RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 LONRF2Q1L5Z9 754 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 FAM183BPQ6ZVS7 135 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 RHOT1Q8IXI2 618 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 CRIPAKQ8N1N5 446 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 HASPINQ8TF76 798 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 KANSL3Q9P2N6 904 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 USTQ9Y2C2 406 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 ODC1P11926 461 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 TCF4P15884 667 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 CCL23P55773 120 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 VSNL1P62760 191 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 MRPS25P82663 173 aaKnown RBP20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 FAM102AQ5T9C2 384 aaPredicted RBP20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 WDR93Q6P2C0 686 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 OLFML1Q6UWY5 402 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 COLGALT2Q8IYK4 626 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 EMC1Q8N766 993 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 URGCPQ8TCY9 931 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 RSPH1Q8WYR4 309 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 KRT12Q99456 494 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 NAP1L3Q99457 506 aaPredicted RBP20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 RTP3Q9BQQ7 232 aa20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.61■□□□□ 0.89
RBFOX1-215ENST00000553186 TDRD15B5MCY1 1934 aaKnown RBP20.6■□□□□ 0.89
RBFOX1-215ENST00000553186 TET1Q8NFU7 2136 aa20.6■□□□□ 0.89
RBFOX1-215ENST00000553186 GJA8P48165 433 aa20.6■□□□□ 0.89
RBFOX1-215ENST00000553186 CC2D1AQ6P1N0 951 aaPredicted RBP20.6■□□□□ 0.89
RBFOX1-215ENST00000553186 SPATA18Q8TC71 538 aa20.6■□□□□ 0.89
RBFOX1-215ENST00000553186 SYT15Q9BQS2 421 aa20.6■□□□□ 0.89
RBFOX1-215ENST00000553186 PPP1R12CQ9BZL4 782 aa20.6■□□□□ 0.89
RBFOX1-215ENST00000553186 DMGDHQ9UI17 866 aaKnown RBP20.6■□□□□ 0.89
RBFOX1-215ENST00000553186 CCDC188H7C350 402 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 CLDN5O00501 218 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 PAPSS1O43252 624 aaPredicted RBP20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 TUBBP07437 444 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 PLA2G4AP47712 749 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 CLUL1Q15846 466 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 GLE1Q53GS7 698 aaKnown RBP20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 MDH1BQ5I0G3 518 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 SEL1L2Q5TEA6 688 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 OR6B2Q6IFH4 312 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 ZDHHC14Q8IZN3 488 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 ARFGAP1Q8N6T3 406 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 SUSD3Q96L08 255 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 DUSP16Q9BY84 665 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 TBX21Q9UL17 535 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 PARNO95453 639 aaKnown RBP20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 PSMA2P25787 234 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 CYP2C18P33260 490 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 PLCB3Q01970 1234 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 LRRC38Q5VT99 294 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 TRNP1Q6NT89 227 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 C8orf74Q6P047 294 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 SCUBE3Q8IX30 993 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 KATNAL2Q8IYT4 538 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 KHSRPQ92945 711 aaKnown RBP eCLIP20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 B3GNT5Q9BYG0 378 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 CYLDQ9NQC7 956 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 CDH9Q9ULB4 789 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 PCDHB7Q9Y5E2 793 aa20.59■□□□□ 0.89
RBFOX1-215ENST00000553186 MYBPHLA2RUH7 354 aa20.58■□□□□ 0.89
RBFOX1-215ENST00000553186 CCDC151A5D8V7 595 aa20.58■□□□□ 0.89
RBFOX1-215ENST00000553186 RRP9O43818 475 aaKnown RBP20.58■□□□□ 0.89
RBFOX1-215ENST00000553186 CAPN15O75808 1086 aa20.58■□□□□ 0.89
RBFOX1-215ENST00000553186 CCDC70Q6NSX1 233 aa20.58■□□□□ 0.89
RBFOX1-215ENST00000553186 ADAT2Q7Z6V5 191 aaKnown RBP20.58■□□□□ 0.89
RBFOX1-215ENST00000553186 SLC13A5Q86YT5 568 aaPredicted RBP20.58■□□□□ 0.89
RBFOX1-215ENST00000553186 KLHL7Q8IXQ5 586 aa20.58■□□□□ 0.89
RBFOX1-215ENST00000553186 HSFY1Q96LI6 401 aa20.58■□□□□ 0.89
RBFOX1-215ENST00000553186 ARGLU1Q9NWB6 273 aaPredicted RBP20.58■□□□□ 0.89
RBFOX1-215ENST00000553186 DSEQ9UL01 958 aa20.58■□□□□ 0.89
RBFOX1-215ENST00000553186 TMEM189-UBE2V1I3L0A0 370 aa20.58■□□□□ 0.88
RBFOX1-215ENST00000553186 XPO1O14980 1071 aaKnown RBP20.58■□□□□ 0.88
RBFOX1-215ENST00000553186 SART1O43290 800 aaKnown RBP20.58■□□□□ 0.88
RBFOX1-215ENST00000553186 PCSK1P29120 753 aa20.58■□□□□ 0.88
RBFOX1-215ENST00000553186 SLC7A5Q01650 507 aa20.58■□□□□ 0.88
RBFOX1-215ENST00000553186 BRD3Q15059 726 aa20.58■□□□□ 0.88
RBFOX1-215ENST00000553186 PCED1BQ96HM7 432 aa20.58■□□□□ 0.88
RBFOX1-215ENST00000553186 CASD1Q96PB1 797 aa20.58■□□□□ 0.88
RBFOX1-215ENST00000553186 DDX47Q9H0S4 455 aaKnown RBP20.58■□□□□ 0.88
RBFOX1-215ENST00000553186 DNAJB4Q9UDY4 337 aa20.58■□□□□ 0.88
RBFOX1-215ENST00000553186 TCRBV7S2A1N4TA0A589 114 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 C2CD4BA6NLJ0 364 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 LRCH4O75427 683 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 ZMYND10O75800 440 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 BEST1O76090 585 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 NPR3P17342 541 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 SSR1P43307 286 aaKnown RBP20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 SNX16P57768 344 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 SLC6A3Q01959 620 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 TAF5Q15542 800 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 TXNRD3NBQ6F5E7 133 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 PIGZQ86VD9 579 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 ZDHHC17Q8IUH5 632 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 MYCBPAPQ8TBZ2 947 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 ACBD6Q9BR61 282 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 PLVAPQ9BX97 442 aa20.57■□□□□ 0.88
RBFOX1-215ENST00000553186 FLT3P36888 993 aa20.56■□□□□ 0.88
RBFOX1-215ENST00000553186 GATMP50440 423 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms