RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 DCAF16Q9NXF7 216 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 ADAM22Q9P0K1 906 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 HSFX1Q9UBD0 423 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 RASAL2Q9UJF2 1139 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 SCAF8Q9UPN6 1271 aaKnown RBP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 TMA7Q9Y2S6 64 aaKnown RBP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 ZNF711Q9Y462 761 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 SNX9Q9Y5X1 595 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 OVOS2A0A0G2JMS6 1433 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 OVOS2A0A0J9YW53 1432 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 BCL9O00512 1426 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 PTCH1Q13635 1447 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 OVOS2Q6IE36 1432 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 PRAG1Q86YV5 1406 aa6.48□□□□□ -1.37
SMAD4-203ENST00000585448 PDS5AQ29RF7 1337 aaKnown RBP6.48□□□□□ -1.37
SMAD4-203ENST00000585448 MYO5CQ9NQX4 1742 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 PNPLA6Q8IY17 1366 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 ABCC3O15438 1527 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 AKR1B15C9JRZ8 316 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 SNX2O60749 519 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 PDE5AO76074 875 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 FBXO21O94952 628 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 TJP3O95049 919 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 RASGRP1O95267 797 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 GNA14O95837 355 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 PDHA1P08559 390 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 PABPC4LP0CB38 370 aaKnown RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 PI3P19957 117 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 DRD4P21917 467 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 KCNA3P22001 575 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 CFPP27918 469 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 GJA4P35212 333 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 SERPINB6P35237 376 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 ALDH5A1P51649 535 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 NKX3-2P78367 333 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 JAG1P78504 1218 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 OCRLQ01968 901 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 CEBPZQ03701 1054 aaKnown RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 DPYSQ14117 519 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 E2F2Q14209 437 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 R3HDM1Q15032 1099 aaKnown RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 CRY1Q16526 586 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 PARP6Q2NL67 630 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 WDR45BQ5MNZ6 344 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 ZNF362Q5T0B9 420 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 MEX3CQ5U5Q3 659 aaKnown RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 PAPD7Q5XG87 772 aaKnown RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 DUS1LQ6P1R4 473 aaKnown RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 TUBA3EQ6PEY2 450 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 TTC23LQ6PF05 361 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 Q6ZNX1 250 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 TOGARAM2Q6ZUX3 1019 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 TAOK1Q7L7X3 1001 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 ZNF572Q7Z3I7 529 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 IQCKQ8N0W5 287 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 SLC35F6Q8N357 371 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 ZNF713Q8N859 430 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 EIF1ADQ8N9N8 165 aaKnown RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 LILRB1Q8NHL6 650 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 ZSCAN18Q8TBC5 510 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 FNDC8Q8TC99 324 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 FNIP1Q8TF40 1166 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 STARD8Q92502 1023 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 CDKL2Q92772 493 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 NINJ1Q92982 152 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 SDCCAG3Q96C92 435 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 NSMCE3Q96MG7 304 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 CDC5LQ99459 802 aaKnown RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 KCNJ15Q99712 375 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 UQCC2Q9BRT2 126 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 KLHL4Q9C0H6 718 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 BCAS3Q9H6U6 928 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 PPANQ9NQ55 473 aaKnown RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 ARHGEF3Q9NR81 526 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 TYW1Q9NV66 732 aaKnown RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 CRNNQ9UBG3 495 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 CFDP1Q9UEE9 299 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 SEC63Q9UGP8 760 aaKnown RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 RCOR1Q9UKL0 485 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 ACAD8Q9UKU7 415 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 CBLCQ9ULV8 474 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 HBS1LQ9Y450 684 aaKnown RBP6.47□□□□□ -1.37
SMAD4-203ENST00000585448 AFF2P51816 1311 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 AOX1Q06278 1338 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 ITIH6Q6UXX5 1313 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 SYNJ2O15056 1496 aa6.47□□□□□ -1.37
SMAD4-203ENST00000585448 KIAA0586Q9BVV6 1533 aa6.46□□□□□ -1.37
SMAD4-203ENST00000585448 IQANK1A0A1B0GTG1 560 aa6.46□□□□□ -1.38
SMAD4-203ENST00000585448 LINC00854A0A1B0GVQ3 168 aa6.46□□□□□ -1.38
SMAD4-203ENST00000585448 ANO9A1A5B4 782 aa6.46□□□□□ -1.38
SMAD4-203ENST00000585448 SH3D21A4FU49 640 aa6.46□□□□□ -1.38
SMAD4-203ENST00000585448 E9PBE3 544 aa6.46□□□□□ -1.38
SMAD4-203ENST00000585448 PSMD14O00487 310 aa6.46□□□□□ -1.38
SMAD4-203ENST00000585448 NVLO15381 856 aaKnown RBP6.46□□□□□ -1.38
SMAD4-203ENST00000585448 B3GALNT1O75752 331 aa6.46□□□□□ -1.38
SMAD4-203ENST00000585448 GLRX3O76003 335 aaKnown RBP6.46□□□□□ -1.38
SMAD4-203ENST00000585448 LRG1P02750 347 aa6.46□□□□□ -1.38
SMAD4-203ENST00000585448 AMY2AP04746 511 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms