RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 PAQR9Q6ZVX9 377 aa18.22■□□□□ 0.51
BRCC3-202ENST00000340647 MON1AQ86VX9 555 aa18.22■□□□□ 0.51
BRCC3-202ENST00000340647 SPATA2LQ8IUW3 424 aaPredicted RBP18.22■□□□□ 0.51
BRCC3-202ENST00000340647 FMR1NBQ8N0W7 255 aaPredicted RBP18.22■□□□□ 0.51
BRCC3-202ENST00000340647 ENGASEQ8NFI3 743 aa18.22■□□□□ 0.51
BRCC3-202ENST00000340647 TTC8Q8TAM2 541 aa18.22■□□□□ 0.51
BRCC3-202ENST00000340647 GOLGA5Q8TBA6 731 aa18.22■□□□□ 0.51
BRCC3-202ENST00000340647 BPIFB1Q8TDL5 484 aa18.22■□□□□ 0.51
BRCC3-202ENST00000340647 SMYD3Q9H7B4 428 aa18.22■□□□□ 0.51
BRCC3-202ENST00000340647 HPS4Q9NQG7 708 aa18.22■□□□□ 0.51
BRCC3-202ENST00000340647 GCNT4Q9P109 453 aa18.22■□□□□ 0.51
BRCC3-202ENST00000340647 NDRG2Q9UN36 371 aaKnown RBP18.22■□□□□ 0.51
BRCC3-202ENST00000340647 AKAP3O75969 853 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 ATICP31939 592 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 RAP1GAPP47736 663 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 RPL10AP62906 217 aaKnown RBP18.21■□□□□ 0.51
BRCC3-202ENST00000340647 MTAPQ13126 283 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 KCNB1Q14721 858 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 NFIL3Q16649 462 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 ZACNQ401N2 412 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 MDH1BQ5I0G3 518 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 SCN4BQ8IWT1 228 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 FAM3CQ92520 227 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 CYP2S1Q96SQ9 504 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 B3GNT5Q9BYG0 378 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 BCO2Q9BYV7 579 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 CHRDQ9H2X0 955 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 C2orf42Q9NWW7 574 aa18.21■□□□□ 0.51
BRCC3-202ENST00000340647 MAGEC2Q9UBF1 373 aaPredicted RBP18.21■□□□□ 0.51
BRCC3-202ENST00000340647 NXF1Q9UBU9 619 aaKnown RBP18.21■□□□□ 0.51
BRCC3-202ENST00000340647 EP300Q09472 2414 aaPredicted RBP18.21■□□□□ 0.51
BRCC3-202ENST00000340647 GPR179Q6PRD1 2367 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 CACNA1AO00555 2505 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 C2orf78A6NCI8 922 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 CLDN5O00501 218 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 MAN2B1O00754 1011 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 PTPN1P18031 435 aaKnown RBP18.2■□□□□ 0.5
BRCC3-202ENST00000340647 HOXC13P31276 330 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 CTHP32929 405 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 NCOA4Q13772 614 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 ARHGAP29Q52LW3 1261 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 TRIM68Q6AZZ1 485 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 TSSK4Q6SA08 328 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 VSTM1Q6UX27 236 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 SV2AQ7L0J3 742 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 SMYD4Q8IYR2 804 aaPredicted RBP18.2■□□□□ 0.5
BRCC3-202ENST00000340647 CELF5Q8N6W0 485 aaKnown RBP18.2■□□□□ 0.5
BRCC3-202ENST00000340647 OR6B3Q8NGW1 331 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 TMC2Q8TDI7 906 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 SPATA17Q96L03 361 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 TTLL2Q9BWV7 592 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 ZNF518BQ9C0D4 1074 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 LMAN1LQ9HAT1 526 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 PRMT8Q9NR22 394 aaPredicted RBP18.2■□□□□ 0.5
BRCC3-202ENST00000340647 RBM12Q9NTZ6 932 aaKnown RBP18.2■□□□□ 0.5
BRCC3-202ENST00000340647 SPATA6Q9NWH7 488 aaPredicted RBP18.2■□□□□ 0.5
BRCC3-202ENST00000340647 ATP6V1DQ9Y5K8 247 aa18.2■□□□□ 0.5
BRCC3-202ENST00000340647 SOBPA7XYQ1 873 aa18.19■□□□□ 0.5
BRCC3-202ENST00000340647 SPECC1L-ADORA2AF8WAN1 911 aa18.19■□□□□ 0.5
BRCC3-202ENST00000340647 DDX6P26196 483 aaKnown RBP eCLIP18.19■□□□□ 0.5
BRCC3-202ENST00000340647 CYP27A1Q02318 531 aa18.19■□□□□ 0.5
BRCC3-202ENST00000340647 PPP3CAQ08209 521 aa18.19■□□□□ 0.5
BRCC3-202ENST00000340647 PNOCQ13519 176 aa18.19■□□□□ 0.5
BRCC3-202ENST00000340647 TAF12Q16514 161 aa18.19■□□□□ 0.5
BRCC3-202ENST00000340647 SPOPLQ6IQ16 392 aa18.19■□□□□ 0.5
BRCC3-202ENST00000340647 MAMSTRQ6ZN01 415 aa18.19■□□□□ 0.5
BRCC3-202ENST00000340647 C4orf50Q6ZRC1 276 aa18.19■□□□□ 0.5
BRCC3-202ENST00000340647 GUF1Q8N442 669 aaKnown RBP18.19■□□□□ 0.5
BRCC3-202ENST00000340647 SYAP1Q96A49 352 aaPredicted RBP18.19■□□□□ 0.5
BRCC3-202ENST00000340647 GKN1Q9NS71 199 aa18.19■□□□□ 0.5
BRCC3-202ENST00000340647 TDP1Q9NUW8 608 aa18.19■□□□□ 0.5
BRCC3-202ENST00000340647 HMGXB4Q9UGU5 601 aa18.19■□□□□ 0.5
BRCC3-202ENST00000340647 FBXO4Q9UKT5 387 aa18.19■□□□□ 0.5
BRCC3-202ENST00000340647 EML5Q05BV3 1969 aa18.19■□□□□ 0.5
BRCC3-202ENST00000340647 F8VP50 259 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 MAPK13O15264 365 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 MAGEA9P43362 315 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 ID4P47928 161 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 TNNC1P63316 161 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 TRPC3Q13507 836 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 ZNF268Q14587 947 aaPredicted RBP18.18■□□□□ 0.5
BRCC3-202ENST00000340647 ZNF77Q15935 545 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 ZNF528Q3MIS6 628 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 CEP135Q66GS9 1140 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 ERMP1Q7Z2K6 904 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 YAF2Q8IY57 180 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 SUMF1Q8NBK3 374 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 B3GALNT2Q8NCR0 500 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 ERCC4Q92889 916 aaPredicted RBP18.18■□□□□ 0.5
BRCC3-202ENST00000340647 C8orf48Q96LL4 319 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 GCNAQ96QF7 691 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 SNX25Q9H3E2 840 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 APOBEC3GQ9HC16 384 aaKnown RBP18.18■□□□□ 0.5
BRCC3-202ENST00000340647 ZMYM5Q9UJ78 669 aa18.18■□□□□ 0.5
BRCC3-202ENST00000340647 MRPS17Q9Y2R5 130 aaKnown RBP18.18■□□□□ 0.5
BRCC3-202ENST00000340647 R3HCC1Q9Y3T6 440 aaKnown RBP18.18■□□□□ 0.5
BRCC3-202ENST00000340647 A8MXQ7 604 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 DPYSL4O14531 572 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 IKBKBO14920 756 aa18.17■□□□□ 0.5
BRCC3-202ENST00000340647 ASS1P00966 412 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms