RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	FIT1	Q04433	528 aa		0.96	□□□□□ -2.26
PKR1	YMR123W	YMR252C	Q04814	134 aa		0.96	□□□□□ -2.26
PKR1	YMR123W	YPD1	Q07688	167 aa		0.96	□□□□□ -2.26
PKR1	YMR123W	PST2	Q12335	198 aa	Known RBP	0.96	□□□□□ -2.26
PKR1	YMR123W	YOR192C-C	Q3E736	78 aa		0.96	□□□□□ -2.26
PKR1	YMR123W	ATP15	P21306	62 aa		0.95	□□□□□ -2.26
PKR1	YMR123W	IDP1	P21954	428 aa	Known RBP	0.95	□□□□□ -2.26
PKR1	YMR123W	CPR5	P35176	225 aa		0.95	□□□□□ -2.26
PKR1	YMR123W	MRPL28	P36527	147 aa		0.95	□□□□□ -2.26
PKR1	YMR123W	UMP1	P38293	148 aa		0.95	□□□□□ -2.26
PKR1	YMR123W	VMA22	P38784	181 aa		0.95	□□□□□ -2.26
PKR1	YMR123W	MPC2	P38857	129 aa		0.95	□□□□□ -2.26
PKR1	YMR123W	YER137C	P40083	148 aa	Known RBP	0.95	□□□□□ -2.26
PKR1	YMR123W	GVP36	P40531	326 aa	Known RBP	0.95	□□□□□ -2.26
PKR1	YMR123W	GNA1	P43577	159 aa	Predicted RBP	0.95	□□□□□ -2.26
PKR1	YMR123W	SOL1	P50278	321 aa		0.95	□□□□□ -2.26
PKR1	YMR123W	COG5	P53951	403 aa		0.95	□□□□□ -2.26
PKR1	YMR123W	YMR099C	Q03161	297 aa	Known RBP	0.95	□□□□□ -2.26
PKR1	YMR123W	NMA1	Q06178	401 aa	Known RBP	0.95	□□□□□ -2.26
PKR1	YMR123W	YOL118C	Q08259	102 aa		0.95	□□□□□ -2.26
PKR1	YMR123W	TSC3	Q3E790	80 aa		0.95	□□□□□ -2.26
PKR1	YMR123W	YOS1	Q3E834	85 aa		0.95	□□□□□ -2.26
PKR1	YMR123W	TAR1	Q8TGM6	124 aa		0.95	□□□□□ -2.26
PKR1	YMR123W	ROX3	P25046	220 aa		0.94	□□□□□ -2.26
PKR1	YMR123W	YCR101C	P25607	182 aa		0.94	□□□□□ -2.26
PKR1	YMR123W	OCH1	P31755	480 aa		0.94	□□□□□ -2.26
PKR1	YMR123W	ARO7	P32178	256 aa		0.94	□□□□□ -2.26
PKR1	YMR123W	SNC2	P33328	115 aa		0.94	□□□□□ -2.26
PKR1	YMR123W	MRPL38	P35996	138 aa	Predicted RBP	0.94	□□□□□ -2.26
PKR1	YMR123W	PAU24	P38155	120 aa		0.94	□□□□□ -2.26
PKR1	YMR123W	IKI1	P38874	309 aa		0.94	□□□□□ -2.26
PKR1	YMR123W	CCS1	P40202	249 aa	Known RBP	0.94	□□□□□ -2.26
PKR1	YMR123W	IRC18	P47056	224 aa		0.94	□□□□□ -2.26
PKR1	YMR123W	PAU12	P53343	120 aa		0.94	□□□□□ -2.26
PKR1	YMR123W	GRX5	Q02784	150 aa		0.94	□□□□□ -2.26
PKR1	YMR123W	GRX3	Q03835	250 aa		0.94	□□□□□ -2.26
PKR1	YMR123W	IRC23	Q08416	157 aa		0.94	□□□□□ -2.26
PKR1	YMR123W	DGK1	Q12382	290 aa		0.94	□□□□□ -2.26
PKR1	YMR123W	HTB1	P02293	131 aa	Known RBP	0.93	□□□□□ -2.26
PKR1	YMR123W	HTB2	P02294	131 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	VAR1	P02381	398 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	COX9	P07255	59 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	RPB3	P16370	318 aa	Known RBP	0.93	□□□□□ -2.26
PKR1	YMR123W	BUD23	P25627	275 aa	Predicted RBP	0.93	□□□□□ -2.26
PKR1	YMR123W	PAU2	P32612	120 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	YPT31	P38555	223 aa	Known RBP	0.93	□□□□□ -2.26
PKR1	YMR123W	RFC2	P40348	353 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	GAT4	P40569	121 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	AIM25	P47140	327 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	YGL204C	P53089	101 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	MPC3	P53311	146 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	COX12	Q01519	83 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	YML108W	Q03759	105 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	SPC24	Q04477	213 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	ANT1	Q06497	328 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	FSF1	Q12029	327 aa	Known RBP	0.93	□□□□□ -2.26
PKR1	YMR123W	YPR013C	Q12145	317 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	YLR099W-A	Q3E798	87 aa		0.93	□□□□□ -2.26
PKR1	YMR123W	QCR8	P08525	94 aa		0.92	□□□□□ -2.26
PKR1	YMR123W	RPL27A	P0C2H6	136 aa	Known RBP	0.92	□□□□□ -2.26
PKR1	YMR123W	SEN2	P16658	377 aa		0.92	□□□□□ -2.26
PKR1	YMR123W	BET1	P22804	142 aa		0.92	□□□□□ -2.26
PKR1	YMR123W	RPB7	P34087	171 aa		0.92	□□□□□ -2.26
PKR1	YMR123W	SFK1	P35735	353 aa		0.92	□□□□□ -2.26
PKR1	YMR123W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.92	□□□□□ -2.26	not detected
PKR1	YMR123W	FMP23	P38231	175 aa		0.92	□□□□□ -2.26
PKR1	YMR123W	EGD2	P38879	174 aa	Known RBP	0.92	□□□□□ -2.26
PKR1	YMR123W	SNU13	P39990	126 aa	Known RBP	0.92	□□□□□ -2.26
PKR1	YMR123W	LST8	P41318	303 aa		0.92	□□□□□ -2.26
PKR1	YMR123W	YFR035C	P43608	114 aa		0.92	□□□□□ -2.26
PKR1	YMR123W	GPI14	P47088	403 aa	Known RBP	0.92	□□□□□ -2.26
PKR1	YMR123W	TDA4	P47153	279 aa		0.92	□□□□□ -2.26
PKR1	YMR123W	DIE2	P50076	525 aa		0.92	□□□□□ -2.26
PKR1	YMR123W	POP3	P53833	195 aa	Predicted RBP	0.92	□□□□□ -2.26
PKR1	YMR123W	HNT1	Q04344	158 aa	Known RBP	0.92	□□□□□ -2.26
PKR1	YMR123W	ODC2	Q99297	307 aa		0.92	□□□□□ -2.26
PKR1	YMR123W	YLR236C	A0A023PZG4	107 aa		0.91	□□□□□ -2.26
PKR1	YMR123W	PET54	P10834	293 aa		0.91	□□□□□ -2.26
PKR1	YMR123W	AHC2	P25649	128 aa		0.91	□□□□□ -2.26
PKR1	YMR123W	RRT1	P38192	103 aa		0.91	□□□□□ -2.26
PKR1	YMR123W	YHR138C	P38841	114 aa	Predicted RBP	0.91	□□□□□ -2.26
PKR1	YMR123W	NVJ1	P38881	321 aa		0.91	□□□□□ -2.26
PKR1	YMR123W	YJL218W	P40892	196 aa	Known RBP	0.91	□□□□□ -2.26
PKR1	YMR123W	KNH1	P50112	268 aa		0.91	□□□□□ -2.26
PKR1	YMR123W	YGR042W	P53227	271 aa		0.91	□□□□□ -2.26
PKR1	YMR123W	TLG1	Q03322	224 aa		0.91	□□□□□ -2.26
PKR1	YMR123W	MAK3	Q03503	176 aa		0.91	□□□□□ -2.26
PKR1	YMR123W	YPL225W	Q08971	146 aa	Known RBP	0.91	□□□□□ -2.26
PKR1	YMR123W	YPR108W-A	Q3E7B3	70 aa		0.91	□□□□□ -2.26
PKR1	YMR123W	YOR011W-A	Q3E807	68 aa		0.91	□□□□□ -2.26
PKR1	YMR123W	HUG1	Q6Q5K6	68 aa		0.91	□□□□□ -2.26
PKR1	YMR123W	QCR7	P00128	127 aa		0.9	□□□□□ -2.27
PKR1	YMR123W	URA5	P13298	226 aa	Known RBP	0.9	□□□□□ -2.27
PKR1	YMR123W	ANB1	P19211	157 aa		0.9	□□□□□ -2.27
PKR1	YMR123W	YCR001W	P25347	104 aa		0.9	□□□□□ -2.27
PKR1	YMR123W	YER076C	P40049	302 aa		0.9	□□□□□ -2.27
PKR1	YMR123W	PDS1	P40316	373 aa	Predicted RBP	0.9	□□□□□ -2.27
PKR1	YMR123W	POR2	P40478	281 aa		0.9	□□□□□ -2.27
PKR1	YMR123W	ARO8	P53090	500 aa	Known RBP	0.9	□□□□□ -2.27
PKR1	YMR123W	UBC7	Q02159	165 aa		0.9	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms