RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 KLHDC7AQ5VTJ3 777 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 FNDC7Q5VTL7 733 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 NAIF1Q69YI7 327 aaPredicted RBP5.13□□□□□ -1.59
LINC00393-202ENST00000452852 HIBCHQ6NVY1 386 aaPredicted RBP5.13□□□□□ -1.59
LINC00393-202ENST00000452852 TUBA3EQ6PEY2 450 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 Q6ZVL8 140 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 DOK3Q7L591 496 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 ARHGEF25Q86VW2 580 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 CLASRPQ8N2M8 674 aaKnown RBP5.13□□□□□ -1.59
LINC00393-202ENST00000452852 CCDC33Q8N5R6 958 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 CELF5Q8N6W0 485 aaKnown RBP5.13□□□□□ -1.59
LINC00393-202ENST00000452852 SPATA5Q8NB90 893 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 OR52N2Q8NGI0 321 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 ZNF480Q8WV37 535 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 AS3MTQ9HBK9 375 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 ZNF287Q9HBT7 754 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 SPON1Q9HCB6 807 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 STARD7Q9NQZ5 370 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 PNPOQ9NVS9 261 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.13□□□□□ -1.59
LINC00393-202ENST00000452852 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.13□□□□□ -1.59
LINC00393-202ENST00000452852 TRPS1Q9UHF7 1281 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 OGDHLQ9ULD0 1010 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 CASZ1Q86V15 1759 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 BTAF1O14981 1849 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 KIF20BQ96Q89 1820 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 TNS2Q63HR2 1409 aa5.13□□□□□ -1.59
LINC00393-202ENST00000452852 RGPD2P0DJD1 1756 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 FAM171A2A8MVW0 826 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 SLC16A6O15403 523 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 FAM20BO75063 409 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 ZNF202O95125 648 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 RPLP2P05387 115 aaKnown RBP5.12□□□□□ -1.59
LINC00393-202ENST00000452852 HARSP12081 509 aaKnown RBP5.12□□□□□ -1.59
LINC00393-202ENST00000452852 TYRP14679 529 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 CRHR1P34998 444 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 TECP42680 631 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 GRK6P43250 576 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 SLC6A9P48067 706 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 FMO1Q01740 532 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 TARDBPQ13148 414 aaKnown RBP eCLIP5.12□□□□□ -1.59
LINC00393-202ENST00000452852 PMS2P11Q13670 270 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 RABL3Q5HYI8 236 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 METTL24Q5JXM2 366 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 PRAMEF14Q5SWL7 426 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 ANKS6Q68DC2 871 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 LVRNQ6Q4G3 990 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 MMS22LQ6ZRQ5 1243 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 GPRIN1Q7Z2K8 1008 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 SESTD1Q86VW0 696 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 NME8Q8N427 588 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 REPS2Q8NFH8 660 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.12□□□□□ -1.59
LINC00393-202ENST00000452852 ANKS1AQ92625 1134 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 CEP95Q96GE4 821 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 TMX4Q9H1E5 349 aaPredicted RBP5.12□□□□□ -1.59
LINC00393-202ENST00000452852 GJB4Q9NTQ9 266 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 TDP1Q9NUW8 608 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 MAP3K20Q9NYL2 800 aaKnown RBP5.12□□□□□ -1.59
LINC00393-202ENST00000452852 CPNE7Q9UBL6 633 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 ABCF2Q9UG63 623 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 GPR52Q9Y2T5 361 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 PCDHA1Q9Y5I3 950 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 UTRNP46939 3433 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 NINLQ9Y2I6 1382 aa5.12□□□□□ -1.59
LINC00393-202ENST00000452852 EDC4Q6P2E9 1401 aaKnown RBP5.12□□□□□ -1.59
LINC00393-202ENST00000452852 GOLGB1Q14789 3259 aaKnown RBP5.12□□□□□ -1.59
LINC00393-202ENST00000452852 GRXCR1A8MXD5 290 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 PRR5-ARHGAP8B1AHC4 643 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 FRS3O43559 492 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 TLR5O60602 858 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 AGR2O95994 175 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 SRGNP10124 158 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 BRAFP15056 766 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 TSHRP16473 764 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 PTPN7P35236 360 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 MAPK9P45984 424 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 PTTG1IPP53801 180 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 SUMO3P55854 103 aaPredicted RBP5.11□□□□□ -1.59
LINC00393-202ENST00000452852 CDC42EP1Q00587 391 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 SNAPC2Q13487 334 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 CNGA2Q16280 664 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 CSRP2Q16527 193 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 MFSD14BQ5SR56 506 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 TLDC1Q6P9B6 456 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 USP51Q70EK9 711 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 PDZD4Q76G19 769 aaPredicted RBP5.11□□□□□ -1.59
LINC00393-202ENST00000452852 RSPH3Q86UC2 560 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 ZFPM1Q8IX07 1006 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 SYTL1Q8IYJ3 562 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 TEX19Q8NA77 164 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 CCHCR1Q8TD31 782 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 HOXB13Q92826 284 aaPredicted RBP5.11□□□□□ -1.59
LINC00393-202ENST00000452852 TMX3Q96JJ7 454 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 MRGPRX4Q96LA9 322 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 EIF2AK1Q9BQI3 630 aaKnown RBP5.11□□□□□ -1.59
LINC00393-202ENST00000452852 LDAHQ9H6V9 325 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 BCO1Q9HAY6 547 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 SLC2A4RGQ9NR83 387 aa5.11□□□□□ -1.59
LINC00393-202ENST00000452852 STK32BQ9NY57 414 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms