21.56■■□□□ 1.04
PTCD3-220ENST00000627371 RPGRIP1Q96KN7 1286 aa21.56■■□□□ 1.04
PTCD3-220ENST00000627371 CEP295NLQ96MC4 621 aa21.56■■□□□ 1.04
PTCD3-220ENST00000627371 LRRC3Q9BY71 257 aa21.56■■□□□ 1.04
PTCD3-220ENST00000627371 SIX2Q9NPC8 291 aa21.56■■□□□ 1.04
PTCD3-220ENST00000627371 ANAPC1Q9H1A4 1944 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 LGALS16A8MUM7 142 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 SP100P23497 879 aaPredicted RBP21.55■■□□□ 1.04
PTCD3-220ENST00000627371 ANXA13P27216 316 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 CACNA2D1P54289 1103 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 APBA1Q02410 837 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 CYP4A22Q5TCH4 519 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 DPY19L2P1Q6NXN4 242 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 GJB7Q6PEY0 223 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 TMEM270Q6UE05 265 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 LRSAM1Q6UWE0 723 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 OTOP3Q7RTS5 596 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 LUZP1Q86V48 1076 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 TDRD5Q8NAT2 981 aaKnown RBP21.55■■□□□ 1.04
PTCD3-220ENST00000627371 ITFG1Q8TB96 612 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 CYFIP2Q96F07 1278 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 SPATA17Q96L03 361 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 C8orf48Q96LL4 319 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 HEXIM2Q96MH2 286 aaKnown RBP21.55■■□□□ 1.04
PTCD3-220ENST00000627371 NECAB3Q96P71 396 aaPredicted RBP21.55■■□□□ 1.04
PTCD3-220ENST00000627371 UHRF1Q96T88 793 aaPredicted RBP21.55■■□□□ 1.04
PTCD3-220ENST00000627371 HNRNPABQ99729 332 aaKnown RBP21.55■■□□□ 1.04
PTCD3-220ENST00000627371 KRT82Q9NSB4 513 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 TMEM30AQ9NV96 361 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.55■■□□□ 1.04
PTCD3-220ENST00000627371 MRPS23Q9Y3D9 190 aaKnown RBP21.55■■□□□ 1.04
PTCD3-220ENST00000627371 PCDHB4Q9Y5E5 795 aa21.55■■□□□ 1.04
PTCD3-220ENST00000627371 MYO10Q9HD67 2058 aa21.54■■□□□ 1.04
PTCD3-220ENST00000627371 MYO16Q9Y6X6 1858 aa21.54■■□□□ 1.04
PTCD3-220ENST00000627371 C2CD4DB7Z1M9 353 aa21.54■■□□□ 1.04
PTCD3-220ENST00000627371 F8VP50 259 aa21.54■■□□□ 1.04
PTCD3-220ENST00000627371 ZNF197O14709 1029 aa21.54■■□□□ 1.04
PTCD3-220ENST00000627371 CSH1P0DML2 217 aa21.54■■□□□ 1.04
PTCD3-220ENST00000627371 CSH2P0DML3 217 aa21.54■■□□□ 1.04
PTCD3-220ENST00000627371 MFAP3P55082 362 aa21.54■■□□□ 1.04
PTCD3-220ENST00000627371 TAF12Q16514 161 aa21.54■■□□□ 1.04
PTCD3-220ENST00000627371 PPP1R26Q5T8A7 1209 aaPredicted RBP21.54■■□□□ 1.04
PTCD3-220ENST00000627371 STKLD1Q8NE28 680 aa21.54■■□□□ 1.04
PTCD3-220ENST00000627371 ACSF2Q96CM8 615 aaPredicted RBP21.54■■□□□ 1.04
PTCD3-220ENST00000627371 ZNF334Q9HCZ1 680 aaPredicted RBP21.54■■□□□ 1.04
PTCD3-220ENST00000627371 DMAP1Q9NPF5 467 aaPredicted RBP21.54■■□□□ 1.04
PTCD3-220ENST00000627371 CNTN6Q9UQ52 1028 aa21.54■■□□□ 1.04
PTCD3-220ENST00000627371 MUC3AQ02505 3323 aa21.54■■□□□ 1.04
PTCD3-220ENST00000627371 SLC38A8A6NNN8 435 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 AP1G2O75843 785 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 NOL4O94818 638 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 MICAL2O94851 1124 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 FGF19O95750 216 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 PAEPP09466 180 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 MYL4P12829 197 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 HMGA1P17096 107 aaKnown RBP21.53■■□□□ 1.04
PTCD3-220ENST00000627371 ADORA2BP29275 332 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 CCR2P41597 374 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 ZNF132P52740 706 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 TPM4P67936 248 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 ARHGAP17Q68EM7 881 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 SMYD5Q6GMV2 418 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 RBBP8NLQ8NC74 664 aaPredicted RBP21.53■■□□□ 1.04
PTCD3-220ENST00000627371 TRMT2BQ96GJ1 504 aaKnown RBP21.53■■□□□ 1.04
PTCD3-220ENST00000627371 MYADMQ96S97 322 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 LSM14BQ9BX40 385 aaKnown RBP21.53■■□□□ 1.04
PTCD3-220ENST00000627371 TSPY26PQ9H489 355 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 CSNK1G1Q9HCP0 422 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 NUP210Q8TEM1 1887 aaPredicted RBP21.53■■□□□ 1.04
PTCD3-220ENST00000627371 TTC28Q96AY4 2481 aa21.53■■□□□ 1.04
PTCD3-220ENST00000627371 RNF225M0QZC1 329 aaPredicted RBP21.52■■□□□ 1.04
PTCD3-220ENST00000627371 FAM200BP0CF97 657 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 GBP2P32456 591 aaPredicted RBP21.52■■□□□ 1.04
PTCD3-220ENST00000627371 MTMR3Q13615 1198 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 SGO2Q562F6 1265 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 DENND5BQ6ZUT9 1274 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 NPAS3Q8IXF0 933 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 ZDHHC14Q8IZN3 488 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 GJD3Q8N144 294 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 PLCD3Q8N3E9 789 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 FGF13Q92913 245 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 TCEAL4Q96EI5 215 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 MYRFLQ96LU7 910 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 KCNK16Q96T55 309 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 SMOQ99835 787 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 IL21Q9HBE4 155 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 PLCB1Q9NQ66 1216 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 EPS15L1Q9UBC2 864 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 UXTQ9UBK9 157 aaPredicted RBP21.52■■□□□ 1.04
PTCD3-220ENST00000627371 AJAP1Q9UKB5 411 aaPredicted RBP21.52■■□□□ 1.04
PTCD3-220ENST00000627371 CDH7Q9ULB5 785 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 KIAA1257Q9ULG3 409 aa21.52■■□□□ 1.04
PTCD3-220ENST00000627371 ZFP37Q9Y6Q3 630 aaPredicted RBP21.52■■□□□ 1.04
PTCD3-220ENST00000627371 GOLGA6L19H0YKK7 550 aa21.51■■□□□ 1.03
PTCD3-220ENST00000627371 NRG2O14511 850 aaPredicted RBP21.51■■□□□ 1.03
PTCD3-220ENST00000627371 MOSPD3O75425 235 aa21.51■■□□□ 1.03
PTCD3-220ENST00000627371 VDRP11473 427 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms