RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 BFSP1Q12934 665 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 RUNX3Q13761 415 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 VEPH1Q14D04 833 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 ELF2Q15723 593 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 CNNM4Q6P4Q7 775 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 TMEM150AQ86TG1 271 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 DCP1BQ8IZD4 617 aaKnown RBP12.73□□□□□ -0.37
GABPB1-206ENST00000543881 ZNF507Q8TCN5 953 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 CHFRQ96EP1 664 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 GCNAQ96QF7 691 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 PKMYT1Q99640 499 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 C7orf25Q9BPX7 421 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 FAM83CQ9BQN1 747 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 PI4K2AQ9BTU6 479 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 SLC46A2Q9BY10 475 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 CUEDC2Q9H467 287 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 EBF3Q9H4W6 596 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 HPS4Q9NQG7 708 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 GDAP2Q9NXN4 497 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 ITGA11Q9UKX5 1188 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 WASF3Q9UPY6 502 aa12.73□□□□□ -0.37
GABPB1-206ENST00000543881 DCLK1O15075 740 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 POLR2DO15514 142 aaKnown RBP12.72□□□□□ -0.37
GABPB1-206ENST00000543881 CAVIN2O95810 425 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 F13A1P00488 732 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 EGFP01133 1207 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 KRT19P08727 400 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 ASIC1P78348 528 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 RBP5P82980 135 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 EHHADHQ08426 723 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 SOWAHAQ2M3V2 549 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 SH3PXD2AQ5TCZ1 1133 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 SDHAF4Q5VUM1 108 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 DAB2IPQ5VWQ8 1189 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 TRIM68Q6AZZ1 485 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 CMTM8Q8IZV2 173 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 IQUBQ8NA54 791 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 ACBD6Q9BR61 282 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 LRRC27Q9C0I9 530 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 FBRSL1Q9HCM7 1045 aaKnown RBP12.72□□□□□ -0.37
GABPB1-206ENST00000543881 INTS13Q9NVM9 706 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 DDX43Q9NXZ2 648 aaKnown RBP12.72□□□□□ -0.37
GABPB1-206ENST00000543881 HSPBP1Q9NZL4 362 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 GTF3C4Q9UKN8 822 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 PCDHA7Q9UN72 937 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 PCDHB5Q9Y5E4 795 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 SNX9Q9Y5X1 595 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 ZNF638Q14966 1978 aaKnown RBP12.72□□□□□ -0.37
GABPB1-206ENST00000543881 ZZEF1O43149 2961 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 DENND4CQ5VZ89 1909 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 LNP1A1A4G5 178 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 BCLAF3A2AJT9 711 aaKnown RBP12.72□□□□□ -0.37
GABPB1-206ENST00000543881 ZNF233A6NK53 670 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 GABRDO14764 452 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 KIAA0391O15091 583 aaKnown RBP12.72□□□□□ -0.37
GABPB1-206ENST00000543881 EIF3DO15371 548 aaKnown RBP eCLIP12.72□□□□□ -0.37
GABPB1-206ENST00000543881 HUS1O60921 280 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 F11P03951 625 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 TMEM191BP0C7N4 346 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 CYP2F1P24903 491 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 AMPD3Q01432 767 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 AMPD2Q01433 879 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 TSPY1Q01534 308 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 TAF12Q16514 161 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 DDR2Q16832 855 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 INTS6LQ5JSJ4 861 aaKnown RBP12.72□□□□□ -0.37
GABPB1-206ENST00000543881 FAM26FQ5R3K3 315 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 STXBP4Q6ZWJ1 553 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 LIMS2Q7Z4I7 341 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 HSCBQ8IWL3 235 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 TMEM86AQ8N2M4 240 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 LEO1Q8WVC0 666 aaPredicted RBP12.72□□□□□ -0.37
GABPB1-206ENST00000543881 SCFD1Q8WVM8 642 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 TMEM121BQ9BXQ6 578 aaPredicted RBP12.72□□□□□ -0.37
GABPB1-206ENST00000543881 ADAM33Q9BZ11 813 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 BLZF1Q9H2G9 400 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 AGPAT3Q9NRZ7 376 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 CCL26Q9Y258 94 aa12.72□□□□□ -0.37
GABPB1-206ENST00000543881 SPEGQ15772 3267 aa12.71□□□□□ -0.37
GABPB1-206ENST00000543881 NUP205Q92621 2012 aa12.71□□□□□ -0.37
GABPB1-206ENST00000543881 ASPMQ8IZT6 3477 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 TMEM8BA6NDV4 472 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 ATP2C2O75185 946 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 PRPF40AO75400 957 aaKnown RBP12.71□□□□□ -0.38
GABPB1-206ENST00000543881 TOP3BO95985 862 aaKnown RBP12.71□□□□□ -0.38
GABPB1-206ENST00000543881 ARSAP15289 507 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 DRD1P21728 446 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 AVPR1AP37288 418 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 GALK1P51570 392 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 NLRP12P59046 1061 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 ACAP1Q15027 740 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 NFE2Q16621 373 aaPredicted RBP12.71□□□□□ -0.38
GABPB1-206ENST00000543881 FBXO43Q4G163 708 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 UNC13DQ70J99 1090 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 NELFCDQ8IXH7 590 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 ADGRF2Q8IZF7 708 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 TOP6BLQ8N6T0 577 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 RDH13Q8NBN7 331 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 SPRYD3Q8NCJ5 442 aa12.71□□□□□ -0.38
GABPB1-206ENST00000543881 RPLP0P6Q8NHW5 317 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms