RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W YHR140WP38842 239 aa2.81□□□□□ -1.96
LCB5YLR260W GPI2P46961 280 aa2.81□□□□□ -1.96
LCB5YLR260W SAY1P53324 424 aa2.81□□□□□ -1.96
LCB5YLR260W APJ1P53940 528 aa2.81□□□□□ -1.96
LCB5YLR260W GRX5Q02784 150 aa2.81□□□□□ -1.96
LCB5YLR260W YLR042CQ07990 161 aa2.81□□□□□ -1.96
LCB5YLR260W RAD28Q12021 506 aa2.81□□□□□ -1.96
LCB5YLR260W ARO2P28777 376 aaKnown RBP2.81□□□□□ -1.96
LCB5YLR260W CLB6P32943 380 aa2.81□□□□□ -1.96
LCB5YLR260W FLO5P38894 1075 aa2.81□□□□□ -1.96
LCB5YLR260W YIR020CP40575 100 aa2.81□□□□□ -1.96
LCB5YLR260W SKI6P46948 246 aaPredicted RBP2.81□□□□□ -1.96
LCB5YLR260W SWT21P53873 357 aaPredicted RBP2.81□□□□□ -1.96
LCB5YLR260W ELC1Q03071 99 aa2.81□□□□□ -1.96
LCB5YLR260W ISD11Q6Q560 94 aa2.81□□□□□ -1.96
LCB5YLR260W ATP5P09457 212 aa2.8□□□□□ -1.96
LCB5YLR260W ERG2P32352 222 aa2.8□□□□□ -1.96
LCB5YLR260W SHB17P36136 271 aaKnown RBP2.8□□□□□ -1.96
LCB5YLR260W FLX1P40464 311 aa2.8□□□□□ -1.96
LCB5YLR260W BNS1P50084 137 aa2.8□□□□□ -1.96
LCB5YLR260W WSC2P53832 503 aa2.8□□□□□ -1.96
LCB5YLR260W YMR254CQ04838 102 aa2.8□□□□□ -1.96
LCB5YLR260W SCW10Q04951 389 aa2.8□□□□□ -1.96
LCB5YLR260W AYT1Q12226 474 aa2.8□□□□□ -1.96
LCB5YLR260W TIM22Q12328 207 aa2.8□□□□□ -1.96
LCB5YLR260W HTL1Q9URQ5 78 aa2.8□□□□□ -1.96
LCB5YLR260W MSA2P36157 363 aa2.8□□□□□ -1.96
LCB5YLR260W CTR2P38865 189 aa2.8□□□□□ -1.96
LCB5YLR260W YER181CP40097 107 aa2.8□□□□□ -1.96
LCB5YLR260W PRE5P40302 234 aaKnown RBP2.8□□□□□ -1.96
LCB5YLR260W YJL218WP40892 196 aaKnown RBP2.8□□□□□ -1.96
LCB5YLR260W TDA4P47153 279 aa2.8□□□□□ -1.96
LCB5YLR260W YGL230CP53074 147 aa2.8□□□□□ -1.96
LCB5YLR260W VPS28Q02767 242 aa2.8□□□□□ -1.96
LCB5YLR260W RPL39P04650 51 aa2.79□□□□□ -1.96
LCB5YLR260W YPR170W-BP0C5R9 85 aa2.79□□□□□ -1.96
LCB5YLR260W HYP2P23301 157 aaKnown RBP2.79□□□□□ -1.96
LCB5YLR260W EMP24P32803 203 aaKnown RBP2.79□□□□□ -1.96
LCB5YLR260W ZRT3P34240 503 aa2.79□□□□□ -1.96
LCB5YLR260W YIL024CP40543 189 aa2.79□□□□□ -1.96
LCB5YLR260W YGL262WP53054 175 aa2.79□□□□□ -1.96
LCB5YLR260W FCF1Q05498 189 aaPredicted RBP2.79□□□□□ -1.96
LCB5YLR260W FEX2Q08991 375 aa2.79□□□□□ -1.96
LCB5YLR260W YCL048W-AQ2V2Q2 79 aa2.79□□□□□ -1.96
LCB5YLR260W URA2P07259 2214 aaKnown RBP2.79□□□□□ -1.96
LCB5YLR260W RPL14AP36105 138 aaKnown RBP2.78□□□□□ -1.96
LCB5YLR260W SHE1P38200 338 aa2.78□□□□□ -1.96
LCB5YLR260W YBR090CP38253 122 aa2.78□□□□□ -1.96
LCB5YLR260W RPL14BP38754 138 aaKnown RBP2.78□□□□□ -1.96
LCB5YLR260W PAM16P42949 149 aa2.78□□□□□ -1.96
LCB5YLR260W YJL028WP47062 111 aa2.78□□□□□ -1.96
LCB5YLR260W CRH1P53301 507 aa2.78□□□□□ -1.96
LCB5YLR260W BUD25P85052 153 aa2.78□□□□□ -1.96
LCB5YLR260W YDR114CQ04597 100 aa2.78□□□□□ -1.96
LCB5YLR260W YML100W-AQ8TGT0 57 aa2.78□□□□□ -1.96
LCB5YLR260W RPS23AP0CX29 145 aaKnown RBP2.78□□□□□ -1.96
LCB5YLR260W RPS23BP0CX30 145 aa2.78□□□□□ -1.96
LCB5YLR260W YER190C-BP0CX94 160 aa2.78□□□□□ -1.96
LCB5YLR260W YEL077W-AP0CX95 160 aa2.78□□□□□ -1.96
LCB5YLR260W YGR296C-BP0CX96 160 aa2.78□□□□□ -1.96
LCB5YLR260W YPL283W-BP0CX97 160 aa2.78□□□□□ -1.96
LCB5YLR260W YPR204C-AP0CX98 160 aa2.78□□□□□ -1.96
LCB5YLR260W YFL068WP0CX99 160 aa2.78□□□□□ -1.96
LCB5YLR260W YLL066W-AP0CY00 160 aa2.78□□□□□ -1.96
LCB5YLR260W YLL067W-AP0CY01 160 aa2.78□□□□□ -1.96
LCB5YLR260W UBC5P15732 148 aa2.78□□□□□ -1.96
LCB5YLR260W RPB3P16370 318 aaKnown RBP2.78□□□□□ -1.96
LCB5YLR260W SRB6P32570 121 aa2.78□□□□□ -1.96
LCB5YLR260W VMA11P32842 164 aa2.78□□□□□ -1.96
LCB5YLR260W YRA2P36036 203 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
LCB5YLR260W IPT1P38954 527 aa2.78□□□□□ -1.96
LCB5YLR260W TIR3P40552 269 aa2.78□□□□□ -1.96
LCB5YLR260W RPR2P40571 144 aa2.78□□□□□ -1.96
LCB5YLR260W YGL193CP53097 103 aa2.78□□□□□ -1.96
LCB5YLR260W YMR244WQ04018 355 aa2.78□□□□□ -1.96
LCB5YLR260W GAL83Q04739 417 aa2.78□□□□□ -1.96
LCB5YLR260W CSI2Q08054 341 aa2.78□□□□□ -1.96
LCB5YLR260W YOL014WQ08110 124 aa2.78□□□□□ -1.96
LCB5YLR260W YOR020W-AQ3E824 90 aa2.78□□□□□ -1.96
LCB5YLR260W YEL009C-AA0A023PZF2 135 aa2.77□□□□□ -1.97
LCB5YLR260W CCW14O13547 238 aa2.77□□□□□ -1.97
LCB5YLR260W HPA3P39979 161 aa2.77□□□□□ -1.97
LCB5YLR260W YER188WP40103 239 aa2.77□□□□□ -1.97
LCB5YLR260W CCS1P40202 249 aaKnown RBP2.77□□□□□ -1.97
LCB5YLR260W ATG18P43601 500 aa2.77□□□□□ -1.97
LCB5YLR260W YPL067CQ02754 198 aa2.77□□□□□ -1.97
LCB5YLR260W UPS3Q04006 179 aa2.77□□□□□ -1.97
LCB5YLR260W SEN15Q04675 128 aa2.77□□□□□ -1.97
LCB5YLR260W NAT3Q06504 195 aa2.77□□□□□ -1.97
LCB5YLR260W HUT1Q12520 339 aa2.77□□□□□ -1.97
LCB5YLR260W RPL21BQ12672 160 aaKnown RBP2.77□□□□□ -1.97
LCB5YLR260W YLR412C-AQ3E742 68 aa2.77□□□□□ -1.97
LCB5YLR260W KTI11Q3E840 82 aa2.77□□□□□ -1.97
LCB5YLR260W MSW1P04803 379 aa2.77□□□□□ -1.97
LCB5YLR260W ANB1P19211 157 aa2.77□□□□□ -1.97
LCB5YLR260W COX10P21592 462 aa2.77□□□□□ -1.97
LCB5YLR260W BET1P22804 142 aa2.77□□□□□ -1.97
LCB5YLR260W YFL019CP43576 117 aa2.77□□□□□ -1.97
LCB5YLR260W ERG25P53045 309 aa2.77□□□□□ -1.97
LCB5YLR260W NMA1Q06178 401 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms