RNA–Protein interactions for RNA: YLR193C

UPS1, Transcript of Phosphatidic acid transfer protein, yeast

Gene UPS1, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPS1	YLR193C	YHR213W	P0CI67	198 aa		0.23	□□□□□ -2.37
UPS1	YLR193C	ANB1	P19211	157 aa		0.23	□□□□□ -2.37
UPS1	YLR193C	SUI1	P32911	108 aa	Known RBP	0.23	□□□□□ -2.37
UPS1	YLR193C	LSM1	P47017	172 aa	Known RBP	0.23	□□□□□ -2.37
UPS1	YLR193C	RAF1	Q06891	181 aa		0.23	□□□□□ -2.37
UPS1	YLR193C	NAT5	Q08689	176 aa		0.23	□□□□□ -2.37
UPS1	YLR193C	FIT3	Q08907	204 aa		0.23	□□□□□ -2.37
UPS1	YLR193C	YOR385W	Q08909	290 aa		0.23	□□□□□ -2.37
UPS1	YLR193C	YOR034C-A	Q3E735	80 aa		0.23	□□□□□ -2.37
UPS1	YLR193C	COA6	Q3E846	104 aa		0.23	□□□□□ -2.37
UPS1	YLR193C	HUG1	Q6Q5K6	68 aa		0.23	□□□□□ -2.37
UPS1	YLR193C	FUN14	P18411	198 aa		0.22	□□□□□ -2.37
UPS1	YLR193C	SFT2	P38166	215 aa		0.22	□□□□□ -2.37
UPS1	YLR193C	AIM4	P38305	123 aa	Predicted RBP	0.22	□□□□□ -2.37
UPS1	YLR193C	LSM8	P47093	109 aa	Known RBP	0.22	□□□□□ -2.37
UPS1	YLR193C	MOG1	P47123	218 aa		0.22	□□□□□ -2.37
UPS1	YLR193C	BRP1	P53194	125 aa		0.22	□□□□□ -2.37
UPS1	YLR193C	YDR366C	P87287	132 aa		0.22	□□□□□ -2.37
UPS1	YLR193C	YPL067C	Q02754	198 aa		0.22	□□□□□ -2.37
UPS1	YLR193C	KTI11	Q3E840	82 aa		0.22	□□□□□ -2.37
UPS1	YLR193C	YOR1	P53049	1477 aa		0.22	□□□□□ -2.37
UPS1	YLR193C	ARC19	P33204	171 aa	Known RBP	0.21	□□□□□ -2.38
UPS1	YLR193C	RPS1A	P33442	255 aa	Known RBP	0.21	□□□□□ -2.38
UPS1	YLR193C	UTP11	P34247	250 aa	Predicted RBP	0.21	□□□□□ -2.38
UPS1	YLR193C	YBR013C	P38215	129 aa		0.21	□□□□□ -2.38
UPS1	YLR193C	SPG1	P50088	95 aa		0.21	□□□□□ -2.38
UPS1	YLR193C	MIC27	P50945	234 aa		0.21	□□□□□ -2.38
UPS1	YLR193C	EMC4	P53073	190 aa		0.21	□□□□□ -2.38
UPS1	YLR193C	PFY1	P07274	126 aa		0.2	□□□□□ -2.38
UPS1	YLR193C	MRPL44	P19956	98 aa		0.2	□□□□□ -2.38
UPS1	YLR193C	QCR10	P37299	77 aa		0.2	□□□□□ -2.38
UPS1	YLR193C	YGL149W	P53116	101 aa		0.2	□□□□□ -2.38
UPS1	YLR193C	YMR321C	Q04898	105 aa		0.2	□□□□□ -2.38
UPS1	YLR193C	TY1B-H	O13535	1793 aa		0.19	□□□□□ -2.38
UPS1	YLR193C	SEC16	P48415	2195 aa	Known RBP	0.19	□□□□□ -2.38
UPS1	YLR193C	FAS2	P19097	1887 aa	Known RBP	0.19	□□□□□ -2.38
UPS1	YLR193C	RTC6	O14464	93 aa		0.19	□□□□□ -2.38
UPS1	YLR193C	YSF3	P0C074	85 aa	Predicted RBP	0.19	□□□□□ -2.38
UPS1	YLR193C	MRPL11	P36521	249 aa	Predicted RBP	0.19	□□□□□ -2.38
UPS1	YLR193C	YGR039W	P53225	103 aa		0.19	□□□□□ -2.38
UPS1	YLR193C	HHO1	P53551	258 aa		0.19	□□□□□ -2.38
UPS1	YLR193C	COF1	Q03048	143 aa	Known RBP	0.19	□□□□□ -2.38
UPS1	YLR193C	YLR296W	Q05898	108 aa		0.19	□□□□□ -2.38
UPS1	YLR193C	SPC3	Q12133	184 aa		0.19	□□□□□ -2.38
UPS1	YLR193C	YCR050C	P25630	102 aa		0.18	□□□□□ -2.38
UPS1	YLR193C	RBL2	P48606	106 aa	Known RBP	0.18	□□□□□ -2.38
UPS1	YLR193C	EFM5	P53200	248 aa	Known RBP	0.18	□□□□□ -2.38
UPS1	YLR193C	GTT2	Q12390	233 aa		0.18	□□□□□ -2.38
UPS1	YLR193C	SNF2	P22082	1703 aa		0.18	□□□□□ -2.38
UPS1	YLR193C	MYO1	P08964	1928 aa		0.17	□□□□□ -2.38
UPS1	YLR193C	SEC7	P11075	2009 aa	Known RBP	0.17	□□□□□ -2.38
UPS1	YLR193C	YAP3	P38749	330 aa		0.17	□□□□□ -2.38
UPS1	YLR193C	AIM18	P38884	321 aa		0.17	□□□□□ -2.38
UPS1	YLR193C	YAL064W	P39711	94 aa		0.17	□□□□□ -2.38
UPS1	YLR193C	HPM1	P40481	377 aa		0.17	□□□□□ -2.38
UPS1	YLR193C	SNT2	P53127	1403 aa		0.17	□□□□□ -2.38
UPS1	YLR193C	SDH7	Q04401	133 aa		0.17	□□□□□ -2.38
UPS1	YLR193C	YLR194C	Q05777	254 aa		0.17	□□□□□ -2.38
UPS1	YLR193C	TAO3	P40468	2376 aa		0.17	□□□□□ -2.38
UPS1	YLR193C	PAU21	P0CE86	164 aa		0.16	□□□□□ -2.38
UPS1	YLR193C	PAU22	P0CE87	164 aa		0.16	□□□□□ -2.38
UPS1	YLR193C	HAP3	P13434	144 aa		0.16	□□□□□ -2.38
UPS1	YLR193C	MRPL31	P14063	131 aa	Predicted RBP	0.16	□□□□□ -2.38
UPS1	YLR193C	RPL14A	P36105	138 aa	Known RBP	0.16	□□□□□ -2.38
UPS1	YLR193C	PRS3	P38689	320 aa	Known RBP	0.16	□□□□□ -2.38
UPS1	YLR193C	RPL14B	P38754	138 aa	Known RBP	0.16	□□□□□ -2.38
UPS1	YLR193C	HSP10	P38910	106 aa		0.16	□□□□□ -2.38
UPS1	YLR193C	LDB18	Q07887	179 aa		0.16	□□□□□ -2.38
UPS1	YLR193C	MED11	Q99278	115 aa		0.16	□□□□□ -2.38
UPS1	YLR193C	RPC19	P28000	142 aa	Known RBP	0.15	□□□□□ -2.39
UPS1	YLR193C	GSP1	P32835	219 aa	Known RBP	0.15	□□□□□ -2.39
UPS1	YLR193C	TRS20	P38334	175 aa		0.15	□□□□□ -2.39
UPS1	YLR193C	POR2	P40478	281 aa		0.15	□□□□□ -2.39
UPS1	YLR193C	ATP14	Q12349	124 aa		0.15	□□□□□ -2.39
UPS1	YLR193C	QCR6	P00127	147 aa		0.14	□□□□□ -2.39
UPS1	YLR193C	YJR128W	P47162	119 aa		0.14	□□□□□ -2.39
UPS1	YLR193C	ELC1	Q03071	99 aa		0.14	□□□□□ -2.39
UPS1	YLR193C	TVP18	Q04767	167 aa		0.14	□□□□□ -2.39
UPS1	YLR193C	FCF2	Q12035	217 aa	Predicted RBP	0.14	□□□□□ -2.39
UPS1	YLR193C	RPL36B	O14455	100 aa	Known RBP	0.13	□□□□□ -2.39
UPS1	YLR193C	RPL36A	P05745	100 aa	Predicted RBP	0.13	□□□□□ -2.39
UPS1	YLR193C	SUA7	P29055	345 aa	Predicted RBP	0.13	□□□□□ -2.39
UPS1	YLR193C	EMP24	P32803	203 aa	Known RBP	0.13	□□□□□ -2.39
UPS1	YLR193C	SRX1	P36077	127 aa		0.13	□□□□□ -2.39
UPS1	YLR193C	YIL163C	P40448	117 aa		0.13	□□□□□ -2.39
UPS1	YLR193C	YGR017W	P53210	297 aa		0.13	□□□□□ -2.39
UPS1	YLR193C	AUA1	P32450	94 aa		0.12	□□□□□ -2.39
UPS1	YLR193C	PHS1	P40857	217 aa		0.12	□□□□□ -2.39
UPS1	YLR193C	RPS29B	P41058	56 aa	Known RBP	0.11	□□□□□ -2.39
UPS1	YLR193C	YFR035C	P43608	114 aa		0.11	□□□□□ -2.39
UPS1	YLR193C	CSN9	Q03981	162 aa		0.11	□□□□□ -2.39
UPS1	YLR193C	YNL277W-A	Q3E7Z0	62 aa		0.11	□□□□□ -2.39
UPS1	YLR193C	ENV10	Q99382	181 aa		0.11	□□□□□ -2.39
UPS1	YLR193C	POL2	P21951	2222 aa	Known RBP	0.11	□□□□□ -2.39
UPS1	YLR193C	URB1	P34241	1764 aa	Known RBP	0.1	□□□□□ -2.39
UPS1	YLR193C	SEC59	P20048	519 aa		0.1	□□□□□ -2.39
UPS1	YLR193C	ICS3	P47034	131 aa		0.1	□□□□□ -2.39
UPS1	YLR193C	MPC1	P53157	130 aa	Known RBP	0.1	□□□□□ -2.39
UPS1	YLR193C	ERV14	P53173	138 aa		0.1	□□□□□ -2.39
UPS1	YLR193C	LCL1	Q02786	101 aa		0.1	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms