RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	YLR361C-A	Q3E795	98 aa		2.22	□□□□□ -2.05
RSA3	YLR221C	HAP2	P06774	265 aa		2.21	□□□□□ -2.06
RSA3	YLR221C	FUN14	P18411	198 aa		2.21	□□□□□ -2.06
RSA3	YLR221C	IRC21	Q04772	201 aa		2.21	□□□□□ -2.06
RSA3	YLR221C	YOR072W	Q08486	104 aa		2.21	□□□□□ -2.06
RSA3	YLR221C	HSL1	P34244	1518 aa		2.21	□□□□□ -2.06
RSA3	YLR221C	QCR10	P37299	77 aa		2.2	□□□□□ -2.06
RSA3	YLR221C	RPS20	P38701	121 aa	Known RBP	2.2	□□□□□ -2.06
RSA3	YLR221C	YPL067C	Q02754	198 aa		2.2	□□□□□ -2.06
RSA3	YLR221C	ANB1	P19211	157 aa		2.19	□□□□□ -2.06
RSA3	YLR221C	PRS3	P38689	320 aa	Known RBP	2.19	□□□□□ -2.06
RSA3	YLR221C	YGL149W	P53116	101 aa		2.19	□□□□□ -2.06
RSA3	YLR221C	CNL1	Q06333	122 aa		2.19	□□□□□ -2.06
RSA3	YLR221C	YAL064W	P39711	94 aa		2.18	□□□□□ -2.06
RSA3	YLR221C	YMR122C	Q03879	124 aa		2.18	□□□□□ -2.06
RSA3	YLR221C	KTI11	Q3E840	82 aa		2.18	□□□□□ -2.06
RSA3	YLR221C	HYM1	P32464	399 aa		2.17	□□□□□ -2.06
RSA3	YLR221C	BRP1	P53194	125 aa		2.17	□□□□□ -2.06
RSA3	YLR221C	TIM8	P57744	87 aa		2.17	□□□□□ -2.06
RSA3	YLR221C	TVP18	Q04767	167 aa		2.17	□□□□□ -2.06
RSA3	YLR221C	YHR213W	P0CI67	198 aa		2.16	□□□□□ -2.06
RSA3	YLR221C	PHS1	P40857	217 aa		2.16	□□□□□ -2.06
RSA3	YLR221C	LST8	P41318	303 aa		2.16	□□□□□ -2.06
RSA3	YLR221C	RPL37B	P51402	88 aa	Known RBP	2.16	□□□□□ -2.06
RSA3	YLR221C	SDH7	Q04401	133 aa		2.16	□□□□□ -2.06
RSA3	YLR221C	NMT1	P14743	455 aa		2.15	□□□□□ -2.07
RSA3	YLR221C	TRS20	P38334	175 aa		2.15	□□□□□ -2.07
RSA3	YLR221C	YJL009W	P47078	108 aa		2.15	□□□□□ -2.07
RSA3	YLR221C	MPC1	P53157	130 aa	Known RBP	2.15	□□□□□ -2.07
RSA3	YLR221C	DYN2	Q02647	92 aa		2.15	□□□□□ -2.07
RSA3	YLR221C	AIM36	Q03798	255 aa		2.15	□□□□□ -2.07
RSA3	YLR221C	Q0144	Q9ZZW2	109 aa		2.15	□□□□□ -2.07
RSA3	YLR221C	RPS22A	P0C0W1	130 aa	Known RBP	2.14	□□□□□ -2.07
RSA3	YLR221C	HAP3	P13434	144 aa		2.14	□□□□□ -2.07
RSA3	YLR221C	RPS22B	Q3E7Y3	130 aa	Known RBP	2.14	□□□□□ -2.07
RSA3	YLR221C	ROM2	P51862	1356 aa	Known RBP	2.13	□□□□□ -2.07
RSA3	YLR221C	UTP11	P34247	250 aa	Predicted RBP	2.13	□□□□□ -2.07
RSA3	YLR221C	HSP10	P38910	106 aa		2.13	□□□□□ -2.07
RSA3	YLR221C	MGR2	Q02889	113 aa		2.13	□□□□□ -2.07
RSA3	YLR221C	RPL40A	P0CH08	128 aa	Known RBP	2.12	□□□□□ -2.07
RSA3	YLR221C	RPL40B	P0CH09	128 aa	Known RBP	2.12	□□□□□ -2.07
RSA3	YLR221C	MRPL11	P36521	249 aa	Predicted RBP	2.12	□□□□□ -2.07
RSA3	YLR221C	NKP2	Q06162	153 aa		2.12	□□□□□ -2.07
RSA3	YLR221C	RIF1	P29539	1916 aa		2.12	□□□□□ -2.07
RSA3	YLR221C	UBR1	P19812	1950 aa		2.12	□□□□□ -2.07
RSA3	YLR221C	PAU21	P0CE86	164 aa		2.11	□□□□□ -2.07
RSA3	YLR221C	PAU22	P0CE87	164 aa		2.11	□□□□□ -2.07
RSA3	YLR221C	SFT1	P43682	97 aa		2.11	□□□□□ -2.07
RSA3	YLR221C	PRM3	Q08931	133 aa		2.11	□□□□□ -2.07
RSA3	YLR221C	PFY1	P07274	126 aa		2.1	□□□□□ -2.07
RSA3	YLR221C	COA4	Q05809	96 aa		2.1	□□□□□ -2.07
RSA3	YLR221C	YHR213W-B	Q8TGK1	99 aa		2.1	□□□□□ -2.07
RSA3	YLR221C	YLR296W	Q05898	108 aa		2.09	□□□□□ -2.07
RSA3	YLR221C	SLH1	P53327	1967 aa	Known RBP	2.09	□□□□□ -2.08
RSA3	YLR221C	YER188C-A	P0C0V2	99 aa		2.08	□□□□□ -2.08
RSA3	YLR221C	HHY1	P39982	102 aa		2.08	□□□□□ -2.08
RSA3	YLR221C	GTT2	Q12390	233 aa		2.08	□□□□□ -2.08
RSA3	YLR221C	RAD50	P12753	1312 aa		2.06	□□□□□ -2.08
RSA3	YLR221C	MRP49	P32388	137 aa		2.05	□□□□□ -2.08
RSA3	YLR221C	SAE3	P89114	91 aa		2.03	□□□□□ -2.08
RSA3	YLR221C	LDB18	Q07887	179 aa		2.03	□□□□□ -2.08
RSA3	YLR221C	COA6	Q3E846	104 aa		2.03	□□□□□ -2.08
RSA3	YLR221C	GSP1	P32835	219 aa	Known RBP	2.02	□□□□□ -2.09
RSA3	YLR221C	AIM18	P38884	321 aa		2.02	□□□□□ -2.09
RSA3	YLR221C	GAT4	P40569	121 aa		2.02	□□□□□ -2.09
RSA3	YLR221C	ERV14	P53173	138 aa		2.02	□□□□□ -2.09
RSA3	YLR221C	SLO1	Q3E784	85 aa		2.02	□□□□□ -2.09
RSA3	YLR221C	SNT2	P53127	1403 aa		2.01	□□□□□ -2.09
RSA3	YLR221C	RPL36B	O14455	100 aa	Known RBP	2.01	□□□□□ -2.09
RSA3	YLR221C	RTC6	O14464	93 aa		2.01	□□□□□ -2.09
RSA3	YLR221C	RPL36A	P05745	100 aa	Predicted RBP	2.01	□□□□□ -2.09
RSA3	YLR221C	AIM4	P38305	123 aa	Predicted RBP	2.01	□□□□□ -2.09
RSA3	YLR221C	MED11	Q99278	115 aa		2.01	□□□□□ -2.09
RSA3	YLR221C	SEC59	P20048	519 aa		2	□□□□□ -2.09
RSA3	YLR221C	VMA7	P39111	118 aa		1.99	□□□□□ -2.09
RSA3	YLR221C	MVB12	P42939	101 aa		1.98	□□□□□ -2.09
RSA3	YLR221C	FCF2	Q12035	217 aa	Predicted RBP	1.98	□□□□□ -2.09
RSA3	YLR221C	YSF3	P0C074	85 aa	Predicted RBP	1.97	□□□□□ -2.09
RSA3	YLR221C	YMR141C	P40211	102 aa		1.96	□□□□□ -2.1
RSA3	YLR221C	FIT3	Q08907	204 aa		1.96	□□□□□ -2.1
RSA3	YLR221C	YKL044W	P36092	106 aa		1.95	□□□□□ -2.1
RSA3	YLR221C	YBR013C	P38215	129 aa		1.95	□□□□□ -2.1
RSA3	YLR221C	MIC27	P50945	234 aa		1.95	□□□□□ -2.1
RSA3	YLR221C	AIM11	P87275	137 aa		1.95	□□□□□ -2.1
RSA3	YLR221C	HPA2	Q06592	156 aa		1.94	□□□□□ -2.1
RSA3	YLR221C	YLR118C	Q12354	227 aa		1.94	□□□□□ -2.1
RSA3	YLR221C	TRM732	Q03496	1420 aa		1.93	□□□□□ -2.1
RSA3	YLR221C	CDC39	P25655	2108 aa	Known RBP	1.93	□□□□□ -2.1
RSA3	YLR221C	YLR099W-A	Q3E798	87 aa		1.93	□□□□□ -2.1
RSA3	YLR221C	MYO2	P19524	1574 aa	Known RBP	1.93	□□□□□ -2.1
RSA3	YLR221C	HUG1	Q6Q5K6	68 aa		1.92	□□□□□ -2.1
RSA3	YLR221C	GPI19	Q04082	140 aa		1.91	□□□□□ -2.1
RSA3	YLR221C	YOR376W-A	Q3E805	51 aa		1.91	□□□□□ -2.1
RSA3	YLR221C	FRQ1	Q06389	190 aa		1.9	□□□□□ -2.11
RSA3	YLR221C	HFA1	P32874	2273 aa		1.89	□□□□□ -2.11
RSA3	YLR221C	SNF11	P38956	169 aa		1.89	□□□□□ -2.11
RSA3	YLR221C	RPB11	P38902	120 aa		1.88	□□□□□ -2.11
RSA3	YLR221C	SPC24	Q04477	213 aa		1.88	□□□□□ -2.11
RSA3	YLR221C	YLR194C	Q05777	254 aa		1.88	□□□□□ -2.11
RSA3	YLR221C	YIL163C	P40448	117 aa		1.87	□□□□□ -2.11

Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms