RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W URA5P13298 226 aaKnown RBP1.42□□□□□ -2.18
UBP1YDL122W YCR101CP25607 182 aa1.42□□□□□ -2.18
UBP1YDL122W UBC8P28263 218 aa1.42□□□□□ -2.18
UBP1YDL122W MRPL38P35996 138 aaPredicted RBP1.42□□□□□ -2.18
UBP1YDL122W YHR125WP38831 101 aa1.42□□□□□ -2.18
UBP1YDL122W ARC15P40518 154 aaRIP-Chip data1.42□□□□□ -2.18not detected
UBP1YDL122W SKI6P46948 246 aaPredicted RBP1.42□□□□□ -2.18
UBP1YDL122W FCF1Q05498 189 aaPredicted RBP1.42□□□□□ -2.18
UBP1YDL122W TSC3Q3E790 80 aa1.42□□□□□ -2.18
UBP1YDL122W YCR075W-AQ3E830 75 aa1.42□□□□□ -2.18
UBP1YDL122W ATG40Q99325 256 aa1.42□□□□□ -2.18
UBP1YDL122W RPL9AP05738 191 aaKnown RBP1.42□□□□□ -2.18
UBP1YDL122W PBI2P0CT04 75 aaKnown RBP1.42□□□□□ -2.18
UBP1YDL122W PKR1Q03880 122 aaKnown RBP1.42□□□□□ -2.18
UBP1YDL122W TSA2Q04120 196 aa1.42□□□□□ -2.18
UBP1YDL122W YPD1Q07688 167 aa1.42□□□□□ -2.18
UBP1YDL122W YDR010CQ12426 110 aa1.42□□□□□ -2.18
UBP1YDL122W Q0255P03881 472 aa1.41□□□□□ -2.18
UBP1YDL122W SPO13P23624 291 aa1.41□□□□□ -2.18
UBP1YDL122W MRPS9P38120 278 aa1.41□□□□□ -2.18
UBP1YDL122W PRE5P40302 234 aaKnown RBP1.41□□□□□ -2.18
UBP1YDL122W YGL088WP53151 121 aa1.41□□□□□ -2.18
UBP1YDL122W RAV2Q03956 351 aa1.41□□□□□ -2.18
UBP1YDL122W GAL83Q04739 417 aa1.41□□□□□ -2.18
UBP1YDL122W YOR289WQ12012 251 aaPredicted RBP1.41□□□□□ -2.18
UBP1YDL122W YPR063CQ12160 140 aa1.41□□□□□ -2.18
UBP1YDL122W IPI1P38803 334 aaPredicted RBP1.41□□□□□ -2.18
UBP1YDL122W RIO2P40160 425 aaKnown RBP1.41□□□□□ -2.18
UBP1YDL122W GPI14P47088 403 aaKnown RBP1.41□□□□□ -2.18
UBP1YDL122W DSK2P48510 373 aa1.41□□□□□ -2.18
UBP1YDL122W YGR026WP53217 278 aa1.41□□□□□ -2.18
UBP1YDL122W RNH202Q05635 350 aa1.41□□□□□ -2.18
UBP1YDL122W HIS3P06633 220 aa1.4□□□□□ -2.18
UBP1YDL122W ADK1P07170 222 aaKnown RBP1.4□□□□□ -2.18
UBP1YDL122W UBI4P0CG63 381 aaKnown RBP1.4□□□□□ -2.18
UBP1YDL122W CCA1P21269 546 aa1.4□□□□□ -2.18
UBP1YDL122W HYP2P23301 157 aaKnown RBP1.4□□□□□ -2.18
UBP1YDL122W IPT1P38954 527 aa1.4□□□□□ -2.18
UBP1YDL122W SER2P42941 309 aa1.4□□□□□ -2.18
UBP1YDL122W YOL014WQ08110 124 aa1.4□□□□□ -2.18
UBP1YDL122W YKL018C-AQ3E7A7 99 aa1.4□□□□□ -2.18
UBP1YDL122W YHR032W-AP0C5N6 59 aa1.4□□□□□ -2.19
UBP1YDL122W RPL2AP0CX45 254 aaKnown RBP1.4□□□□□ -2.19
UBP1YDL122W RPL2BP0CX46 254 aaKnown RBP1.4□□□□□ -2.19
UBP1YDL122W ATP15P21306 62 aa1.4□□□□□ -2.19
UBP1YDL122W CCS1P40202 249 aaKnown RBP1.4□□□□□ -2.19
UBP1YDL122W DGK1Q12382 290 aa1.4□□□□□ -2.19
UBP1YDL122W YML100W-AQ8TGT0 57 aa1.4□□□□□ -2.19
UBP1YDL122W RPS11AP0CX47 156 aaKnown RBP1.39□□□□□ -2.19
UBP1YDL122W RPS11BP0CX48 156 aaKnown RBP1.39□□□□□ -2.19
UBP1YDL122W YKR032WP36127 104 aa1.39□□□□□ -2.19
UBP1YDL122W MRPL17P36528 281 aa1.39□□□□□ -2.19
UBP1YDL122W YEA4P40004 342 aa1.39□□□□□ -2.19
UBP1YDL122W YJR015WP47090 510 aa1.39□□□□□ -2.19
UBP1YDL122W RBL2P48606 106 aaKnown RBP1.39□□□□□ -2.19
UBP1YDL122W THI74Q04083 370 aa1.39□□□□□ -2.19
UBP1YDL122W YOR268CQ08734 132 aa1.39□□□□□ -2.19
UBP1YDL122W CSH1P38287 376 aa1.39□□□□□ -2.19
UBP1YDL122W FCY21P40039 528 aa1.39□□□□□ -2.19
UBP1YDL122W YER134CP40081 178 aa1.39□□□□□ -2.19
UBP1YDL122W COA4Q05809 96 aa1.39□□□□□ -2.19
UBP1YDL122W YLR412C-AQ3E742 68 aa1.39□□□□□ -2.19
UBP1YDL122W YDR034C-AP0C289 58 aa1.38□□□□□ -2.19
UBP1YDL122W SFK1P35735 353 aa1.38□□□□□ -2.19
UBP1YDL122W RPS20P38701 121 aaKnown RBP1.38□□□□□ -2.19
UBP1YDL122W DLS1P40366 167 aa1.38□□□□□ -2.19
UBP1YDL122W YIR035CP40579 254 aa1.38□□□□□ -2.19
UBP1YDL122W ORM1P53224 222 aa1.38□□□□□ -2.19
UBP1YDL122W YCR001WP25347 104 aa1.38□□□□□ -2.19
UBP1YDL122W PAN3P36102 679 aaPredicted RBP1.38□□□□□ -2.19
UBP1YDL122W YIL059CP40520 121 aa1.38□□□□□ -2.19
UBP1YDL122W GVP36P40531 326 aaKnown RBP1.38□□□□□ -2.19
UBP1YDL122W SMD3P43321 101 aaKnown RBP1.38□□□□□ -2.19
UBP1YDL122W YFL019CP43576 117 aa1.38□□□□□ -2.19
UBP1YDL122W YLR361C-AQ3E795 98 aa1.38□□□□□ -2.19
UBP1YDL122W YLR307C-AQ3E825 87 aa1.38□□□□□ -2.19
UBP1YDL122W YAR023CD6VPM8 179 aa1.37□□□□□ -2.19
UBP1YDL122W RTC6O14464 93 aa1.37□□□□□ -2.19
UBP1YDL122W NOP1P15646 327 aaKnown RBP1.37□□□□□ -2.19
UBP1YDL122W YBR285WP38354 144 aa1.37□□□□□ -2.19
UBP1YDL122W VTC1P40046 129 aaRIP-Chip data1.37□□□□□ -2.19not detected
UBP1YDL122W CIN5P40917 295 aa1.37□□□□□ -2.19
UBP1YDL122W SML1Q04964 104 aa1.37□□□□□ -2.19
UBP1YDL122W NAT3Q06504 195 aa1.37□□□□□ -2.19
UBP1YDL122W ODC2Q99297 307 aa1.37□□□□□ -2.19
UBP1YDL122W NHP6AP11632 93 aaKnown RBP1.37□□□□□ -2.19
UBP1YDL122W PEX4P29340 183 aa1.37□□□□□ -2.19
UBP1YDL122W MID2P36027 376 aa1.37□□□□□ -2.19
UBP1YDL122W SNF11P38956 169 aa1.37□□□□□ -2.19
UBP1YDL122W TIR3P40552 269 aa1.37□□□□□ -2.19
UBP1YDL122W RAD28Q12021 506 aa1.37□□□□□ -2.19
UBP1YDL122W SPC3Q12133 184 aa1.37□□□□□ -2.19
UBP1YDL122W PST2Q12335 198 aaKnown RBP1.37□□□□□ -2.19
UBP1YDL122W SNC2P33328 115 aa1.36□□□□□ -2.19
UBP1YDL122W UMP1P38293 148 aa1.36□□□□□ -2.19
UBP1YDL122W YPL073CP40323 161 aa1.36□□□□□ -2.19
UBP1YDL122W PGD1P40356 397 aa1.36□□□□□ -2.19
UBP1YDL122W RPS29AP41057 56 aaKnown RBP1.36□□□□□ -2.19
UBP1YDL122W UBC7Q02159 165 aa1.36□□□□□ -2.19
UBP1YDL122W DYN2Q02647 92 aa1.36□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 115.6 ms