RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	MRPL11	P36521	249 aa	Predicted RBP	5	□□□□□ -1.61
VMA3	YEL027W	MBB1	P39534	108 aa		5	□□□□□ -1.61
VMA3	YEL027W	YIL163C	P40448	117 aa		5	□□□□□ -1.61
VMA3	YEL027W	MRPL49	P40858	161 aa	Predicted RBP	5	□□□□□ -1.61
VMA3	YEL027W	PAU5	P43575	122 aa		5	□□□□□ -1.61
VMA3	YEL027W	GPI2	P46961	280 aa		5	□□□□□ -1.61
VMA3	YEL027W	CAX4	P53223	239 aa		5	□□□□□ -1.61
VMA3	YEL027W	SAE3	P89114	91 aa		5	□□□□□ -1.61
VMA3	YEL027W	RRG8	Q06109	277 aa		5	□□□□□ -1.61
VMA3	YEL027W	YOL160W	Q08321	113 aa		5	□□□□□ -1.61
VMA3	YEL027W	YPR013C	Q12145	317 aa		5	□□□□□ -1.61
VMA3	YEL027W	FMP49	A0A023PZB3	126 aa		4.99	□□□□□ -1.61
VMA3	YEL027W	RPL31A	P0C2H8	113 aa	Known RBP	4.99	□□□□□ -1.61
VMA3	YEL027W	RPL31B	P0C2H9	113 aa	Known RBP	4.99	□□□□□ -1.61
VMA3	YEL027W	RPS8A	P0CX39	200 aa	Known RBP	4.99	□□□□□ -1.61
VMA3	YEL027W	RPS8B	P0CX40	200 aa	Known RBP	4.99	□□□□□ -1.61
VMA3	YEL027W	NHP6A	P11632	93 aa	Known RBP	4.99	□□□□□ -1.61
VMA3	YEL027W	MRPL20	P22354	195 aa	Predicted RBP	4.99	□□□□□ -1.61
VMA3	YEL027W	HSP10	P38910	106 aa		4.99	□□□□□ -1.61
VMA3	YEL027W	GLC8	P41818	229 aa		4.99	□□□□□ -1.61
VMA3	YEL027W	LCB3	P47013	409 aa		4.99	□□□□□ -1.61
VMA3	YEL027W	TOM7	P53507	60 aa		4.99	□□□□□ -1.61
VMA3	YEL027W	RAV2	Q03956	351 aa		4.99	□□□□□ -1.61
VMA3	YEL027W	POM33	Q12164	279 aa		4.99	□□□□□ -1.61
VMA3	YEL027W	YLR302C	O13544	120 aa		4.98	□□□□□ -1.61
VMA3	YEL027W	HTB2	P02294	131 aa		4.98	□□□□□ -1.61
VMA3	YEL027W	SRP21	P32342	167 aa		4.98	□□□□□ -1.61
VMA3	YEL027W	RTG1	P32607	177 aa		4.98	□□□□□ -1.61
VMA3	YEL027W	YPT10	P38146	199 aa		4.98	□□□□□ -1.61
VMA3	YEL027W	IRC22	P40006	225 aa		4.98	□□□□□ -1.61
VMA3	YEL027W	HUA1	P40325	198 aa		4.98	□□□□□ -1.61
VMA3	YEL027W	HIT1	P46973	164 aa		4.98	□□□□□ -1.61
VMA3	YEL027W	ATP19	P81451	68 aa		4.98	□□□□□ -1.61
VMA3	YEL027W	NAT3	Q06504	195 aa		4.98	□□□□□ -1.61
VMA3	YEL027W	IZH3	Q07959	543 aa		4.98	□□□□□ -1.61
VMA3	YEL027W	GEP3	Q08622	556 aa		4.98	□□□□□ -1.61
VMA3	YEL027W	YOP1	Q12402	180 aa		4.98	□□□□□ -1.61
VMA3	YEL027W	TMA7	Q3E764	64 aa	Known RBP	4.98	□□□□□ -1.61
VMA3	YEL027W	AME1	P38313	324 aa		4.97	□□□□□ -1.61
VMA3	YEL027W	MPC2	P38857	129 aa		4.97	□□□□□ -1.61
VMA3	YEL027W	MST28	P39552	234 aa		4.97	□□□□□ -1.61
VMA3	YEL027W	TDA4	P47153	279 aa		4.97	□□□□□ -1.61
VMA3	YEL027W	MST27	P53176	234 aa		4.97	□□□□□ -1.61
VMA3	YEL027W	YIP3	P53633	176 aa		4.97	□□□□□ -1.61
VMA3	YEL027W	STP4	Q07351	490 aa		4.97	□□□□□ -1.61
VMA3	YEL027W	SMT3	Q12306	101 aa	Known RBP	4.97	□□□□□ -1.61
VMA3	YEL027W	ECM33	P38248	429 aa	Known RBP	4.96	□□□□□ -1.62
VMA3	YEL027W	YOR105W	Q08504	108 aa		4.96	□□□□□ -1.62
VMA3	YEL027W	YPL162C	Q12042	273 aa		4.96	□□□□□ -1.62
VMA3	YEL027W	YNL146C-A	Q3E7Z1	64 aa		4.96	□□□□□ -1.62
VMA3	YEL027W	YOR011W-A	Q3E807	68 aa		4.96	□□□□□ -1.62
VMA3	YEL027W	TIR1	P10863	254 aa		4.95	□□□□□ -1.62
VMA3	YEL027W	ELF1	P36053	145 aa		4.95	□□□□□ -1.62
VMA3	YEL027W	SRP14	P38985	146 aa		4.95	□□□□□ -1.62
VMA3	YEL027W	PRE5	P40302	234 aa	Known RBP	4.95	□□□□□ -1.62
VMA3	YEL027W	SIM1	P40472	476 aa		4.95	□□□□□ -1.62
VMA3	YEL027W	ALG13	P53178	202 aa		4.95	□□□□□ -1.62
VMA3	YEL027W	YGR025W	P53216	100 aa		4.95	□□□□□ -1.62
VMA3	YEL027W	DAD4	P69851	72 aa		4.95	□□□□□ -1.62
VMA3	YEL027W	APS2	Q00381	147 aa		4.95	□□□□□ -1.62
VMA3	YEL027W	CWC27	Q02770	301 aa		4.95	□□□□□ -1.62
VMA3	YEL027W	NAT5	Q08689	176 aa		4.95	□□□□□ -1.62
VMA3	YEL027W	DAD1	Q12248	94 aa		4.95	□□□□□ -1.62
VMA3	YEL027W	PRM7	Q12459	698 aa		4.95	□□□□□ -1.62
VMA3	YEL027W	TAR1	Q8TGM6	124 aa		4.95	□□□□□ -1.62
VMA3	YEL027W	CPT1	P17898	393 aa		4.94	□□□□□ -1.62
VMA3	YEL027W	MDM10	P18409	493 aa		4.94	□□□□□ -1.62
VMA3	YEL027W	QRI5	P32344	111 aa		4.94	□□□□□ -1.62
VMA3	YEL027W	YGL015C	P33199	130 aa		4.94	□□□□□ -1.62
VMA3	YEL027W	YBR090C	P38253	122 aa		4.94	□□□□□ -1.62
VMA3	YEL027W	PKR1	Q03880	122 aa	Known RBP	4.94	□□□□□ -1.62
VMA3	YEL027W	TRI1	Q05024	226 aa		4.94	□□□□□ -1.62
VMA3	YEL027W	YLR281C	Q05863	155 aa		4.94	□□□□□ -1.62
VMA3	YEL027W	UTP23	Q12339	254 aa	Known RBP	4.94	□□□□□ -1.62
VMA3	YEL027W	HAP3	P13434	144 aa		4.93	□□□□□ -1.62
VMA3	YEL027W	YMR141C	P40211	102 aa		4.93	□□□□□ -1.62
VMA3	YEL027W	YDL183C	P48569	320 aa		4.93	□□□□□ -1.62
VMA3	YEL027W	DUO1	P53168	247 aa	Known RBP	4.93	□□□□□ -1.62
VMA3	YEL027W	GRH1	Q04410	372 aa	Known RBP	4.93	□□□□□ -1.62
VMA3	YEL027W	CCW12	Q12127	133 aa		4.93	□□□□□ -1.62
VMA3	YEL027W	YLR342W-A	Q3E810	57 aa		4.93	□□□□□ -1.62
VMA3	YEL027W	POR1	P04840	283 aa	Known RBP	4.92	□□□□□ -1.62
VMA3	YEL027W	HMRA1	P0CY11	126 aa		4.92	□□□□□ -1.62
VMA3	YEL027W	YGL010W	P25338	174 aa		4.92	□□□□□ -1.62
VMA3	YEL027W	FZF1	P32805	299 aa		4.92	□□□□□ -1.62
VMA3	YEL027W	SOH1	P38633	127 aa		4.92	□□□□□ -1.62
VMA3	YEL027W	YER135C	P40082	130 aa		4.92	□□□□□ -1.62
VMA3	YEL027W	CDC40	P40968	455 aa	Predicted RBP	4.92	□□□□□ -1.62
VMA3	YEL027W	YFR045W	P43617	309 aa		4.92	□□□□□ -1.62
VMA3	YEL027W	YJR096W	P47137	282 aa		4.92	□□□□□ -1.62
VMA3	YEL027W	MIC26	P50087	233 aa		4.92	□□□□□ -1.62
VMA3	YEL027W	YDR274C	P87283	123 aa		4.92	□□□□□ -1.62
VMA3	YEL027W	RUB1	Q03919	77 aa		4.92	□□□□□ -1.62
VMA3	YEL027W	GIM5	Q04493	163 aa		4.92	□□□□□ -1.62
VMA3	YEL027W	TVP18	Q04767	167 aa		4.92	□□□□□ -1.62
VMA3	YEL027W	YHR022C	P38763	256 aa		4.91	□□□□□ -1.62
VMA3	YEL027W	SPI1	P40092	148 aa		4.91	□□□□□ -1.62
VMA3	YEL027W	UPS3	Q04006	179 aa		4.91	□□□□□ -1.62
VMA3	YEL027W	YMR244W	Q04018	355 aa		4.91	□□□□□ -1.62
VMA3	YEL027W	MSC3	Q05812	728 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms