RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SNRNP35Q16560 246 aaKnown RBP19.02■□□□□ 0.64
SSBP1-215ENST00000612337 FAM26FQ5R3K3 315 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 PKN3Q6P5Z2 889 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 SHC4Q6S5L8 630 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 VSTM1Q6UX27 236 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 TRAPPC11Q7Z392 1133 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.02■□□□□ 0.64
SSBP1-215ENST00000612337 FSIP1Q8NA03 581 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 MYLPFQ96A32 169 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 SPATA17Q96L03 361 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 C7orf25Q9BPX7 421 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 RTKNQ9BST9 563 aa19.02■□□□□ 0.64
SSBP1-215ENST00000612337 UBE4BO95155 1302 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 TGFB1I1O43294 461 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 ATG13O75143 517 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 DRD1P21728 446 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 HOXC13P31276 330 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 PSMC1P62191 440 aaKnown RBP19.01■□□□□ 0.63
SSBP1-215ENST00000612337 SNRPFP62306 86 aaKnown RBP19.01■□□□□ 0.63
SSBP1-215ENST00000612337 USP4Q13107 963 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 MAPRE1Q15691 268 aaKnown RBP19.01■□□□□ 0.63
SSBP1-215ENST00000612337 CEP68Q76N32 757 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 CPA6Q8N4T0 437 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 OSCP1Q8WVF1 389 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 CEP295NLQ96MC4 621 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 SLC22A12Q96S37 553 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 CYP2S1Q96SQ9 504 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 MAGEF1Q9HAY2 307 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 CRTAC1Q9NQ79 661 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 AGPAT3Q9NRZ7 376 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 DUS2Q9NX74 493 aaKnown RBP19.01■□□□□ 0.63
SSBP1-215ENST00000612337 GCNT4Q9P109 453 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.01■□□□□ 0.63
SSBP1-215ENST00000612337 PTPRDP23468 1912 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 RALGAPA1Q6GYQ0 2036 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 ATG2BQ96BY7 2078 aa19.01■□□□□ 0.63
SSBP1-215ENST00000612337 CCDC163A0A0D9SF12 145 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 EGFP01133 1207 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 DLATP10515 647 aaKnown RBP19■□□□□ 0.63
SSBP1-215ENST00000612337 BDNFP23560 247 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 GJA4P35212 333 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 GALK1P51570 392 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 EHHADHQ08426 723 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 CSRP2Q16527 193 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 UNC13DQ70J99 1090 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 ARL14EPQ8N8R7 260 aaPredicted RBP19■□□□□ 0.63
SSBP1-215ENST00000612337 RDH13Q8NBN7 331 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 MYCBPAPQ8TBZ2 947 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 SCFD1Q8WVM8 642 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 EXOC4Q96A65 974 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 MMS19Q96T76 1030 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 ECT2Q9H8V3 914 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 FBRSL1Q9HCM7 1045 aaKnown RBP19■□□□□ 0.63
SSBP1-215ENST00000612337 SEMA4GQ9NTN9 838 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 SPAG17Q6Q759 2223 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 SDK1Q7Z5N4 2213 aa19■□□□□ 0.63
SSBP1-215ENST00000612337 C2orf78A6NCI8 922 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 CLIC2O15247 247 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 RNF40O75150 1001 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 TACC1O75410 805 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 PDGFRBP09619 1106 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 TCF3P15923 654 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 TNNI1P19237 187 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 GRIK1P39086 918 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 IFNAR2P48551 515 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 PDE6CP51160 858 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 CYP24A1Q07973 514 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 KCNB1Q14721 858 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 PSMD6Q15008 389 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 FBXO43Q4G163 708 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 DENND5BQ6ZUT9 1274 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 FAM160A2Q8N612 972 aaPredicted RBP18.99■□□□□ 0.63
SSBP1-215ENST00000612337 XXYLT1Q8NBI6 393 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 NETO1Q8TDF5 533 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 SH3RF2Q8TEC5 729 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 ATP2A3Q93084 1043 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 PCED1BQ96HM7 432 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 FNBP1Q96RU3 617 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 CGRRF1Q99675 332 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 P2RY13Q9BPV8 354 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 ARHGAP26Q9UNA1 814 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 SLC8A2Q9UPR5 921 aa18.99■□□□□ 0.63
SSBP1-215ENST00000612337 TRIM66O15016 1216 aa18.98■□□□□ 0.63
SSBP1-215ENST00000612337 POLR2DO15514 142 aaKnown RBP18.98■□□□□ 0.63
SSBP1-215ENST00000612337 CST3P01034 146 aaPredicted RBP18.98■□□□□ 0.63
SSBP1-215ENST00000612337 FAM163BP0C2L3 166 aa18.98■□□□□ 0.63
SSBP1-215ENST00000612337 PFKLP17858 780 aa18.98■□□□□ 0.63
SSBP1-215ENST00000612337 HDCP19113 662 aa18.98■□□□□ 0.63
SSBP1-215ENST00000612337 ANXA13P27216 316 aa18.98■□□□□ 0.63
SSBP1-215ENST00000612337 GNL1P36915 607 aaPredicted RBP18.98■□□□□ 0.63
SSBP1-215ENST00000612337 CYP2J2P51589 502 aa18.98■□□□□ 0.63
SSBP1-215ENST00000612337 CYP27A1Q02318 531 aa18.98■□□□□ 0.63
SSBP1-215ENST00000612337 EML3Q32P44 896 aa18.98■□□□□ 0.63
SSBP1-215ENST00000612337 PRR23CQ6ZRP0 262 aa18.98■□□□□ 0.63
SSBP1-215ENST00000612337 HS2ST1Q7LGA3 356 aa18.98■□□□□ 0.63
SSBP1-215ENST00000612337 NELFCDQ8IXH7 590 aa18.98■□□□□ 0.63
SSBP1-215ENST00000612337 CAMKK1Q8N5S9 505 aa18.98■□□□□ 0.63
SSBP1-215ENST00000612337 TTC16Q8NEE8 873 aa18.98■□□□□ 0.63
SSBP1-215ENST00000612337 GAB3Q8WWW8 586 aa18.98■□□□□ 0.63
SSBP1-215ENST00000612337 SNX21Q969T3 373 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms