RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 C11orf84Q9BUA3 381 aaPredicted RBP19.64■□□□□ 0.73
SSBP4-212ENST00000601919 ABCB6Q9NP58 842 aa19.64■□□□□ 0.73
SSBP4-212ENST00000601919 KRT82Q9NSB4 513 aa19.64■□□□□ 0.73
SSBP4-212ENST00000601919 PCDHB5Q9Y5E4 795 aa19.64■□□□□ 0.73
SSBP4-212ENST00000601919 PTPRDP23468 1912 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 A0A0A6YYK5 440 aaPredicted RBP19.63■□□□□ 0.73
SSBP4-212ENST00000601919 C5orf67F2Z3F1 127 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 PDE4CQ08493 712 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 GPR17Q13304 367 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 CFAP221Q4G0U5 840 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 SLC8B1Q6J4K2 584 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 PRSS55Q6UWB4 352 aaPredicted RBP19.63■□□□□ 0.73
SSBP4-212ENST00000601919 MMS22LQ6ZRQ5 1243 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 LRRTM3Q86VH5 581 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 RHOT2Q8IXI1 618 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 WDTC1Q8N5D0 677 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 RNF10Q8N5U6 811 aaKnown RBP19.63■□□□□ 0.73
SSBP4-212ENST00000601919 FBXO22Q8NEZ5 403 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 SLC35F5Q8WV83 523 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 C18orf8Q96DM3 657 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 HSFY1Q96LI6 401 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 TGS1Q96RS0 853 aaKnown RBP19.63■□□□□ 0.73
SSBP4-212ENST00000601919 TMEM209Q96SK2 561 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 C11orf70Q9BRQ4 267 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 PACSIN1Q9BY11 444 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 UBXN6Q9BZV1 441 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 LACRTQ9GZZ8 138 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 THAP2Q9H0W7 228 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 AVENQ9NQS1 362 aaPredicted RBP19.63■□□□□ 0.73
SSBP4-212ENST00000601919 ST7Q9NRC1 585 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 WDR35Q9P2L0 1181 aa19.63■□□□□ 0.73
SSBP4-212ENST00000601919 NCANO14594 1321 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 RCCD1A6NED2 376 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 USP27XA6NNY8 438 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 GRXCR1A8MXD5 290 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 CLDN5O00501 218 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 C2CD2LO14523 706 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 CA3P07451 260 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 CTSAP10619 480 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 PLA2G4AP47712 749 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 ARPP19P56211 112 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 VSTM1Q6UX27 236 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 PAQR9Q6ZVX9 377 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 C17orf53Q8N3J3 647 aaPredicted RBP19.62■□□□□ 0.73
SSBP4-212ENST00000601919 SPPL2BQ8TCT7 592 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 RFFLQ8WZ73 363 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 ZBP1Q9H171 429 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 MRPL47Q9HD33 250 aaKnown RBP19.62■□□□□ 0.73
SSBP4-212ENST00000601919 DMAP1Q9NPF5 467 aaPredicted RBP19.62■□□□□ 0.73
SSBP4-212ENST00000601919 TMLHEQ9NVH6 421 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 UVRAGQ9P2Y5 699 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 CNOT8Q9UFF9 292 aaKnown RBP19.62■□□□□ 0.73
SSBP4-212ENST00000601919 GUCA1BQ9UMX6 200 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 CDY1Q9Y6F8 540 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 SCINQ9Y6U3 715 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 PLXNA4Q9HCM2 1894 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 CEP290O15078 2479 aa19.62■□□□□ 0.73
SSBP4-212ENST00000601919 KIF5CO60282 957 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 CYP1A2P05177 515 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 OR4Q2P0C623 313 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 MYOGP15173 224 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 BDNFP23560 247 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 ARHGAP25P42331 645 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 NOP2P46087 812 aaKnown RBP19.61■□□□□ 0.73
SSBP4-212ENST00000601919 GABRB2P47870 512 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 NAP1L1P55209 391 aaKnown RBP19.61■□□□□ 0.73
SSBP4-212ENST00000601919 PTPN20Q4JDL3 420 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 FAM109BQ6ICB4 259 aaPredicted RBP19.61■□□□□ 0.73
SSBP4-212ENST00000601919 CLEC20AQ6ZU45 233 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 ZDHHC17Q8IUH5 632 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 TDHQ8IZJ6 230 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 KCTD13Q8WZ19 329 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 CPXM1Q96SM3 734 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 SLC4A5Q9BY07 1137 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 PNPLA8Q9NP80 782 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 PARVAQ9NVD7 372 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 ABI2Q9NYB9 513 aaPredicted RBP19.61■□□□□ 0.73
SSBP4-212ENST00000601919 FNIP2Q9P278 1114 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 MYO1AQ9UBC5 1043 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 MAFFQ9ULX9 164 aa19.61■□□□□ 0.73
SSBP4-212ENST00000601919 KIF2AO00139 706 aaPredicted RBP19.6■□□□□ 0.73
SSBP4-212ENST00000601919 TRIM66O15016 1216 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 ZNF500O60304 480 aaPredicted RBP19.6■□□□□ 0.73
SSBP4-212ENST00000601919 LPXNO60711 386 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 TUBB4AP04350 444 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 OR1D2P34982 312 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 MAGEA11P43364 429 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 GSCP56915 257 aaPredicted RBP19.6■□□□□ 0.73
SSBP4-212ENST00000601919 MAP3K7CLP57077 242 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 ERVK-21P61565 698 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 TAP1Q03518 808 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 ZNF268Q14587 947 aaPredicted RBP19.6■□□□□ 0.73
SSBP4-212ENST00000601919 TCEAL1Q15170 157 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 CCDC142Q17RM4 750 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 TPGS2Q68CL5 300 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 PMF1Q6P1K2 205 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 TMC7Q7Z402 723 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 TMEM110Q86TL2 294 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 DNAAF5Q86Y56 855 aa19.6■□□□□ 0.73
SSBP4-212ENST00000601919 C17orf80Q9BSJ5 609 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms