RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C IRC18P47056 224 aa1.3□□□□□ -2.2
RPF2YKR081C VPS71Q03433 280 aa1.3□□□□□ -2.2
RPF2YKR081C NKP2Q06162 153 aa1.3□□□□□ -2.2
RPF2YKR081C YPR145C-AQ2V2P0 78 aa1.3□□□□□ -2.2
RPF2YKR081C BPT1P14772 1559 aa1.3□□□□□ -2.2
RPF2YKR081C TIR1P10863 254 aa1.29□□□□□ -2.2
RPF2YKR081C PHO85P17157 305 aa1.29□□□□□ -2.2
RPF2YKR081C YRA2P36036 203 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
RPF2YKR081C PAM17P36147 197 aa1.29□□□□□ -2.2
RPF2YKR081C YBR090CP38253 122 aa1.29□□□□□ -2.2
RPF2YKR081C YHR140WP38842 239 aa1.29□□□□□ -2.2
RPF2YKR081C IPT1P38954 527 aa1.29□□□□□ -2.2
RPF2YKR081C YEA4P40004 342 aa1.29□□□□□ -2.2
RPF2YKR081C SPC25P40014 221 aa1.29□□□□□ -2.2
RPF2YKR081C CWP2P43497 92 aa1.29□□□□□ -2.2
RPF2YKR081C YFL065CP43539 102 aa1.29□□□□□ -2.2
RPF2YKR081C XPT1P47165 209 aa1.29□□□□□ -2.2
RPF2YKR081C YGL101WP53144 215 aa1.29□□□□□ -2.2
RPF2YKR081C RAV2Q03956 351 aa1.29□□□□□ -2.2
RPF2YKR081C HPT1Q04178 221 aaKnown RBP1.29□□□□□ -2.2
RPF2YKR081C YPR114WQ06107 315 aa1.29□□□□□ -2.2
RPF2YKR081C YHR007C-AQ07074 71 aa1.29□□□□□ -2.2
RPF2YKR081C YOL131WQ08270 108 aa1.29□□□□□ -2.2
RPF2YKR081C YOL160WQ08321 113 aa1.29□□□□□ -2.2
RPF2YKR081C YPR203WQ08994 102 aa1.29□□□□□ -2.2
RPF2YKR081C HUT1Q12520 339 aa1.29□□□□□ -2.2
RPF2YKR081C YOR376W-AQ3E805 51 aa1.29□□□□□ -2.2
RPF2YKR081C PCC1Q3E833 88 aa1.29□□□□□ -2.2
RPF2YKR081C YIL134C-AQ45U18 67 aa1.29□□□□□ -2.2
RPF2YKR081C IGO2Q9P305 131 aa1.29□□□□□ -2.2
RPF2YKR081C NUP159P40477 1460 aa1.29□□□□□ -2.2
RPF2YKR081C DNF2Q12675 1612 aa1.29□□□□□ -2.2
RPF2YKR081C RPA190P10964 1664 aaKnown RBP1.29□□□□□ -2.2
RPF2YKR081C YER188C-AP0C0V2 99 aa1.28□□□□□ -2.2
RPF2YKR081C HAP3P13434 144 aa1.28□□□□□ -2.2
RPF2YKR081C RPB3P16370 318 aaKnown RBP1.28□□□□□ -2.2
RPF2YKR081C RPL14AP36105 138 aaKnown RBP1.28□□□□□ -2.2
RPF2YKR081C PDX3P38075 228 aaKnown RBP1.28□□□□□ -2.2
RPF2YKR081C RPL14BP38754 138 aaKnown RBP1.28□□□□□ -2.2
RPF2YKR081C YAR029WP39549 74 aa1.28□□□□□ -2.2
RPF2YKR081C APQ12P40532 138 aa1.28□□□□□ -2.2
RPF2YKR081C FIP1P45976 327 aa1.28□□□□□ -2.2
RPF2YKR081C ARP3P47117 449 aaKnown RBP1.28□□□□□ -2.2
RPF2YKR081C AIM25P47140 327 aa1.28□□□□□ -2.2
RPF2YKR081C GEP7P53171 287 aa1.28□□□□□ -2.2
RPF2YKR081C YGR050CP53231 118 aa1.28□□□□□ -2.2
RPF2YKR081C YDR274CP87283 123 aa1.28□□□□□ -2.2
RPF2YKR081C YMR082CQ04276 118 aa1.28□□□□□ -2.2
RPF2YKR081C YMR103CQ04436 120 aa1.28□□□□□ -2.2
RPF2YKR081C YMR252CQ04814 134 aa1.28□□□□□ -2.2
RPF2YKR081C NAT5Q08689 176 aa1.28□□□□□ -2.2
RPF2YKR081C UFD4P33202 1483 aa1.28□□□□□ -2.2
RPF2YKR081C ULS1Q08562 1619 aa1.28□□□□□ -2.2
RPF2YKR081C FAS2P19097 1887 aaKnown RBP1.28□□□□□ -2.2
RPF2YKR081C RPO21P04050 1733 aaKnown RBP1.27□□□□□ -2.21
RPF2YKR081C STU1P38198 1513 aa1.27□□□□□ -2.21
RPF2YKR081C SEC4P07560 215 aaKnown RBP1.27□□□□□ -2.21
RPF2YKR081C ATP5P09457 212 aa1.27□□□□□ -2.21
RPF2YKR081C RPL30P14120 105 aaKnown RBP1.27□□□□□ -2.21
RPF2YKR081C YKL102CP34249 101 aa1.27□□□□□ -2.21
RPF2YKR081C HMF1P40037 129 aaKnown RBP1.27□□□□□ -2.21
RPF2YKR081C YPL073CP40323 161 aa1.27□□□□□ -2.21
RPF2YKR081C YJL218WP40892 196 aaKnown RBP1.27□□□□□ -2.21
RPF2YKR081C PAM16P42949 149 aa1.27□□□□□ -2.21
RPF2YKR081C SBH1P52870 82 aa1.27□□□□□ -2.21
RPF2YKR081C YGR039WP53225 103 aa1.27□□□□□ -2.21
RPF2YKR081C LSM3P57743 89 aaKnown RBP1.27□□□□□ -2.21
RPF2YKR081C AIM11P87275 137 aa1.27□□□□□ -2.21
RPF2YKR081C YMR099CQ03161 297 aaKnown RBP1.27□□□□□ -2.21
RPF2YKR081C MAK3Q03503 176 aa1.27□□□□□ -2.21
RPF2YKR081C SWC7Q06707 132 aa1.27□□□□□ -2.21
RPF2YKR081C FIT3Q08907 204 aa1.27□□□□□ -2.21
RPF2YKR081C PRM3Q08931 133 aa1.27□□□□□ -2.21
RPF2YKR081C FCY1Q12178 158 aa1.27□□□□□ -2.21
RPF2YKR081C YDL085C-AQ3E7B7 68 aaKnown RBP1.27□□□□□ -2.21
RPF2YKR081C YNL277W-AQ3E7Z0 62 aa1.27□□□□□ -2.21
RPF2YKR081C RRT15Q3E811 62 aa1.27□□□□□ -2.21
RPF2YKR081C YNR034W-AQ3E841 98 aa1.27□□□□□ -2.21
RPF2YKR081C YHR214C-EQ8TGK0 99 aa1.27□□□□□ -2.21
RPF2YKR081C UTP10P42945 1769 aaKnown RBP1.26□□□□□ -2.21
RPF2YKR081C TY1B-NL2Q99337 1749 aaKnown RBP1.26□□□□□ -2.21
RPF2YKR081C ESC1Q03661 1658 aaKnown RBP1.26□□□□□ -2.21
RPF2YKR081C NTE1Q04958 1679 aa1.26□□□□□ -2.21
RPF2YKR081C YOR093CQ12275 1648 aa1.26□□□□□ -2.21
RPF2YKR081C MBF1O14467 151 aaKnown RBP1.26□□□□□ -2.21
RPF2YKR081C PAI3P01094 68 aa1.26□□□□□ -2.21
RPF2YKR081C RPS25BP0C0T4 108 aaKnown RBP1.26□□□□□ -2.21
RPF2YKR081C SNF4P12904 322 aa1.26□□□□□ -2.21
RPF2YKR081C ANB1P19211 157 aa1.26□□□□□ -2.21
RPF2YKR081C MRS4P23500 304 aa1.26□□□□□ -2.21
RPF2YKR081C SPO13P23624 291 aa1.26□□□□□ -2.21
RPF2YKR081C MRPL11P36521 249 aaPredicted RBP1.26□□□□□ -2.21
RPF2YKR081C ATG8P38182 117 aaRIP-Chip data1.26□□□□□ -2.21not detected
RPF2YKR081C NSG1P38837 291 aa1.26□□□□□ -2.21
RPF2YKR081C RPB11P38902 120 aa1.26□□□□□ -2.21
RPF2YKR081C YNL198CP40166 100 aa1.26□□□□□ -2.21
RPF2YKR081C MPM1P40364 252 aa1.26□□□□□ -2.21
RPF2YKR081C GAT4P40569 121 aa1.26□□□□□ -2.21
RPF2YKR081C HYR1P40581 163 aaKnown RBP1.26□□□□□ -2.21
RPF2YKR081C VMA21P41806 77 aa1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 72 ms