RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 PAPSS2O95340 614 aaPredicted RBP8.86□□□□□ -0.99
APP-216ENST00000491395 HSP90AA1P07900 732 aaKnown RBP8.86□□□□□ -0.99
APP-216ENST00000491395 GNL1P36915 607 aaPredicted RBP8.86□□□□□ -0.99
APP-216ENST00000491395 GRIK1P39086 918 aa8.86□□□□□ -0.99
APP-216ENST00000491395 MAGEA11P43364 429 aa8.86□□□□□ -0.99
APP-216ENST00000491395 GALK1P51570 392 aa8.86□□□□□ -0.99
APP-216ENST00000491395 MYL6P60660 151 aa8.86□□□□□ -0.99
APP-216ENST00000491395 USP46P62068 366 aa8.86□□□□□ -0.99
APP-216ENST00000491395 CYP27A1Q02318 531 aa8.86□□□□□ -0.99
APP-216ENST00000491395 DNM1Q05193 864 aaKnown RBP8.86□□□□□ -0.99
APP-216ENST00000491395 SIM2Q14190 667 aaPredicted RBP8.86□□□□□ -0.99
APP-216ENST00000491395 ZNF268Q14587 947 aaPredicted RBP8.86□□□□□ -0.99
APP-216ENST00000491395 PSMD6Q15008 389 aa8.86□□□□□ -0.99
APP-216ENST00000491395 PDGFRLQ15198 375 aa8.86□□□□□ -0.99
APP-216ENST00000491395 BMT2Q1RMZ1 405 aa8.86□□□□□ -0.99
APP-216ENST00000491395 TMEM196Q5HYL7 178 aa8.86□□□□□ -0.99
APP-216ENST00000491395 MDH1BQ5I0G3 518 aa8.86□□□□□ -0.99
APP-216ENST00000491395 CC2D1AQ6P1N0 951 aaPredicted RBP8.86□□□□□ -0.99
APP-216ENST00000491395 VSTM1Q6UX27 236 aa8.86□□□□□ -0.99
APP-216ENST00000491395 C4orf50Q6ZRC1 276 aa8.86□□□□□ -0.99
APP-216ENST00000491395 HS2ST1Q7LGA3 356 aa8.86□□□□□ -0.99
APP-216ENST00000491395 DGLUCYQ7Z3D6 616 aa8.86□□□□□ -0.99
APP-216ENST00000491395 LONP2Q86WA8 852 aa8.86□□□□□ -0.99
APP-216ENST00000491395 SYNPOQ8N3V7 929 aa8.86□□□□□ -0.99
APP-216ENST00000491395 ARL14EPQ8N8R7 260 aaPredicted RBP8.86□□□□□ -0.99
APP-216ENST00000491395 PLEKHO2Q8TD55 490 aa8.86□□□□□ -0.99
APP-216ENST00000491395 SECISBP2LQ93073 1101 aaKnown RBP8.86□□□□□ -0.99
APP-216ENST00000491395 FNBP1Q96RU3 617 aa8.86□□□□□ -0.99
APP-216ENST00000491395 LINC00597Q9H2U6 94 aa8.86□□□□□ -0.99
APP-216ENST00000491395 SNX25Q9H3E2 840 aa8.86□□□□□ -0.99
APP-216ENST00000491395 KIF9Q9HAQ2 790 aa8.86□□□□□ -0.99
APP-216ENST00000491395 MAGEF1Q9HAY2 307 aa8.86□□□□□ -0.99
APP-216ENST00000491395 POLR3BQ9NW08 1133 aaPredicted RBP8.86□□□□□ -0.99
APP-216ENST00000491395 FAM13BQ9NYF5 915 aa8.86□□□□□ -0.99
APP-216ENST00000491395 DLL3Q9NYJ7 618 aa8.86□□□□□ -0.99
APP-216ENST00000491395 GCNT4Q9P109 453 aa8.86□□□□□ -0.99
APP-216ENST00000491395 UXTQ9UBK9 157 aaPredicted RBP8.86□□□□□ -0.99
APP-216ENST00000491395 SERTAD1Q9UHV2 236 aa8.86□□□□□ -0.99
APP-216ENST00000491395 GMEB2Q9UKD1 530 aa8.86□□□□□ -0.99
APP-216ENST00000491395 RCOR1Q9UKL0 485 aa8.86□□□□□ -0.99
APP-216ENST00000491395 RAB23Q9ULC3 237 aa8.86□□□□□ -0.99
APP-216ENST00000491395 USP18Q9UMW8 372 aa8.86□□□□□ -0.99
APP-216ENST00000491395 UBE4BO95155 1302 aa8.85□□□□□ -0.99
APP-216ENST00000491395 TRAV19A0A0A6YYK7 116 aa8.85□□□□□ -0.99
APP-216ENST00000491395 PVALEFA0A1B0GWK0 134 aa8.85□□□□□ -0.99
APP-216ENST00000491395 MED19A0JLT2 244 aaPredicted RBP8.85□□□□□ -0.99
APP-216ENST00000491395 C2orf78A6NCI8 922 aa8.85□□□□□ -0.99
APP-216ENST00000491395 KLRC4O43908 158 aa8.85□□□□□ -0.99
APP-216ENST00000491395 EXOC3O60645 756 aa8.85□□□□□ -0.99
APP-216ENST00000491395 TACC1O75410 805 aa8.85□□□□□ -0.99
APP-216ENST00000491395 EGFP01133 1207 aa8.85□□□□□ -0.99
APP-216ENST00000491395 CKMP06732 381 aa8.85□□□□□ -0.99
APP-216ENST00000491395 USP17L7P0C7H9 530 aa8.85□□□□□ -0.99
APP-216ENST00000491395 PDIA4P13667 645 aaKnown RBP8.85□□□□□ -0.99
APP-216ENST00000491395 PTPN1P18031 435 aaKnown RBP8.85□□□□□ -0.99
APP-216ENST00000491395 HDCP19113 662 aa8.85□□□□□ -0.99
APP-216ENST00000491395 GJA4P35212 333 aa8.85□□□□□ -0.99
APP-216ENST00000491395 PXNP49023 591 aaPredicted RBP8.85□□□□□ -0.99
APP-216ENST00000491395 CASP4P49662 377 aa8.85□□□□□ -0.99
APP-216ENST00000491395 CACNA2D1P54289 1103 aa8.85□□□□□ -0.99
APP-216ENST00000491395 SNRPFP62306 86 aaKnown RBP8.85□□□□□ -0.99
APP-216ENST00000491395 FAM160A1Q05DH4 1040 aa8.85□□□□□ -0.99
APP-216ENST00000491395 SPEM2Q0P670 501 aa8.85□□□□□ -0.99
APP-216ENST00000491395 GRSF1Q12849 480 aaKnown RBP eCLIP8.85□□□□□ -0.99
APP-216ENST00000491395 STK4Q13043 487 aa8.85□□□□□ -0.99
APP-216ENST00000491395 TRPC3Q13507 836 aa8.85□□□□□ -0.99
APP-216ENST00000491395 PUM1Q14671 1186 aaKnown RBP eCLIP8.85□□□□□ -0.99
APP-216ENST00000491395 MTF1Q14872 753 aa8.85□□□□□ -0.99
APP-216ENST00000491395 MAPRE1Q15691 268 aaKnown RBP8.85□□□□□ -0.99
APP-216ENST00000491395 ZNF77Q15935 545 aa8.85□□□□□ -0.99
APP-216ENST00000491395 KNOP1Q1ED39 458 aaKnown RBP8.85□□□□□ -0.99
APP-216ENST00000491395 WDR72Q3MJ13 1102 aa8.85□□□□□ -0.99
APP-216ENST00000491395 LAIR1Q6GTX8 287 aa8.85□□□□□ -0.99
APP-216ENST00000491395 C12orf56Q8IXR9 622 aa8.85□□□□□ -0.99
APP-216ENST00000491395 GPR161Q8N6U8 529 aaKnown RBP8.85□□□□□ -0.99
APP-216ENST00000491395 OR6B3Q8NGW1 331 aa8.85□□□□□ -0.99
APP-216ENST00000491395 MYCBPAPQ8TBZ2 947 aa8.85□□□□□ -0.99
APP-216ENST00000491395 SH3RF2Q8TEC5 729 aa8.85□□□□□ -0.99
APP-216ENST00000491395 ELMO3Q96BJ8 720 aa8.85□□□□□ -0.99
APP-216ENST00000491395 PAGE5Q96GU1 130 aa8.85□□□□□ -0.99
APP-216ENST00000491395 PCED1BQ96HM7 432 aa8.85□□□□□ -0.99
APP-216ENST00000491395 CHAMP1Q96JM3 812 aa8.85□□□□□ -0.99
APP-216ENST00000491395 SPATA17Q96L03 361 aa8.85□□□□□ -0.99
APP-216ENST00000491395 DPEP3Q9H4B8 488 aa8.85□□□□□ -0.99
APP-216ENST00000491395 ECT2Q9H8V3 914 aa8.85□□□□□ -0.99
APP-216ENST00000491395 TMEM30AQ9NV96 361 aa8.85□□□□□ -0.99
APP-216ENST00000491395 DUS2Q9NX74 493 aaKnown RBP8.85□□□□□ -0.99
APP-216ENST00000491395 NXF1Q9UBU9 619 aaKnown RBP8.85□□□□□ -0.99
APP-216ENST00000491395 WNT6Q9Y6F9 365 aa8.85□□□□□ -0.99
APP-216ENST00000491395 MIA3Q5JRA6 1907 aa8.85□□□□□ -0.99
APP-216ENST00000491395 COL4A2P08572 1712 aa8.85□□□□□ -0.99
APP-216ENST00000491395 A8MXQ7 604 aa8.84□□□□□ -0.99
APP-216ENST00000491395 F8VP50 259 aa8.84□□□□□ -0.99
APP-216ENST00000491395 CLDN5O00501 218 aa8.84□□□□□ -0.99
APP-216ENST00000491395 ACTN4O43707 911 aaKnown RBP8.84□□□□□ -0.99
APP-216ENST00000491395 RNF40O75150 1001 aa8.84□□□□□ -0.99
APP-216ENST00000491395 PHACTR2O75167 634 aa8.84□□□□□ -0.99
APP-216ENST00000491395 RETP07949 1114 aa8.84□□□□□ -0.99
APP-216ENST00000491395 FAM163BP0C2L3 166 aa8.84□□□□□ -0.99
APP-216ENST00000491395 SLFN14P0C7P3 912 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms