RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C YBR013CP38215 129 aa0.22□□□□□ -2.37
CUP1-2YHR055C YPL067CQ02754 198 aa0.22□□□□□ -2.37
CUP1-2YHR055C RAV2Q03956 351 aa0.22□□□□□ -2.37
CUP1-2YHR055C TY4B-JP47024 1803 aa0.22□□□□□ -2.37
CUP1-2YHR055C LSM1P47017 172 aaKnown RBP0.21□□□□□ -2.38
CUP1-2YHR055C MIC27P50945 234 aa0.21□□□□□ -2.38
CUP1-2YHR055C RPS29BP41058 56 aaKnown RBP0.2□□□□□ -2.38
CUP1-2YHR055C YGR201CP42936 225 aa0.2□□□□□ -2.38
CUP1-2YHR055C FIG1P38224 298 aa0.19□□□□□ -2.38
CUP1-2YHR055C LSM8P47093 109 aaKnown RBP0.19□□□□□ -2.38
CUP1-2YHR055C MRPL44P19956 98 aa0.18□□□□□ -2.38
CUP1-2YHR055C SUI1P32911 108 aaKnown RBP0.18□□□□□ -2.38
CUP1-2YHR055C SPG1P50088 95 aa0.18□□□□□ -2.38
CUP1-2YHR055C YOR385WQ08909 290 aa0.18□□□□□ -2.38
CUP1-2YHR055C AIM4P38305 123 aaPredicted RBP0.17□□□□□ -2.38
CUP1-2YHR055C BRP1P53194 125 aa0.17□□□□□ -2.38
CUP1-2YHR055C PKR1Q03880 122 aaKnown RBP0.17□□□□□ -2.38
CUP1-2YHR055C PET20Q99373 253 aa0.17□□□□□ -2.38
CUP1-2YHR055C YSF3P0C074 85 aaPredicted RBP0.16□□□□□ -2.38
CUP1-2YHR055C MED11Q99278 115 aa0.16□□□□□ -2.38
CUP1-2YHR055C BNI1P41832 1953 aa0.15□□□□□ -2.38
CUP1-2YHR055C MRPL31P14063 131 aaPredicted RBP0.15□□□□□ -2.39
CUP1-2YHR055C YRF1-3P0CX14 1859 aa0.14□□□□□ -2.39
CUP1-2YHR055C YRF1-7P0CX15 1859 aa0.14□□□□□ -2.39
CUP1-2YHR055C MRPL11P36521 249 aaPredicted RBP0.14□□□□□ -2.39
CUP1-2YHR055C YGL149WP53116 101 aa0.14□□□□□ -2.39
CUP1-2YHR055C YLR194CQ05777 254 aa0.14□□□□□ -2.39
CUP1-2YHR055C YLR296WQ05898 108 aa0.14□□□□□ -2.39
CUP1-2YHR055C ATP14Q12349 124 aa0.14□□□□□ -2.39
CUP1-2YHR055C SNF2P22082 1703 aa0.13□□□□□ -2.39
CUP1-2YHR055C YDR366CP87287 132 aa0.13□□□□□ -2.39
CUP1-2YHR055C RME1P32338 300 aaKnown RBP0.12□□□□□ -2.39
CUP1-2YHR055C POR2P40478 281 aa0.12□□□□□ -2.39
CUP1-2YHR055C HAP3P13434 144 aa0.11□□□□□ -2.39
CUP1-2YHR055C RPS1AP33442 255 aaKnown RBP0.11□□□□□ -2.39
CUP1-2YHR055C PET54P10834 293 aa0.1□□□□□ -2.39
CUP1-2YHR055C LDB18Q07887 179 aa0.1□□□□□ -2.39
CUP1-2YHR055C GTT2Q12390 233 aa0.1□□□□□ -2.39
CUP1-2YHR055C SNT2P53127 1403 aa0.09□□□□□ -2.4
CUP1-2YHR055C YOR1P53049 1477 aa0.09□□□□□ -2.4
CUP1-2YHR055C QCR10P37299 77 aa0.08□□□□□ -2.4
CUP1-2YHR055C YJR128WP47162 119 aa0.08□□□□□ -2.4
CUP1-2YHR055C TY1B-HO13535 1793 aa0.08□□□□□ -2.4
CUP1-2YHR055C GSP1P32835 219 aaKnown RBP0.07□□□□□ -2.4
CUP1-2YHR055C RTC6O14464 93 aa0.06□□□□□ -2.4
CUP1-2YHR055C MOG1P47123 218 aa0.06□□□□□ -2.4
CUP1-2YHR055C SDH7Q04401 133 aa0.06□□□□□ -2.4
CUP1-2YHR055C EMP24P32803 203 aaKnown RBP0.05□□□□□ -2.4
CUP1-2YHR055C SRX1P36077 127 aa0.05□□□□□ -2.4
CUP1-2YHR055C AIM18P38884 321 aa0.05□□□□□ -2.4
CUP1-2YHR055C HHO1P53551 258 aa0.05□□□□□ -2.4
CUP1-2YHR055C YMR320WQ04897 101 aa0.05□□□□□ -2.4
CUP1-2YHR055C COF1Q03048 143 aaKnown RBP0.04□□□□□ -2.4
CUP1-2YHR055C PAU21P0CE86 164 aa0.03□□□□□ -2.4
CUP1-2YHR055C PAU22P0CE87 164 aa0.03□□□□□ -2.4
CUP1-2YHR055C HSP10P38910 106 aa0.03□□□□□ -2.4
CUP1-2YHR055C YGR039WP53225 103 aa0.03□□□□□ -2.4
CUP1-2YHR055C FCF2Q12035 217 aaPredicted RBP0.03□□□□□ -2.4
CUP1-2YHR055C SPC3Q12133 184 aa0.03□□□□□ -2.4
CUP1-2YHR055C FAS2P19097 1887 aaKnown RBP0.03□□□□□ -2.41
CUP1-2YHR055C PRS3P38689 320 aaKnown RBP0.02□□□□□ -2.41
CUP1-2YHR055C MYO1P08964 1928 aa0.01□□□□□ -2.41
CUP1-2YHR055C TAO3P40468 2376 aa0.01□□□□□ -2.41
CUP1-2YHR055C TLG1Q03322 224 aa0□□□□□ -2.41
CUP1-2YHR055C YFR035CP43608 114 aa-0.01□□□□□ -2.41
CUP1-2YHR055C SEC16P48415 2195 aaKnown RBP-0.01□□□□□ -2.41
CUP1-2YHR055C RPL36BO14455 100 aaKnown RBP-0.02□□□□□ -2.41
CUP1-2YHR055C RPL36AP05745 100 aaPredicted RBP-0.02□□□□□ -2.41
CUP1-2YHR055C YCR050CP25630 102 aa-0.02□□□□□ -2.41
CUP1-2YHR055C RPC19P28000 142 aaKnown RBP-0.02□□□□□ -2.41
CUP1-2YHR055C AUA1P32450 94 aa-0.02□□□□□ -2.41
CUP1-2YHR055C ARC19P33204 171 aaKnown RBP-0.02□□□□□ -2.41
CUP1-2YHR055C YIL163CP40448 117 aa-0.02□□□□□ -2.41
CUP1-2YHR055C RBL2P48606 106 aaKnown RBP-0.02□□□□□ -2.41
CUP1-2YHR055C YAL064WP39711 94 aa-0.03□□□□□ -2.41
CUP1-2YHR055C ARL3Q02804 198 aa-0.03□□□□□ -2.41
CUP1-2YHR055C YDR010CQ12426 110 aa-0.03□□□□□ -2.41
CUP1-2YHR055C HPM1P40481 377 aa-0.04□□□□□ -2.42
CUP1-2YHR055C ICS3P47034 131 aa-0.04□□□□□ -2.42
CUP1-2YHR055C YGR017WP53210 297 aa-0.04□□□□□ -2.42
CUP1-2YHR055C BRR2P32639 2163 aaKnown RBP-0.05□□□□□ -2.42
CUP1-2YHR055C EFM5P53200 248 aaKnown RBP-0.06□□□□□ -2.42
CUP1-2YHR055C OCA6Q12454 224 aa-0.06□□□□□ -2.42
CUP1-2YHR055C SUA7P29055 345 aaPredicted RBP-0.07□□□□□ -2.42
CUP1-2YHR055C ELC1Q03071 99 aa-0.07□□□□□ -2.42
CUP1-2YHR055C YGR240C-AQ3E786 66 aa-0.07□□□□□ -2.42
CUP1-2YHR055C RPL14AP36105 138 aaKnown RBP-0.08□□□□□ -2.42
CUP1-2YHR055C RPL14BP38754 138 aaKnown RBP-0.08□□□□□ -2.42
CUP1-2YHR055C YEA6P39953 335 aa-0.08□□□□□ -2.42
CUP1-2YHR055C ENV10Q99382 181 aa-0.08□□□□□ -2.42
CUP1-2YHR055C YAP3P38749 330 aa-0.09□□□□□ -2.42
CUP1-2YHR055C MPC1P53157 130 aaKnown RBP-0.1□□□□□ -2.43
CUP1-2YHR055C LCL1Q02786 101 aa-0.1□□□□□ -2.43
CUP1-2YHR055C SMD2Q06217 110 aaKnown RBP-0.1□□□□□ -2.43
CUP1-2YHR055C HPA2Q06592 156 aa-0.1□□□□□ -2.43
CUP1-2YHR055C PHS1P40857 217 aa-0.13□□□□□ -2.43
CUP1-2YHR055C RPL22AP05749 121 aaKnown RBP-0.14□□□□□ -2.43
CUP1-2YHR055C YGL041C-BQ3E750 60 aa-0.14□□□□□ -2.43
CUP1-2YHR055C YOL164W-AQ3E7A5 60 aa-0.15□□□□□ -2.43
CUP1-2YHR055C TRM732Q03496 1420 aa-0.15□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 73.9 ms