RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ARL14EPQ8N8R7 260 aaPredicted RBP20.78■□□□□ 0.92
ITGA4-202ENST00000339307 KBTBD7Q8WVZ9 684 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 MAGEF1Q9HAY2 307 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 DUS2Q9NX74 493 aaKnown RBP20.78■□□□□ 0.92
ITGA4-202ENST00000339307 PCDHA7Q9UN72 937 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 OTOGLQ3ZCN5 2332 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 OTOL1A6NHN0 477 aaPredicted RBP20.78■□□□□ 0.92
ITGA4-202ENST00000339307 SOBPA7XYQ1 873 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 HRO43593 1189 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 PHACTR2O75167 634 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 TADA3O75528 432 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 CST3P01034 146 aaPredicted RBP20.78■□□□□ 0.92
ITGA4-202ENST00000339307 WARSP23381 471 aaKnown RBP20.78■□□□□ 0.92
ITGA4-202ENST00000339307 GNL1P36915 607 aaPredicted RBP20.78■□□□□ 0.92
ITGA4-202ENST00000339307 IFNAR2P48551 515 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 FAM160A1Q05DH4 1040 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 CYP24A1Q07973 514 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 KCNB1Q14721 858 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 MTF1Q14872 753 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 PDGFRLQ15198 375 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 MDH1BQ5I0G3 518 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 LAIR1Q6GTX8 287 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 SCFD1Q8WVM8 642 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 MYRFLQ96LU7 910 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 SLC22A12Q96S37 553 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 CGRRF1Q99675 332 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 MRPL45Q9BRJ2 306 aaKnown RBP20.78■□□□□ 0.92
ITGA4-202ENST00000339307 CRTAC1Q9NQ79 661 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 K7ESF4 209 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 EXOC3O60645 756 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 ABL1P00519 1130 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 HOXC13P31276 330 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 MAGEA11P43364 429 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 LMNB2Q03252 620 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 CUL4BQ13620 913 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 ZNF268Q14587 947 aaPredicted RBP20.77■□□□□ 0.91
ITGA4-202ENST00000339307 PSMD6Q15008 389 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 WDR72Q3MJ13 1102 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 GRAMD1CQ8IYS0 662 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 CPA6Q8N4T0 437 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 RIN3Q8TB24 985 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 NXF1Q9UBU9 619 aaKnown RBP20.77■□□□□ 0.91
ITGA4-202ENST00000339307 CDV3Q9UKY7 258 aaKnown RBP20.77■□□□□ 0.91
ITGA4-202ENST00000339307 CFAP45Q9UL16 551 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 SLC8A2Q9UPR5 921 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 WNT6Q9Y6F9 365 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 UBE4BO95155 1302 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 DENND4CQ5VZ89 1909 aa20.77■□□□□ 0.91
ITGA4-202ENST00000339307 WDR87Q6ZQQ6 2873 aa20.76■□□□□ 0.91
ITGA4-202ENST00000339307 ZNF292O60281 2723 aa20.76■□□□□ 0.91
ITGA4-202ENST00000339307 C2orf78A6NCI8 922 aa20.76■□□□□ 0.91
ITGA4-202ENST00000339307 PDIA4P13667 645 aaKnown RBP20.76■□□□□ 0.91
ITGA4-202ENST00000339307 HDCP19113 662 aa20.76■□□□□ 0.91
ITGA4-202ENST00000339307 PXNP49023 591 aaPredicted RBP20.76■□□□□ 0.91
ITGA4-202ENST00000339307 GALK1P51570 392 aa20.76■□□□□ 0.91
ITGA4-202ENST00000339307 PSMD2Q13200 908 aa20.76■□□□□ 0.91
ITGA4-202ENST00000339307 TMEM196Q5HYL7 178 aa20.76■□□□□ 0.91
ITGA4-202ENST00000339307 FSTL4Q6MZW2 842 aa20.76■□□□□ 0.91
ITGA4-202ENST00000339307 CNNM4Q6P4Q7 775 aa20.76■□□□□ 0.91
ITGA4-202ENST00000339307 VSTM1Q6UX27 236 aa20.76■□□□□ 0.91
ITGA4-202ENST00000339307 EXOC4Q96A65 974 aa20.76■□□□□ 0.91
ITGA4-202ENST00000339307 PCED1BQ96HM7 432 aa20.76■□□□□ 0.91
ITGA4-202ENST00000339307 GPR179Q6PRD1 2367 aa20.76■□□□□ 0.91
ITGA4-202ENST00000339307 OBSL1O75147 1896 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 ATG13O75143 517 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 EGFP01133 1207 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 SDHBP21912 280 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 CNR2P34972 360 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 SNRPFP62306 86 aaKnown RBP20.75■□□□□ 0.91
ITGA4-202ENST00000339307 DNM1Q05193 864 aaKnown RBP20.75■□□□□ 0.91
ITGA4-202ENST00000339307 IFRD2Q12894 506 aaPredicted RBP20.75■□□□□ 0.91
ITGA4-202ENST00000339307 BIRC3Q13489 604 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 RESP18Q5W5W9 173 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 PKN3Q6P5Z2 889 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 DENND5BQ6ZUT9 1274 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 MYCBPAPQ8TBZ2 947 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 SH3RF2Q8TEC5 729 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 OSCP1Q8WVF1 389 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 CHFRQ96EP1 664 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 P2RY13Q9BPV8 354 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 ECT2Q9H8V3 914 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 PARD6AQ9NPB6 346 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 DLL3Q9NYJ7 618 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 TRPM5Q9NZQ8 1165 aa20.75■□□□□ 0.91
ITGA4-202ENST00000339307 PVALEFA0A1B0GWK0 134 aa20.74■□□□□ 0.91
ITGA4-202ENST00000339307 MED19A0JLT2 244 aaPredicted RBP20.74■□□□□ 0.91
ITGA4-202ENST00000339307 A8MXQ7 604 aa20.74■□□□□ 0.91
ITGA4-202ENST00000339307 PRR5-ARHGAP8B1AHC4 643 aa20.74■□□□□ 0.91
ITGA4-202ENST00000339307 TRDMT1O14717 391 aaKnown RBP20.74■□□□□ 0.91
ITGA4-202ENST00000339307 TRIM66O15016 1216 aa20.74■□□□□ 0.91
ITGA4-202ENST00000339307 RNF40O75150 1001 aa20.74■□□□□ 0.91
ITGA4-202ENST00000339307 PAPSS2O95340 614 aaPredicted RBP20.74■□□□□ 0.91
ITGA4-202ENST00000339307 RETP07949 1114 aa20.74■□□□□ 0.91
ITGA4-202ENST00000339307 GJA4P35212 333 aa20.74■□□□□ 0.91
ITGA4-202ENST00000339307 MYL6P60660 151 aa20.74■□□□□ 0.91
ITGA4-202ENST00000339307 ARHGAP8P85298 464 aa20.74■□□□□ 0.91
ITGA4-202ENST00000339307 KNOP1Q1ED39 458 aaKnown RBP20.74■□□□□ 0.91
ITGA4-202ENST00000339307 LIMS2Q7Z4I7 341 aa20.74■□□□□ 0.91
ITGA4-202ENST00000339307 ATP2A3Q93084 1043 aa20.74■□□□□ 0.91
ITGA4-202ENST00000339307 SPATA17Q96L03 361 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms