RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 AP1G2O75843 785 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 CD58P19256 250 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 KRT31Q15323 416 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 ZSCAN23Q3MJ62 389 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 DDX42Q86XP3 938 aaKnown RBP eCLIP11.35□□□□□ -0.59
UBR4-208ENST00000459947 NUP93Q8N1F7 819 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 CYFIP2Q96F07 1278 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 TRPV4Q9HBA0 871 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 CSNK1G1Q9HCP0 422 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 CYLDQ9NQC7 956 aa11.35□□□□□ -0.59
UBR4-208ENST00000459947 SAMSN1Q9NSI8 373 aaKnown RBP11.35□□□□□ -0.59
UBR4-208ENST00000459947 SYCE3A1L190 88 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 ECI2O75521 394 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 ZNF18P17022 549 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 ZNF268Q14587 947 aaPredicted RBP11.34□□□□□ -0.59
UBR4-208ENST00000459947 NFKBIBQ15653 356 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 TATDN2Q93075 761 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 TSPY26PQ9H489 355 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 KRT82Q9NSB4 513 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 TMLHEQ9NVH6 421 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 FANCLQ9NW38 375 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 SLC27A5Q9Y2P5 690 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 MYO7AQ13402 2215 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 PTPRDP23468 1912 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 TNFRSF10AO00220 468 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 SART1O43290 800 aaKnown RBP11.34□□□□□ -0.59
UBR4-208ENST00000459947 BDNFP23560 247 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 MSANTD3Q96H12 275 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 RPGRIP1Q96KN7 1286 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 MIS12Q9H081 205 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 CD19P15391 556 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 CYP2F1P24903 491 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 RAD23BP54727 409 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 PPP1R2P3Q6NXS1 205 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 TMC8Q8IU68 726 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 ANKRD52Q8NB46 1076 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 RBBP8NLQ8NC74 664 aaPredicted RBP11.34□□□□□ -0.59
UBR4-208ENST00000459947 EXOC4Q96A65 974 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 NOX5Q96PH1 765 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 DUSP16Q9BY84 665 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 UBE2TQ9NPD8 197 aaPredicted RBP11.34□□□□□ -0.59
UBR4-208ENST00000459947 TAB2Q9NYJ8 693 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 MYO6Q9UM54 1294 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 SORCS3Q9UPU3 1222 aa11.34□□□□□ -0.59
UBR4-208ENST00000459947 CBFA2T2O43439 604 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 LAMP2P13473 410 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 NPR3P17342 541 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 ATF6P18850 670 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 PON1P27169 355 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 YWHAQP27348 245 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 TUBP50607 506 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 PFKPQ01813 784 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 BST2Q10589 180 aaKnown RBP11.33□□□□□ -0.6
UBR4-208ENST00000459947 SCML4Q8N228 414 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 MSANTD4Q8NCY6 345 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 ERGIC2Q96RQ1 377 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 EDEM3Q9BZQ6 932 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 CEP83Q9Y592 693 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 TCF3P15923 654 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 GABRR2P28476 465 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 ACADSBP45954 432 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 PTK2Q05397 1052 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 CNGA2Q16280 664 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 PTPN21Q16825 1174 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 MIIPQ5JXC2 388 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 C1orf228Q6PIY5 440 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 FUKQ8N0W3 1084 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 SLC4A11Q8NBS3 891 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 NEK11Q8NG66 645 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 WHAMMQ8TF30 809 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 LRRC3Q9BY71 257 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 ZNF518BQ9C0D4 1074 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 DPEP3Q9H4B8 488 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 C2orf16Q68DN1 1984 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 C2CD4DB7Z1M9 353 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 DPYSL4O14531 572 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 LRMPQ12912 555 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 MTMR3Q13615 1198 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 TMEM270Q6UE05 265 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 NPAS3Q8IXF0 933 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 ZNF276Q8N554 614 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 SLC2A14Q8TDB8 520 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 ELSPBP1Q96BH3 223 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 ATXN3LQ9H3M9 355 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 IL37Q9NZH6 218 aa11.33□□□□□ -0.6
UBR4-208ENST00000459947 TRAV19A0A0A6YYK7 116 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 ANHXE9PGG2 379 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 DCXO43602 365 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 ATP2C2O75185 946 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 USP17L7P0C7H9 530 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 KRT5P13647 590 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 ZNF132P52740 706 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 PLCB2Q00722 1185 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 LRSAM1Q6UWE0 723 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 LCLAT1Q6UWP7 414 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 MON1AQ86VX9 555 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 SHC3Q92529 594 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 SMARCD2Q92925 531 aa11.32□□□□□ -0.6
UBR4-208ENST00000459947 LSM14BQ9BX40 385 aaKnown RBP11.32□□□□□ -0.6
UBR4-208ENST00000459947 A0A1W2PQC6 194 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms