RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 NDRG2Q9UN36 371 aaKnown RBP20.2■□□□□ 0.82
COL5A1-203ENST00000460264 SOBPA7XYQ1 873 aa20.19■□□□□ 0.82
COL5A1-203ENST00000460264 MAPK13O15264 365 aa20.19■□□□□ 0.82
COL5A1-203ENST00000460264 NCAM2O15394 837 aa20.19■□□□□ 0.82
COL5A1-203ENST00000460264 AVPR1AP37288 418 aa20.19■□□□□ 0.82
COL5A1-203ENST00000460264 MLLT6P55198 1093 aaPredicted RBP20.19■□□□□ 0.82
COL5A1-203ENST00000460264 ZCWPW2Q504Y3 356 aa20.19■□□□□ 0.82
COL5A1-203ENST00000460264 ZNF667Q5HYK9 610 aa20.19■□□□□ 0.82
COL5A1-203ENST00000460264 C1orf220Q5T0J3 134 aa20.19■□□□□ 0.82
COL5A1-203ENST00000460264 MON1AQ86VX9 555 aa20.19■□□□□ 0.82
COL5A1-203ENST00000460264 MAML2Q8IZL2 1156 aaPredicted RBP20.19■□□□□ 0.82
COL5A1-203ENST00000460264 CELF5Q8N6W0 485 aaKnown RBP20.19■□□□□ 0.82
COL5A1-203ENST00000460264 FAM3CQ92520 227 aa20.19■□□□□ 0.82
COL5A1-203ENST00000460264 USP13Q92995 863 aaPredicted RBP20.19■□□□□ 0.82
COL5A1-203ENST00000460264 CCDC34Q96HJ3 373 aa20.19■□□□□ 0.82
COL5A1-203ENST00000460264 SPATA17Q96L03 361 aa20.19■□□□□ 0.82
COL5A1-203ENST00000460264 CEP295NLQ96MC4 621 aa20.19■□□□□ 0.82
COL5A1-203ENST00000460264 CCL26Q9Y258 94 aa20.19■□□□□ 0.82
COL5A1-203ENST00000460264 PRR23AA6NEV1 266 aa20.18■□□□□ 0.82
COL5A1-203ENST00000460264 IKBKBO14920 756 aa20.18■□□□□ 0.82
COL5A1-203ENST00000460264 AKAP3O75969 853 aa20.18■□□□□ 0.82
COL5A1-203ENST00000460264 CLSTN1O94985 981 aa20.18■□□□□ 0.82
COL5A1-203ENST00000460264 PTPN1P18031 435 aaKnown RBP20.18■□□□□ 0.82
COL5A1-203ENST00000460264 RAP1GAPP47736 663 aa20.18■□□□□ 0.82
COL5A1-203ENST00000460264 PLCB2Q00722 1185 aa20.18■□□□□ 0.82
COL5A1-203ENST00000460264 PNOCQ13519 176 aa20.18■□□□□ 0.82
COL5A1-203ENST00000460264 SCARA5Q6ZMJ2 495 aa20.18■□□□□ 0.82
COL5A1-203ENST00000460264 ASCL5Q7RTU5 278 aa20.18■□□□□ 0.82
COL5A1-203ENST00000460264 B3GALNT2Q8NCR0 500 aa20.18■□□□□ 0.82
COL5A1-203ENST00000460264 ELMO3Q96BJ8 720 aa20.18■□□□□ 0.82
COL5A1-203ENST00000460264 MSANTD3Q96H12 275 aa20.18■□□□□ 0.82
COL5A1-203ENST00000460264 WDR87Q6ZQQ6 2873 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 RIF1Q5UIP0 2472 aaKnown RBP20.17■□□□□ 0.82
COL5A1-203ENST00000460264 GOLGA6L4A6NEF3 574 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 A8MXQ7 604 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 SP9P0CG40 484 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 CCNE1P24864 410 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 GRIK1P39086 918 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 SOX9P48436 509 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 VAMP7P51809 220 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 CDH8P55286 799 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 SV2AQ7L0J3 742 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 SMYD4Q8IYR2 804 aaPredicted RBP20.17■□□□□ 0.82
COL5A1-203ENST00000460264 ENGASEQ8NFI3 743 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 NKD2Q969F2 451 aaPredicted RBP20.17■□□□□ 0.82
COL5A1-203ENST00000460264 ELOVL4Q9GZR5 314 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 C8orf33Q9H7E9 229 aaPredicted RBP20.17■□□□□ 0.82
COL5A1-203ENST00000460264 KIF9Q9HAQ2 790 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 TDP1Q9NUW8 608 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 GTSE1Q9NYZ3 720 aa20.17■□□□□ 0.82
COL5A1-203ENST00000460264 F8VP50 259 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 TRIM66O15016 1216 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 LAMTOR5O43504 91 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 RPL13P26373 211 aaKnown RBP20.16■□□□□ 0.82
COL5A1-203ENST00000460264 ANXA13P27216 316 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 CTHP32929 405 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 KPNA1P52294 538 aaPredicted RBP20.16■□□□□ 0.82
COL5A1-203ENST00000460264 CACNA2D1P54289 1103 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 USP46P62068 366 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 FAM160A1Q05DH4 1040 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 TNK2Q07912 1038 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 ZNF268Q14587 947 aaPredicted RBP20.16■□□□□ 0.82
COL5A1-203ENST00000460264 C1orf228Q6PIY5 440 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 INTS8Q75QN2 995 aaKnown RBP20.16■□□□□ 0.82
COL5A1-203ENST00000460264 FAM186BQ8IYM0 893 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 RIN3Q8TB24 985 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 ZNF518BQ9C0D4 1074 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 SDCBP2Q9H190 292 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 CHRDQ9H2X0 955 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 TRPC7Q9HCX4 862 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 TMEM30AQ9NV96 361 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 THG1LQ9NWX6 298 aaKnown RBP20.16■□□□□ 0.82
COL5A1-203ENST00000460264 R4GN57 208 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 FAM186AA6NE01 2351 aa20.16■□□□□ 0.82
COL5A1-203ENST00000460264 MYH10P35580 1976 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 SPECC1L-ADORA2AF8WAN1 911 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 ASS1P00966 412 aaKnown RBP20.15■□□□□ 0.82
COL5A1-203ENST00000460264 TRIM49P0CI25 452 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 TRIM49CP0CI26 452 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 P4HA1P13674 534 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 PIK3CAP42336 1068 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 NOP14P78316 857 aaKnown RBP20.15■□□□□ 0.82
COL5A1-203ENST00000460264 SGSM1Q2NKQ1 1148 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 EDRF1Q3B7T1 1238 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 TXNDC11Q6PKC3 985 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 DENND5BQ6ZUT9 1274 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 RALGPS2Q86X27 583 aaPredicted RBP20.15■□□□□ 0.82
COL5A1-203ENST00000460264 TTC8Q8TAM2 541 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 TAF4BQ92750 862 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 C8orf48Q96LL4 319 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 SLC22A12Q96S37 553 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 FAM83CQ9BQN1 747 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 TTLL2Q9BWV7 592 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 B3GNT5Q9BYG0 378 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 RMND1Q9NWS8 449 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 FBXO4Q9UKT5 387 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 DMDP11532 3685 aa20.15■□□□□ 0.82
COL5A1-203ENST00000460264 TRAV19A0A0A6YYK7 116 aa20.14■□□□□ 0.81
COL5A1-203ENST00000460264 C2orf78A6NCI8 922 aa20.14■□□□□ 0.81
COL5A1-203ENST00000460264 CLDN5O00501 218 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms