RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 ZBTB45Q96K62 511 aaPredicted RBP10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 SNX27Q96L92 541 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 ZMAT2Q96NC0 199 aaKnown RBP10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 TSPAN18Q96SJ8 248 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 REEP2Q9BRK0 252 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 PIDD1Q9HB75 910 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 PARVGQ9HBI0 331 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 NDFIP2Q9NV92 336 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 TBX20Q9UMR3 447 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 BACE2Q9Y5Z0 518 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 TRIP11Q15643 1979 aa10.68□□□□□ -0.7
HNRNPC-228ENST00000557033 CCDC163A0A0D9SF12 145 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 BNIP3LO60238 219 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 RFPL2O75678 378 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 PIGRP01833 764 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 KRT18P05783 430 aaKnown RBP10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 CLTAP09496 248 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 HNRNPA1P09651 372 aaKnown RBP eCLIP10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 RPL17P18621 184 aaKnown RBP10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 PRR20EP86478 221 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 PRR20CP86479 221 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 PRR20DP86480 221 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 PRR20BP86481 221 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 PRR20AP86496 221 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 DHX8Q14562 1220 aaKnown RBP10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 NCAPHQ15003 741 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 UVSSAQ2YD98 709 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 SLC10A6Q3KNW5 377 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 ADAMTSL4Q6UY14 1074 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 VN1R5Q7Z5H4 357 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 SUGP1Q8IWZ8 645 aaKnown RBP10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 RAVER1Q8IY67 606 aaKnown RBP10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 FBXL6Q8N531 539 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 LRRC15Q8TF66 581 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 SMG7Q92540 1137 aaKnown RBP10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 PMM1Q92871 262 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 SNX21Q969T3 373 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 ZNF707Q96C28 371 aaPredicted RBP10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 EPSTI1Q96J88 318 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 PRRX2Q99811 253 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 ST6GALNAC4Q9H4F1 302 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 IGSF9Q9P2J2 1179 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 ANKFY1Q9P2R3 1169 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 MTRRQ9UBK8 725 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 STK17AQ9UEE5 414 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 FBXO2Q9UK22 296 aaPredicted RBP10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 MTMR6Q9Y217 621 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 DENND4AQ7Z401 1863 aa10.67□□□□□ -0.7
HNRNPC-228ENST00000557033 PODXLO00592 558 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 SYN3O14994 580 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 STX6O43752 255 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 TBCAO75347 108 aaKnown RBP10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 HARSP12081 509 aaKnown RBP10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 PMLP29590 882 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 MARCKSP29966 332 aaPredicted RBP10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 HOXA9P31269 272 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 OR1D2P34982 312 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 MATR3P43243 847 aaKnown RBP eCLIP10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 LIG4P49917 911 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 GTF2BQ00403 316 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 SOX4Q06945 474 aaPredicted RBP10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 SLC39A14Q15043 492 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 LIN9Q5TKA1 542 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 RRAGBQ5VZM2 374 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 PDZD3Q86UT5 571 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 CD302Q8IX05 232 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 FEZF2Q8TBJ5 459 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 BICD1Q96G01 975 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 GOLGA2P5Q9HBQ8 144 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 EPS15L1Q9UBC2 864 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 FBXW11Q9UKB1 542 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 SOX13Q9UN79 622 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 NUB1Q9Y5A7 615 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 ZFP37Q9Y6Q3 630 aaPredicted RBP10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 C2orf16Q68DN1 1984 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 TRIOO75962 3097 aa10.66□□□□□ -0.7
HNRNPC-228ENST00000557033 MYO10Q9HD67 2058 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 CITO14578 2027 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 CLUHO75153 1309 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 A0A0B4J269 797 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 TTC26A0AVF1 554 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 ALG1L2C9J202 215 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 H7C4K7 107 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 K7ENM7 598 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 HNRNPDLO14979 420 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 OGTO15294 1046 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 MEFVO15553 781 aaPredicted RBP10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 XPOTO43592 962 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 SMNDC1O75940 238 aaKnown RBP eCLIP10.65□□□□□ -0.71e-6■□□□□ 8.2
HNRNPC-228ENST00000557033 GHRHP01286 108 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 ADRB2P07550 413 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 POU2F2P09086 479 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 MYBP10242 640 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 CYP3A5P20815 502 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 IGFBP6P24592 240 aaPredicted RBP10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 BRCC3P46736 316 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 NFKB2Q00653 900 aa10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 POU5F1Q01860 360 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-228ENST00000557033 CEBPZQ03701 1054 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms