RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 AFG1LQ8WV93 481 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 ZNF570Q96NI8 536 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 ADARB2Q9NS39 739 aaKnown RBP15.53■□□□□ 0.08
DDX55-209ENST00000542286 HES2Q9Y543 173 aa15.53■□□□□ 0.08
DDX55-209ENST00000542286 M0QYV0 167 aa15.52■□□□□ 0.08
DDX55-209ENST00000542286 PPEF2O14830 753 aa15.52■□□□□ 0.08
DDX55-209ENST00000542286 LGR5O75473 907 aa15.52■□□□□ 0.08
DDX55-209ENST00000542286 C22orf31O95567 290 aa15.52■□□□□ 0.08
DDX55-209ENST00000542286 AMHR2Q16671 573 aa15.52■□□□□ 0.08
DDX55-209ENST00000542286 MSS51Q4VC12 460 aa15.52■□□□□ 0.08
DDX55-209ENST00000542286 EAPPQ56P03 285 aaPredicted RBP15.52■□□□□ 0.08
DDX55-209ENST00000542286 FAM47EQ6ZV65 393 aa15.52■□□□□ 0.08
DDX55-209ENST00000542286 ARMCX2Q7L311 632 aa15.52■□□□□ 0.08
DDX55-209ENST00000542286 RCOR2Q8IZ40 523 aa15.52■□□□□ 0.08
DDX55-209ENST00000542286 L3MBTL3Q96JM7 780 aaPredicted RBP15.52■□□□□ 0.08
DDX55-209ENST00000542286 VPS37BQ9H9H4 285 aa15.52■□□□□ 0.08
DDX55-209ENST00000542286 ANK1P16157 1881 aa15.52■□□□□ 0.07
DDX55-209ENST00000542286 ENO4A6NNW6 628 aa15.52■□□□□ 0.07
DDX55-209ENST00000542286 DIAPH2O60879 1101 aa15.52■□□□□ 0.07
DDX55-209ENST00000542286 ARF4P18085 180 aaPredicted RBP15.52■□□□□ 0.07
DDX55-209ENST00000542286 CYP3A5P20815 502 aa15.52■□□□□ 0.07
DDX55-209ENST00000542286 GCAP28676 217 aa15.52■□□□□ 0.07
DDX55-209ENST00000542286 NUGGCQ68CJ6 796 aa15.52■□□□□ 0.07
DDX55-209ENST00000542286 TRNP1Q6NT89 227 aa15.52■□□□□ 0.07
DDX55-209ENST00000542286 MAIP1Q8WWC4 291 aa15.52■□□□□ 0.07
DDX55-209ENST00000542286 CENPTQ96BT3 561 aa15.52■□□□□ 0.07
DDX55-209ENST00000542286 FAM167AQ96KS9 214 aa15.52■□□□□ 0.07
DDX55-209ENST00000542286 CALN1Q9BXU9 219 aa15.52■□□□□ 0.07
DDX55-209ENST00000542286 MAGEB5Q9BZ81 275 aa15.52■□□□□ 0.07
DDX55-209ENST00000542286 GPATCH2LQ9NWQ4 482 aa15.52■□□□□ 0.07
DDX55-209ENST00000542286 NOP53Q9NZM5 478 aaKnown RBP15.52■□□□□ 0.07
DDX55-209ENST00000542286 LOC285556D6RIA3 1793 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 TRIP11Q15643 1979 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 CFAP73A6NFT4 308 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 C3orf70A6NLC5 250 aaPredicted RBP15.51■□□□□ 0.07
DDX55-209ENST00000542286 ASAP2O43150 1006 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 MICAL2O94851 1124 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 TJP3O95049 919 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 GCLCP48506 637 aaPredicted RBP15.51■□□□□ 0.07
DDX55-209ENST00000542286 ENPEPQ07075 957 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 ZNF268Q14587 947 aaPredicted RBP15.51■□□□□ 0.07
DDX55-209ENST00000542286 SLC10A6Q3KNW5 377 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 TFDP3Q5H9I0 405 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 GLRA4Q5JXX5 417 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 MFSD5Q6N075 450 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 ALLCQ8N6M5 410 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 HEXIM2Q96MH2 286 aaKnown RBP15.51■□□□□ 0.07
DDX55-209ENST00000542286 SH3GL3Q99963 347 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 TMEM109Q9BVC6 243 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 AGAP1Q9UPQ3 857 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 DNAJC25-GNG10A0A024R161 153 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 LGALS2P05162 132 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 ABCD1P33897 745 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 SLC25A11Q02978 314 aaKnown RBP15.51■□□□□ 0.07
DDX55-209ENST00000542286 ITIH4Q14624 930 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.51■□□□□ 0.07
DDX55-209ENST00000542286 PIGWQ7Z7B1 504 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 ZC3H18Q86VM9 953 aaKnown RBP15.51■□□□□ 0.07
DDX55-209ENST00000542286 UNC45BQ8IWX7 931 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 RBM41Q96IZ5 413 aaKnown RBP15.51■□□□□ 0.07
DDX55-209ENST00000542286 PEBP4Q96S96 227 aa15.51■□□□□ 0.07
DDX55-209ENST00000542286 EXOC1LA0A1B0GW35 172 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 KLHL33A6NCF5 533 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 DNALI1O14645 258 aaPredicted RBP15.5■□□□□ 0.07
DDX55-209ENST00000542286 SSTR1P30872 391 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 ATP11AP98196 1134 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 PDIA2Q13087 525 aaKnown RBP15.5■□□□□ 0.07
DDX55-209ENST00000542286 OASLQ15646 514 aaKnown RBP15.5■□□□□ 0.07
DDX55-209ENST00000542286 PKN2Q16513 984 aaKnown RBP15.5■□□□□ 0.07
DDX55-209ENST00000542286 AP1ARQ63HQ0 302 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 PLPPR4Q7Z2D5 763 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 TRPM8Q7Z2W7 1104 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 XYLT1Q86Y38 959 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 ANKRD13AQ8IZ07 590 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 KLF6Q99612 283 aaPredicted RBP15.5■□□□□ 0.07
DDX55-209ENST00000542286 SMARCAD1Q9H4L7 1026 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 PDZD7Q9H5P4 517 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 FAM49BQ9NUQ9 324 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.5■□□□□ 0.07
DDX55-209ENST00000542286 A0A0G2JMZ2 1700 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 LRRC37A2A6NM11 1700 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 SPDYE5A6NIY4 337 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 RASA4BC9J798 803 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 RASA4O43374 803 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 SMNDC1O75940 238 aaKnown RBP eCLIP15.5■□□□□ 0.07
DDX55-209ENST00000542286 VCPP55072 806 aaKnown RBP15.5■□□□□ 0.07
DDX55-209ENST00000542286 KCNJ2P63252 427 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 ARHGAP1Q07960 439 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 FNBP1LQ5T0N5 605 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 FAM102AQ5T9C2 384 aaPredicted RBP15.5■□□□□ 0.07
DDX55-209ENST00000542286 TAOK1Q7L7X3 1001 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 FAM71DQ8N9W8 422 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 NLRP7Q8WX94 980 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 SERPINB12Q96P63 405 aa15.5■□□□□ 0.07
DDX55-209ENST00000542286 A0A1W2PPM1 405 aa15.49■□□□□ 0.07
DDX55-209ENST00000542286 B4GALT4O60513 344 aa15.49■□□□□ 0.07
DDX55-209ENST00000542286 MIPP30301 263 aa15.49■□□□□ 0.07
DDX55-209ENST00000542286 FOXN2P32314 431 aa15.49■□□□□ 0.07
DDX55-209ENST00000542286 MAN1A1P33908 653 aa15.49■□□□□ 0.07
DDX55-209ENST00000542286 PTPN11Q06124 597 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms