RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CSRP1P21291 193 aaKnown RBP15.28■□□□□ 0.04
VARS-228ENST00000495010 DDIT3P35638 169 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 CFAP221Q4G0U5 840 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 C4orf50Q6ZRC1 276 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 DYMQ7RTS9 669 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 SFR1Q86XK3 245 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 ADGRF2Q8IZF7 708 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 CCDC33Q8N5R6 958 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 LRRC52Q8N7C0 313 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 SPATA18Q8TC71 538 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 USP33Q8TEY7 942 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 LRRC15Q8TF66 581 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 FUBP3Q96I24 572 aaKnown RBP eCLIP15.28■□□□□ 0.04
VARS-228ENST00000495010 CNOT6LQ96LI5 555 aaKnown RBP15.28■□□□□ 0.04
VARS-228ENST00000495010 ACCSQ96QU6 501 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 ADAM33Q9BZ11 813 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 MRPL44Q9H9J2 332 aaKnown RBP15.28■□□□□ 0.04
VARS-228ENST00000495010 ITGA11Q9UKX5 1188 aa15.28■□□□□ 0.04
VARS-228ENST00000495010 ZFHX4Q86UP3 3567 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 TMEM8BA6NDV4 472 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 MYMKA6NI61 221 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 SPINK2P20155 84 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 ANXA13P27216 316 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 GJB2P29033 226 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 ADSSP30520 456 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 RBP5P82980 135 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 LMAN2Q12907 356 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 LMBRD2Q68DH5 695 aaPredicted RBP15.27■□□□□ 0.04
VARS-228ENST00000495010 RASSF3Q86WH2 238 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 BRSK2Q8IWQ3 736 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 SYCP3Q8IZU3 236 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 TOP6BLQ8N6T0 577 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 C1orf127Q8N9H9 656 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 KDF1Q8NAX2 398 aaPredicted RBP15.27■□□□□ 0.04
VARS-228ENST00000495010 SAAL1Q96ER3 474 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 SPACA7Q96KW9 195 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 NUSAP1Q9BXS6 441 aaKnown RBP15.27■□□□□ 0.04
VARS-228ENST00000495010 IKZF4Q9H2S9 585 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 SLC32A1Q9H598 525 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 RBAKQ9NYW8 714 aaPredicted RBP15.27■□□□□ 0.04
VARS-228ENST00000495010 TRPM5Q9NZQ8 1165 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 GCNT4Q9P109 453 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 BCCIPQ9P287 314 aaKnown RBP eCLIP15.27■□□□□ 0.04
VARS-228ENST00000495010 MAGEC2Q9UBF1 373 aaPredicted RBP15.27■□□□□ 0.04
VARS-228ENST00000495010 CCDC39Q9UFE4 941 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 MMP17Q9ULZ9 603 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 ARHGAP26Q9UNA1 814 aa15.27■□□□□ 0.04
VARS-228ENST00000495010 PATE3B3GLJ2 98 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 K7EQS6 105 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 TMEM191BP0C7N4 346 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 TCF3P15923 654 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 BCKDHBP21953 392 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 GRIK1P39086 918 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 IRX4P78413 519 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 MRPS21P82921 87 aaKnown RBP15.26■□□□□ 0.03
VARS-228ENST00000495010 MYO1EQ12965 1108 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 CRY1Q16526 586 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 LPCAT2Q7L5N7 544 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 PKMYT1Q99640 499 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 SCNM1Q9BWG6 230 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 POLMQ9NP87 494 aaPredicted RBP15.26■□□□□ 0.03
VARS-228ENST00000495010 GDAP2Q9NXN4 497 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 EHD2Q9NZN4 543 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 TBC1D7Q9P0N9 293 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 SEL1LQ9UBV2 794 aa15.26■□□□□ 0.03
VARS-228ENST00000495010 THADAQ6YHU6 1953 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 LEFTY2O00292 366 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 CDX4O14627 284 aaPredicted RBP15.25■□□□□ 0.03
VARS-228ENST00000495010 SLC9A3R1O14745 358 aaPredicted RBP15.25■□□□□ 0.03
VARS-228ENST00000495010 GCNT3O95395 438 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 GAP43P17677 238 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 PFKLP17858 780 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 OPRD1P41143 372 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 MAGEA11P43364 429 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 BYSLQ13895 437 aaKnown RBP15.25■□□□□ 0.03
VARS-228ENST00000495010 MAPRE1Q15691 268 aaKnown RBP15.25■□□□□ 0.03
VARS-228ENST00000495010 TRIM61Q5EBN2 209 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 L1TD1Q5T7N2 865 aaKnown RBP15.25■□□□□ 0.03
VARS-228ENST00000495010 VSTM1Q6UX27 236 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 OSTM1Q86WC4 334 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 PGBD3Q8N328 593 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 DEFB124Q8NES8 71 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 MDGA1Q8NFP4 955 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 WHAMMQ8TF30 809 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 ANKRD36BP1Q96IX9 119 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 KIF2CQ99661 725 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 SYT15Q9BQS2 421 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 EVLQ9UI08 416 aaPredicted RBP15.25■□□□□ 0.03
VARS-228ENST00000495010 PCDHB13Q9Y5F0 798 aa15.25■□□□□ 0.03
VARS-228ENST00000495010 NUP205Q92621 2012 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 GOLGA8IPA6NC78 632 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 GOLGA8JA6NMD2 632 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 GABRDO14764 452 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 HCRTO43612 131 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 KLF8O95600 359 aaPredicted RBP15.24■□□□□ 0.03
VARS-228ENST00000495010 ABL1P00519 1130 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 APODP05090 189 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 GARTP22102 1010 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 BDNFP23560 247 aa15.24■□□□□ 0.03
VARS-228ENST00000495010 DPP6P42658 865 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms