RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 ATP2C2O75185 946 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 TADA3O75528 432 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 FAM163BP0C2L3 166 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 ARSAP15289 507 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 WARSP23381 471 aaKnown RBP22.19■■□□□ 1.14
CPNE1-219ENST00000440240 LMO2P25791 158 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 PDE6CP51160 858 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 GALK1P51570 392 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 CSRP2Q16527 193 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 SNRNP35Q16560 246 aaKnown RBP22.19■■□□□ 1.14
CPNE1-219ENST00000440240 FBXO43Q4G163 708 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 FAM26FQ5R3K3 315 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 TRAPPC11Q7Z392 1133 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 OSCP1Q8WVF1 389 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 KBTBD7Q8WVZ9 684 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 FNBP1Q96RU3 617 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 C7orf25Q9BPX7 421 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 ECT2Q9H8V3 914 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 SEMA4GQ9NTN9 838 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 DUS2Q9NX74 493 aaKnown RBP22.19■■□□□ 1.14
CPNE1-219ENST00000440240 EHD2Q9NZN4 543 aa22.19■■□□□ 1.14
CPNE1-219ENST00000440240 HDCP19113 662 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 TNNI1P19237 187 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 GRIK1P39086 918 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 NR1H3Q13133 447 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 CCDC142Q17RM4 750 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 SHC4Q6S5L8 630 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 RDH13Q8NBN7 331 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 RIN3Q8TB24 985 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 ATP2A3Q93084 1043 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 CHFRQ96EP1 664 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 P2RY13Q9BPV8 354 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 MAGEF1Q9HAY2 307 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 AGPAT3Q9NRZ7 376 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 GCNT4Q9P109 453 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 DENND4CQ5VZ89 1909 aa22.18■■□□□ 1.14
CPNE1-219ENST00000440240 TGFB1I1O43294 461 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 PDGFRBP09619 1106 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 DLATP10515 647 aaKnown RBP22.17■■□□□ 1.14
CPNE1-219ENST00000440240 PFKLP17858 780 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 BDNFP23560 247 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 ANXA13P27216 316 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 GJA4P35212 333 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 GNL1P36915 607 aaPredicted RBP22.17■■□□□ 1.14
CPNE1-219ENST00000440240 IFNAR2P48551 515 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 PSMC1P62191 440 aaKnown RBP22.17■■□□□ 1.14
CPNE1-219ENST00000440240 KCNB1Q14721 858 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 ZNF77Q15935 545 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 DENND5BQ6ZUT9 1274 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 HS2ST1Q7LGA3 356 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 CAMKK1Q8N5S9 505 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 FAM160A2Q8N612 972 aaPredicted RBP22.17■■□□□ 1.14
CPNE1-219ENST00000440240 ARL14EPQ8N8R7 260 aaPredicted RBP22.17■■□□□ 1.14
CPNE1-219ENST00000440240 XXYLT1Q8NBI6 393 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 TTC16Q8NEE8 873 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 MYCBPAPQ8TBZ2 947 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 NETO1Q8TDF5 533 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 MYLPFQ96A32 169 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 SLC22A12Q96S37 553 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 SNX25Q9H3E2 840 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 FBRSL1Q9HCM7 1045 aaKnown RBP22.17■■□□□ 1.14
CPNE1-219ENST00000440240 CRTAC1Q9NQ79 661 aa22.17■■□□□ 1.14
CPNE1-219ENST00000440240 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.17■■□□□ 1.14
CPNE1-219ENST00000440240 ZNF638Q14966 1978 aaKnown RBP22.17■■□□□ 1.14
CPNE1-219ENST00000440240 UBE4BO95155 1302 aa22.16■■□□□ 1.14
CPNE1-219ENST00000440240 TACC1O75410 805 aa22.16■■□□□ 1.14
CPNE1-219ENST00000440240 CST3P01034 146 aaPredicted RBP22.16■■□□□ 1.14
CPNE1-219ENST00000440240 EGFP01133 1207 aa22.16■■□□□ 1.14
CPNE1-219ENST00000440240 TCF3P15923 654 aa22.16■■□□□ 1.14
CPNE1-219ENST00000440240 PPP3CCP48454 512 aa22.16■■□□□ 1.14
CPNE1-219ENST00000440240 CYP27A1Q02318 531 aa22.16■■□□□ 1.14
CPNE1-219ENST00000440240 PSMD6Q15008 389 aa22.16■■□□□ 1.14
CPNE1-219ENST00000440240 PKN3Q6P5Z2 889 aa22.16■■□□□ 1.14
CPNE1-219ENST00000440240 UNC13DQ70J99 1090 aa22.16■■□□□ 1.14
CPNE1-219ENST00000440240 GAB3Q8WWW8 586 aa22.16■■□□□ 1.14
CPNE1-219ENST00000440240 LOXL4Q96JB6 756 aa22.16■■□□□ 1.14
CPNE1-219ENST00000440240 TRPM5Q9NZQ8 1165 aa22.16■■□□□ 1.14
CPNE1-219ENST00000440240 CGNQ9P2M7 1197 aaKnown RBP22.16■■□□□ 1.14
CPNE1-219ENST00000440240 ARHGAP26Q9UNA1 814 aa22.16■■□□□ 1.14
CPNE1-219ENST00000440240 C2orf78A6NCI8 922 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 TRIM66O15016 1216 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 CLIC2O15247 247 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 POLR2DO15514 142 aaKnown RBP22.15■■□□□ 1.14
CPNE1-219ENST00000440240 RNF40O75150 1001 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 CYP2J2P51589 502 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 USP4Q13107 963 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 PRR23CQ6ZRP0 262 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 CACNA2D4Q7Z3S7 1137 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 CCDC26Q8TAB7 109 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 SH3RF2Q8TEC5 729 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 SCFD1Q8WVM8 642 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 CD101Q93033 1021 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 CCDC127Q96BQ5 260 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 PCED1BQ96HM7 432 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 CGRRF1Q99675 332 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 WNT6Q9Y6F9 365 aa22.15■■□□□ 1.14
CPNE1-219ENST00000440240 KIF26AQ9ULI4 1882 aaPredicted RBP22.15■■□□□ 1.14
CPNE1-219ENST00000440240 SDK1Q7Z5N4 2213 aa22.14■■□□□ 1.14
CPNE1-219ENST00000440240 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.14■■□□□ 1.13
CPNE1-219ENST00000440240 PVALEFA0A1B0GWK0 134 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms