RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 ZFYVE19Q96K21 471 aa19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 FAM83CQ9BQN1 747 aa19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 BCO2Q9BYV7 579 aa19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 SMYD3Q9H7B4 428 aa19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 GCNT4Q9P109 453 aa19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 UXTQ9UBK9 157 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 FBXO4Q9UKT5 387 aa19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 AKAP3O75969 853 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 PDGFRBP09619 1106 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 BDNFP23560 247 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 CTHP32929 405 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 USP46P62068 366 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 ENPEPQ07075 957 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 NCOA4Q13772 614 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 GAS6Q14393 721 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 ZNF528Q3MIS6 628 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 SV2AQ7L0J3 742 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 CELF5Q8N6W0 485 aaKnown RBP19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 MAB21L3Q8N8X9 362 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 FAM3CQ92520 227 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 C8orf48Q96LL4 319 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 GCNAQ96QF7 691 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 SLC22A12Q96S37 553 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 MMS19Q96T76 1030 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 KIF9Q9HAQ2 790 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 HPS4Q9NQG7 708 aa19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 MAGEC2Q9UBF1 373 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 MRPS17Q9Y2R5 130 aaKnown RBP19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 R3HCC1Q9Y3T6 440 aaKnown RBP19.2■□□□□ 0.66
TRAPPC3-202ENST00000373162 OTOGLQ3ZCN5 2332 aa19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 ZNF292O60281 2723 aa19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 EP300Q09472 2414 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 TULP1O00294 542 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 IKBKBO14920 756 aa19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 ASS1P00966 412 aaKnown RBP19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 TCF3P15923 654 aa19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 PTPN1P18031 435 aaKnown RBP19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 GNL1P36915 607 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 SOX9P48436 509 aa19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 TNNC1P63316 161 aa19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 PLCB2Q00722 1185 aa19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 USP4Q13107 963 aa19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 COBLL1Q53SF7 1204 aa19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 MDH1BQ5I0G3 518 aa19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 PAQR9Q6ZVX9 377 aa19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 ELMO3Q96BJ8 720 aa19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 C8orf33Q9H7E9 229 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 GTSE1Q9NYZ3 720 aa19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 MAGED2Q9UNF1 606 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC3-202ENST00000373162 OTOL1A6NHN0 477 aaPredicted RBP19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 SPECC1L-ADORA2AF8WAN1 911 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 OLFM2O95897 454 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 CCNE1P24864 410 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 CDH8P55286 799 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 NOP14P78316 857 aaKnown RBP19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 TNK2Q07912 1038 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 MTAPQ13126 283 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 TRPC3Q13507 836 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 ZNF77Q15935 545 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 TAF12Q16514 161 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 ZNF699Q32M78 642 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 SCN4BQ8IWT1 228 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 ZC3H3Q8IXZ2 948 aaKnown RBP19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 ZBTB44Q8NCP5 570 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 B3GALNT2Q8NCR0 500 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 OR6B3Q8NGW1 331 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 MRPS31Q92665 395 aaKnown RBP19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 NKD2Q969F2 451 aaPredicted RBP19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 IER2Q9BTL4 223 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 B3GNT5Q9BYG0 378 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 ZNF518BQ9C0D4 1074 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 TDP1Q9NUW8 608 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 NXF1Q9UBU9 619 aaKnown RBP19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 R4GN57 208 aa19.18■□□□□ 0.66
TRAPPC3-202ENST00000373162 F8VP50 259 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 NCAM2O15394 837 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 CALUO43852 315 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 NR2F2P24468 414 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 ASPAP45381 313 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 RAP1GAPP47736 663 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 NUCB2P80303 420 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 PPP3CAQ08209 521 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 BIRC3Q13489 604 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 BECN1Q14457 450 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 ZNF667Q5HYK9 610 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 C1orf228Q6PIY5 440 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 DENND5BQ6ZUT9 1274 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 RALGPS2Q86X27 583 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 YAF2Q8IY57 180 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 SNX25Q9H3E2 840 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 SEMA4AQ9H3S1 761 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 SPATA6Q9NWH7 488 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 NDRG2Q9UN36 371 aaKnown RBP19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 MAPK8IP1Q9UQF2 711 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 GPR179Q6PRD1 2367 aa19.17■□□□□ 0.66
TRAPPC3-202ENST00000373162 CACNA1AO00555 2505 aa19.16■□□□□ 0.66
TRAPPC3-202ENST00000373162 C2orf78A6NCI8 922 aa19.16■□□□□ 0.66
TRAPPC3-202ENST00000373162 CLDN5O00501 218 aa19.16■□□□□ 0.66
TRAPPC3-202ENST00000373162 DPYSL4O14531 572 aa19.16■□□□□ 0.66
TRAPPC3-202ENST00000373162 TRIM66O15016 1216 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms