RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeastyeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDR15YDR406W LAS17Q12446 633 aa3.85□□□□□ -1.79
PDR15YDR406W RPS28AQ3E7X9 67 aaPredicted RBP3.85□□□□□ -1.79
PDR15YDR406W YGR035W-AQ45U48 73 aa3.85□□□□□ -1.79
PDR15YDR406W POR2P40478 281 aa3.85□□□□□ -1.79
PDR15YDR406W YIL024CP40543 189 aa3.85□□□□□ -1.79
PDR15YDR406W YIA6P40556 373 aa3.85□□□□□ -1.79
PDR15YDR406W ALG13P53178 202 aa3.85□□□□□ -1.79
PDR15YDR406W HFA1P32874 2273 aa3.84□□□□□ -1.79
PDR15YDR406W AGA2P32781 87 aa3.84□□□□□ -1.79
PDR15YDR406W MTC6P38849 526 aa3.84□□□□□ -1.79
PDR15YDR406W YHR173CP38864 112 aa3.84□□□□□ -1.79
PDR15YDR406W SPG4Q04438 115 aa3.84□□□□□ -1.79
PDR15YDR406W FMP27Q06179 2628 aa3.84□□□□□ -1.79
PDR15YDR406W SEN1Q00416 2231 aaKnown RBP3.84□□□□□ -1.79
PDR15YDR406W GPI2P46961 280 aa3.84□□□□□ -1.8
PDR15YDR406W YJR015WP47090 510 aa3.84□□□□□ -1.8
PDR15YDR406W PBP4Q07362 185 aaKnown RBP3.84□□□□□ -1.8
PDR15YDR406W ERI1P62651 68 aaKnown RBP3.83□□□□□ -1.8
PDR15YDR406W COA2Q3E823 68 aa3.83□□□□□ -1.8
PDR15YDR406W CDC50P25656 391 aa3.83□□□□□ -1.8
PDR15YDR406W RPL14AP36105 138 aaKnown RBP3.83□□□□□ -1.8
PDR15YDR406W RPL14BP38754 138 aaKnown RBP3.83□□□□□ -1.8
PDR15YDR406W YER076CP40049 302 aa3.83□□□□□ -1.8
PDR15YDR406W YDR114CQ04597 100 aa3.83□□□□□ -1.8
PDR15YDR406W YPS3Q12303 508 aa3.83□□□□□ -1.8
PDR15YDR406W VPS13Q07878 3144 aa3.83□□□□□ -1.8
PDR15YDR406W PAU19P0CE85 124 aa3.83□□□□□ -1.8
PDR15YDR406W PAU21P0CE86 164 aa3.83□□□□□ -1.8
PDR15YDR406W PAU22P0CE87 164 aa3.83□□□□□ -1.8
PDR15YDR406W PAU3P25610 124 aa3.83□□□□□ -1.8
PDR15YDR406W GLE2P40066 365 aa3.83□□□□□ -1.8
PDR15YDR406W ATG39Q06159 398 aa3.83□□□□□ -1.8
PDR15YDR406W YOL118CQ08259 102 aa3.83□□□□□ -1.8
PDR15YDR406W YCR023CP25351 611 aa3.83□□□□□ -1.8
PDR15YDR406W PIR5P46999 287 aa3.83□□□□□ -1.8
PDR15YDR406W YGL088WP53151 121 aa3.83□□□□□ -1.8
PDR15YDR406W PRR2Q12310 699 aa3.83□□□□□ -1.8
PDR15YDR406W RPL15AP05748 204 aaKnown RBP3.82□□□□□ -1.8
PDR15YDR406W CYC3P06182 269 aa3.82□□□□□ -1.8
PDR15YDR406W FLO5P38894 1075 aa3.82□□□□□ -1.8
PDR15YDR406W PEX17P40155 199 aa3.82□□□□□ -1.8
PDR15YDR406W HAC1P41546 238 aa3.82□□□□□ -1.8
PDR15YDR406W GON7P46984 123 aa3.82□□□□□ -1.8
PDR15YDR406W YGR151CP53287 111 aa3.82□□□□□ -1.8
PDR15YDR406W RPL15BP54780 204 aaPredicted RBP3.82□□□□□ -1.8
PDR15YDR406W YPR063CQ12160 140 aa3.82□□□□□ -1.8
PDR15YDR406W HMRA2P0CY13 119 aa3.82□□□□□ -1.8
PDR15YDR406W SFT2P38166 215 aa3.82□□□□□ -1.8
PDR15YDR406W DFG10P40526 253 aa3.82□□□□□ -1.8
PDR15YDR406W PMP3P87284 55 aa3.82□□□□□ -1.8
PDR15YDR406W RPL39P04650 51 aa3.82□□□□□ -1.8
PDR15YDR406W PRY2P36110 329 aa3.82□□□□□ -1.8
PDR15YDR406W YGR050CP53231 118 aa3.82□□□□□ -1.8
PDR15YDR406W RPL42AP0CX27 106 aaKnown RBP3.81□□□□□ -1.8
PDR15YDR406W RPL42BP0CX28 106 aaKnown RBP3.81□□□□□ -1.8
PDR15YDR406W YNK1P36010 153 aaKnown RBP3.81□□□□□ -1.8
PDR15YDR406W PAU15P40585 124 aa3.81□□□□□ -1.8
PDR15YDR406W YMR253CQ04835 414 aa3.81□□□□□ -1.8
PDR15YDR406W ADH1P00330 348 aaKnown RBP3.81□□□□□ -1.8
PDR15YDR406W PEX22P39718 180 aa3.81□□□□□ -1.8
PDR15YDR406W GLT1Q12680 2145 aaKnown RBP3.81□□□□□ -1.8
PDR15YDR406W RAD6P06104 172 aa3.81□□□□□ -1.8
PDR15YDR406W YPT53P36019 220 aa3.81□□□□□ -1.8
PDR15YDR406W YHR140WP38842 239 aa3.81□□□□□ -1.8
PDR15YDR406W AIR2Q12476 344 aaKnown RBP3.81□□□□□ -1.8
PDR15YDR406W DAD4P69851 72 aa3.8□□□□□ -1.8
PDR15YDR406W YMR007WQ03675 126 aa3.8□□□□□ -1.8
PDR15YDR406W YIR021W-AQ3E739 70 aa3.8□□□□□ -1.8
PDR15YDR406W YLR412C-AQ3E742 68 aa3.8□□□□□ -1.8
PDR15YDR406W SEC16P48415 2195 aaKnown RBP3.8□□□□□ -1.8
PDR15YDR406W SAP30P38429 201 aa3.8□□□□□ -1.8
PDR15YDR406W ACC1Q00955 2233 aaKnown RBP3.8□□□□□ -1.8
PDR15YDR406W Q0255P03881 472 aa3.8□□□□□ -1.8
PDR15YDR406W MRPL44P19956 98 aa3.8□□□□□ -1.8
PDR15YDR406W CDC39P25655 2108 aaKnown RBP3.8□□□□□ -1.8
PDR15YDR406W YBL059WP34224 193 aa3.8□□□□□ -1.8
PDR15YDR406W YFL015CP43578 164 aa3.8□□□□□ -1.8
PDR15YDR406W THG1P53215 237 aaKnown RBP3.8□□□□□ -1.8
PDR15YDR406W SED1Q01589 338 aa3.8□□□□□ -1.8
PDR15YDR406W SHH4Q06236 168 aa3.8□□□□□ -1.8
PDR15YDR406W BOL1Q3E793 110 aa3.8□□□□□ -1.8
PDR15YDR406W PIS1P06197 220 aaKnown RBP3.79□□□□□ -1.8
PDR15YDR406W FUN14P18411 198 aa3.79□□□□□ -1.8
PDR15YDR406W HYP2P23301 157 aaKnown RBP3.79□□□□□ -1.8
PDR15YDR406W YPL073CP40323 161 aa3.79□□□□□ -1.8
PDR15YDR406W AVO2Q04749 426 aa3.79□□□□□ -1.8
PDR15YDR406W TIM18Q08749 192 aa3.79□□□□□ -1.8
PDR15YDR406W YLR342W-AQ3E810 57 aa3.79□□□□□ -1.8
PDR15YDR406W YPL229WQ99395 206 aa3.79□□□□□ -1.8
PDR15YDR406W AHT1P29589 182 aa3.79□□□□□ -1.8
PDR15YDR406W SDH4P37298 181 aa3.79□□□□□ -1.8
PDR15YDR406W YHR022CP38763 256 aa3.79□□□□□ -1.8
PDR15YDR406W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
PDR15YDR406W POC4Q12245 148 aaPredicted RBP3.79□□□□□ -1.8
PDR15YDR406W YAR029WP39549 74 aa3.79□□□□□ -1.8
PDR15YDR406W PHS1P40857 217 aa3.79□□□□□ -1.8
PDR15YDR406W BET5Q03630 159 aa3.79□□□□□ -1.8
PDR15YDR406W IRC23Q08416 157 aa3.79□□□□□ -1.8
PDR15YDR406W SPT4P32914 102 aaPredicted RBP3.78□□□□□ -1.8
PDR15YDR406W LST8P41318 303 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms