RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 C12orf29Q8N999 325 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 ELSPBP1Q96BH3 223 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 C8orf48Q96LL4 319 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 GCNAQ96QF7 691 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 ARID3AQ99856 593 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 MED10Q9BTT4 135 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 ELOVL4Q9GZR5 314 aa19.11■□□□□ 0.65
SNRPA1-201ENST00000254193 NOTCH4Q99466 2003 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 FGFR1OPO95684 399 aaKnown RBP19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 CCDC130P13994 396 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 LRMPQ12912 555 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 BMP8AQ7Z5Y6 402 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 FAM35AQ86V20 835 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 ARID3BQ8IVW6 561 aaPredicted RBP19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 FUKQ8N0W3 1084 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 WHAMMQ8TF30 809 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 RSPRY1Q96DX4 576 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 SPATA17Q96L03 361 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 MYRFLQ96LU7 910 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 NT5C1AQ9BXI3 368 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 SLC46A2Q9BY10 475 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 TASP1Q9H6P5 420 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 TRPV4Q9HBA0 871 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 FAM49BQ9NUQ9 324 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 TECTAO75443 2155 aa19.1■□□□□ 0.65
SNRPA1-201ENST00000254193 TRIM66O15016 1216 aa19.09■□□□□ 0.65
SNRPA1-201ENST00000254193 CILPO75339 1184 aa19.09■□□□□ 0.65
SNRPA1-201ENST00000254193 MARSP56192 900 aaKnown RBP19.09■□□□□ 0.65
SNRPA1-201ENST00000254193 USP46P62068 366 aa19.09■□□□□ 0.65
SNRPA1-201ENST00000254193 GRM2Q14416 872 aa19.09■□□□□ 0.65
SNRPA1-201ENST00000254193 CREBRFQ8IUR6 639 aa19.09■□□□□ 0.65
SNRPA1-201ENST00000254193 SIX5Q8N196 739 aa19.09■□□□□ 0.65
SNRPA1-201ENST00000254193 SLC2A14Q8TDB8 520 aa19.09■□□□□ 0.65
SNRPA1-201ENST00000254193 TRMT2BQ96GJ1 504 aaKnown RBP19.09■□□□□ 0.65
SNRPA1-201ENST00000254193 KCNK16Q96T55 309 aa19.09■□□□□ 0.65
SNRPA1-201ENST00000254193 SLC2A4RGQ9NR83 387 aa19.09■□□□□ 0.65
SNRPA1-201ENST00000254193 CISHQ9NSE2 258 aa19.09■□□□□ 0.65
SNRPA1-201ENST00000254193 UXTQ9UBK9 157 aaPredicted RBP19.09■□□□□ 0.65
SNRPA1-201ENST00000254193 CA14Q9ULX7 337 aa19.09■□□□□ 0.65
SNRPA1-201ENST00000254193 NCANO14594 1321 aa19.08■□□□□ 0.65
SNRPA1-201ENST00000254193 ATP8B3O60423 1300 aa19.08■□□□□ 0.65
SNRPA1-201ENST00000254193 TADA3O75528 432 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 CCDC192P0DO97 292 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 KCNH2Q12809 1159 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 ZNF394Q53GI3 561 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 IER5LQ5T953 404 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 TXNDC8Q6A555 127 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 VITQ6UXI7 678 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 DENND5BQ6ZUT9 1274 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 FBXL6Q8N531 539 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 MAB21L3Q8N8X9 362 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 MRPS31Q92665 395 aaKnown RBP19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 FAXDC2Q96IV6 333 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 SMG9Q9H0W8 520 aaKnown RBP19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 KRT82Q9NSB4 513 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 WNT16Q9UBV4 365 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 RAPGEFL1Q9UHV5 662 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 DOCK8Q8NF50 2099 aa19.08■□□□□ 0.64
SNRPA1-201ENST00000254193 KRBA1A5PL33 1030 aa19.07■□□□□ 0.64
SNRPA1-201ENST00000254193 HEPACAM2A8MVW5 462 aa19.07■□□□□ 0.64
SNRPA1-201ENST00000254193 PMM2O15305 246 aa19.07■□□□□ 0.64
SNRPA1-201ENST00000254193 AP1G2O75843 785 aa19.07■□□□□ 0.64
SNRPA1-201ENST00000254193 ADORA2BP29275 332 aa19.07■□□□□ 0.64
SNRPA1-201ENST00000254193 CUL2Q13617 745 aa19.07■□□□□ 0.64
SNRPA1-201ENST00000254193 IRF2BP1Q8IU81 584 aa19.07■□□□□ 0.64
SNRPA1-201ENST00000254193 SMARCD1Q96GM5 515 aa19.07■□□□□ 0.64
SNRPA1-201ENST00000254193 CNOT6LQ96LI5 555 aaKnown RBP19.07■□□□□ 0.64
SNRPA1-201ENST00000254193 CEP295NLQ96MC4 621 aa19.07■□□□□ 0.64
SNRPA1-201ENST00000254193 LRRC3BQ96PB8 259 aa19.07■□□□□ 0.64
SNRPA1-201ENST00000254193 MFSD1Q9H3U5 465 aa19.07■□□□□ 0.64
SNRPA1-201ENST00000254193 PRAMEF12O95522 483 aa19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 AFPP02771 609 aaKnown RBP19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 PSMC3P17980 439 aa19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 COL9A1P20849 921 aa19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 CETN1Q12798 172 aa19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 IFRD2Q12894 506 aaPredicted RBP19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 TPD52L1Q16890 204 aaPredicted RBP19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 RBM43Q6ZSC3 357 aaKnown RBP19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 MON1AQ86VX9 555 aa19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 SUGP1Q8IWZ8 645 aaKnown RBP19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 CMTM8Q8IZV2 173 aa19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 LMO3Q8TAP4 145 aa19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 CYFIP2Q96F07 1278 aa19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 HEXIM2Q96MH2 286 aaKnown RBP19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 SMOQ99835 787 aa19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 TRMT61BQ9BVS5 477 aaKnown RBP19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 TTLL2Q9BWV7 592 aa19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 TRPC7Q9HCX4 862 aa19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 DMAP1Q9NPF5 467 aaPredicted RBP19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 DACH1Q9UI36 760 aa19.06■□□□□ 0.64
SNRPA1-201ENST00000254193 DPYSL4O14531 572 aa19.05■□□□□ 0.64
SNRPA1-201ENST00000254193 P4HA2O15460 535 aa19.05■□□□□ 0.64
SNRPA1-201ENST00000254193 BEST1O76090 585 aa19.05■□□□□ 0.64
SNRPA1-201ENST00000254193 MBD3O95983 291 aa19.05■□□□□ 0.64
SNRPA1-201ENST00000254193 NPR3P17342 541 aa19.05■□□□□ 0.64
SNRPA1-201ENST00000254193 TRIM21P19474 475 aaKnown RBP19.05■□□□□ 0.64
SNRPA1-201ENST00000254193 DDX6P26196 483 aaKnown RBP eCLIP19.05■□□□□ 0.64
SNRPA1-201ENST00000254193 ERCC5P28715 1186 aaPredicted RBP19.05■□□□□ 0.64
SNRPA1-201ENST00000254193 RAD23BP54727 409 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms