RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 CCDC130P13994 396 aa18.09■□□□□ 0.49
RPRD1A-209ENST00000590898 BDNFP23560 247 aa18.09■□□□□ 0.49
RPRD1A-209ENST00000590898 HOXA9P31269 272 aa18.09■□□□□ 0.49
RPRD1A-209ENST00000590898 GTF2F1P35269 517 aaKnown RBP eCLIP18.09■□□□□ 0.49
RPRD1A-209ENST00000590898 LIN9Q5TKA1 542 aa18.09■□□□□ 0.49
RPRD1A-209ENST00000590898 SPATA31D4Q6ZUB0 917 aa18.09■□□□□ 0.49
RPRD1A-209ENST00000590898 SLC47A2Q86VL8 602 aa18.09■□□□□ 0.49
RPRD1A-209ENST00000590898 ZNF677Q86XU0 584 aa18.09■□□□□ 0.49
RPRD1A-209ENST00000590898 ANKRD52Q8NB46 1076 aa18.09■□□□□ 0.49
RPRD1A-209ENST00000590898 TFAP2BQ92481 460 aa18.09■□□□□ 0.49
RPRD1A-209ENST00000590898 CRISPLD1Q9H336 500 aa18.09■□□□□ 0.49
RPRD1A-209ENST00000590898 MAN1C1Q9NR34 630 aa18.09■□□□□ 0.49
RPRD1A-209ENST00000590898 DZANK1Q9NVP4 752 aa18.09■□□□□ 0.49
RPRD1A-209ENST00000590898 EYSQ5T1H1 3165 aa18.09■□□□□ 0.49
RPRD1A-209ENST00000590898 LRRC53A6NM62 1247 aa18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 AKR1B15C9JRZ8 316 aaPredicted RBP18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 MFAP3LO75121 409 aa18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 GFPT2O94808 682 aa18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 CYP11B1P15538 503 aa18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 CYP2F1P24903 491 aa18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 SFMBT2Q5VUG0 894 aa18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 IRF2BP2Q7Z5L9 587 aa18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 FAM35AQ86V20 835 aa18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 PABPC5Q96DU9 382 aaKnown RBP18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 MED10Q9BTT4 135 aa18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 DUSP16Q9BY84 665 aa18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 CSNK1G1Q9HCP0 422 aa18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 ZDHHC7Q9NXF8 308 aa18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 SLC27A5Q9Y2P5 690 aa18.08■□□□□ 0.49
RPRD1A-209ENST00000590898 GREB1Q4ZG55 1949 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 CLDN5O00501 218 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 ZMYND10O75800 440 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 C8AP07357 584 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 HNRNPA1P09651 372 aaKnown RBP eCLIP18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 HOXB8P17481 243 aaPredicted RBP18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 KRT9P35527 623 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 ALDH1A3P47895 512 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 RPL10AP62906 217 aaKnown RBP18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 PLD1Q13393 1074 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 MGAT5BQ3V5L5 792 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 VN1R2Q8NFZ6 395 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 ZSWIM1Q9BR11 485 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 UBXN6Q9BZV1 441 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 ZNF518BQ9C0D4 1074 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 ACP6Q9NPH0 428 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 SPTLC3Q9NUV7 552 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 HESX1Q9UBX0 185 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 TSPAN16Q9UKR8 245 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 PCDHGC3Q9UN70 934 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 INSL5Q9Y5Q6 135 aa18.08■□□□□ 0.48
RPRD1A-209ENST00000590898 TRIM66O15016 1216 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 THAP12O43422 761 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 GLP2RO95838 553 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 POU2F2P09086 479 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 FAM200BP0CF97 657 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 BRD2P25440 801 aaKnown RBP18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 HNRNPH3P31942 346 aaKnown RBP18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 PRKCIP41743 596 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 PDE6CP51160 858 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 SLC8A3P57103 927 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 CNGA4Q8IV77 575 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 CMASQ8NFW8 434 aaPredicted RBP18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 OR8K1Q8NGG5 319 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 SLC7A14Q8TBB6 771 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 EPS8L1Q8TE68 723 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 DDX1Q92499 740 aaKnown RBP18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 C8orf48Q96LL4 319 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 RHOBTB2Q9BYZ6 727 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 DOCK6Q96HP0 2047 aa18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 ZNF638Q14966 1978 aaKnown RBP18.07■□□□□ 0.48
RPRD1A-209ENST00000590898 PRUNE2Q8WUY3 3088 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 NPR3P17342 541 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 GRIK1P39086 918 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 PKDCCQ504Y2 493 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 PPM1LQ5SGD2 360 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 LLGL2Q6P1M3 1020 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 CYP26C1Q6V0L0 522 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 MICALL1Q8N3F8 863 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 SPATA17Q96L03 361 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 BAG1Q99933 345 aaPredicted RBP18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 PNPLA8Q9NP80 782 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 DMAP1Q9NPF5 467 aaPredicted RBP18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 ASB3Q9Y575 518 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 BZW2Q9Y6E2 419 aaKnown RBP18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 AP1G2O75843 785 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 ADORA2BP29275 332 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 BCAT1P54687 386 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 TSR1Q2NL82 804 aaKnown RBP18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 E4F1Q66K89 784 aaPredicted RBP18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 CLEC20AQ6ZU45 233 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 TTC9BQ8N6N2 239 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 DNAJC7Q99615 494 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 SEPT5Q99719 369 aaPredicted RBP18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 LHX5Q9H2C1 402 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 SFXN1Q9H9B4 322 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 KRT82Q9NSB4 513 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 YIPF1Q9Y548 306 aa18.06■□□□□ 0.48
RPRD1A-209ENST00000590898 LINC01565O15544 149 aa18.05■□□□□ 0.48
RPRD1A-209ENST00000590898 LRG1P02750 347 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms