RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W TDA7P53882 636 aaPredicted RBP3.85□□□□□ -1.79
VHC1YBR235W ERG2P32352 222 aa3.85□□□□□ -1.79
VHC1YBR235W PAD1P33751 242 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
VHC1YBR235W MIX17Q03667 156 aa3.85□□□□□ -1.79
VHC1YBR235W GAT3Q07928 141 aa3.85□□□□□ -1.79
VHC1YBR235W YDL180WQ12301 547 aa3.85□□□□□ -1.79
VHC1YBR235W KSH1Q8TGJ3 72 aa3.85□□□□□ -1.79
VHC1YBR235W GLE2P40066 365 aa3.85□□□□□ -1.79
VHC1YBR235W CIS3P47001 227 aa3.85□□□□□ -1.79
VHC1YBR235W BRP1P53194 125 aa3.85□□□□□ -1.79
VHC1YBR235W YLR281CQ05863 155 aa3.85□□□□□ -1.79
VHC1YBR235W RXT3Q07458 294 aa3.85□□□□□ -1.79
VHC1YBR235W RRT15Q3E811 62 aa3.85□□□□□ -1.79
VHC1YBR235W YER181CP40097 107 aa3.84□□□□□ -1.79
VHC1YBR235W YDR209CQ03480 137 aa3.84□□□□□ -1.79
VHC1YBR235W YOR097CQ12274 175 aaPredicted RBP3.84□□□□□ -1.79
VHC1YBR235W MPD1Q12404 318 aaKnown RBP3.84□□□□□ -1.79
VHC1YBR235W YHR139C-AO13536 103 aa3.84□□□□□ -1.79
VHC1YBR235W LST8P41318 303 aa3.84□□□□□ -1.79
VHC1YBR235W CPD1P53314 239 aa3.84□□□□□ -1.79
VHC1YBR235W PIS1P06197 220 aaKnown RBP3.83□□□□□ -1.8
VHC1YBR235W RPS16AP0CX51 143 aaKnown RBP3.83□□□□□ -1.8
VHC1YBR235W RPS16BP0CX52 143 aaKnown RBP3.83□□□□□ -1.8
VHC1YBR235W GPI18P38211 433 aa3.83□□□□□ -1.8
VHC1YBR235W LYS1P38998 373 aaRIP-Chip data3.83□□□□□ -1.8not detected
VHC1YBR235W SDC1Q03323 175 aa3.83□□□□□ -1.8
VHC1YBR235W RPS21BQ3E754 87 aaKnown RBP3.83□□□□□ -1.8
VHC1YBR235W SMP1P38128 452 aa3.83□□□□□ -1.8
VHC1YBR235W EAF6P47128 113 aa3.83□□□□□ -1.8
VHC1YBR235W RPS22AP0C0W1 130 aaKnown RBP3.82□□□□□ -1.8
VHC1YBR235W PEX22P39718 180 aa3.82□□□□□ -1.8
VHC1YBR235W MMS2P53152 137 aa3.82□□□□□ -1.8
VHC1YBR235W API2Q04413 109 aa3.82□□□□□ -1.8
VHC1YBR235W MBB1P39534 108 aa3.82□□□□□ -1.8
VHC1YBR235W YPL073CP40323 161 aa3.82□□□□□ -1.8
VHC1YBR235W YGR269WP40326 108 aa3.82□□□□□ -1.8
VHC1YBR235W VHS2P40463 436 aa3.82□□□□□ -1.8
VHC1YBR235W FIP1P45976 327 aa3.82□□□□□ -1.8
VHC1YBR235W YOR186WQ08560 144 aa3.82□□□□□ -1.8
VHC1YBR235W KTI11Q3E840 82 aa3.82□□□□□ -1.8
VHC1YBR235W FPR2P32472 135 aa3.82□□□□□ -1.8
VHC1YBR235W REC114P32841 428 aa3.82□□□□□ -1.8
VHC1YBR235W FMP46P36141 133 aaKnown RBP3.82□□□□□ -1.8
VHC1YBR235W RPS14AP06367 137 aaKnown RBP3.81□□□□□ -1.8
VHC1YBR235W YCR006CP25350 157 aa3.81□□□□□ -1.8
VHC1YBR235W FZF1P32805 299 aa3.81□□□□□ -1.8
VHC1YBR235W TIM18Q08749 192 aa3.81□□□□□ -1.8
VHC1YBR235W DAT1P13483 248 aaKnown RBP3.81□□□□□ -1.8
VHC1YBR235W TIM12P32830 109 aa3.81□□□□□ -1.8
VHC1YBR235W YHL042WP38729 150 aa3.81□□□□□ -1.8
VHC1YBR235W TPC1P53257 314 aa3.81□□□□□ -1.8
VHC1YBR235W YPL062WQ02781 134 aa3.81□□□□□ -1.8
VHC1YBR235W YFH1Q07540 174 aa3.81□□□□□ -1.8
VHC1YBR235W YPR064WQ12492 139 aa3.81□□□□□ -1.8
VHC1YBR235W YKL023C-AQ2V2P3 75 aa3.81□□□□□ -1.8
VHC1YBR235W MRS3P10566 314 aa3.8□□□□□ -1.8
VHC1YBR235W YSR3P23501 404 aa3.8□□□□□ -1.8
VHC1YBR235W RRT13P40042 185 aa3.8□□□□□ -1.8
VHC1YBR235W QRI5P32344 111 aa3.8□□□□□ -1.8
VHC1YBR235W YHL018WP38744 120 aaPredicted RBP3.8□□□□□ -1.8
VHC1YBR235W TIM17P39515 158 aa3.8□□□□□ -1.8
VHC1YBR235W YEL067CP39978 195 aa3.8□□□□□ -1.8
VHC1YBR235W SKI6P46948 246 aaPredicted RBP3.8□□□□□ -1.8
VHC1YBR235W SWS2P53937 143 aa3.8□□□□□ -1.8
VHC1YBR235W RRS1Q08746 203 aaKnown RBP3.8□□□□□ -1.8
VHC1YBR235W YBR255C-AQ3E776 120 aa3.8□□□□□ -1.8
VHC1YBR235W HUG1Q6Q5K6 68 aa3.8□□□□□ -1.8
VHC1YBR235W BET1P22804 142 aa3.8□□□□□ -1.8
VHC1YBR235W APS1P35181 156 aa3.8□□□□□ -1.8
VHC1YBR235W RPL34BP40525 121 aaKnown RBP3.8□□□□□ -1.8
VHC1YBR235W IST3P40565 148 aaPredicted RBP3.8□□□□□ -1.8
VHC1YBR235W YNL277W-AQ3E7Z0 62 aa3.8□□□□□ -1.8
VHC1YBR235W QCR9P22289 66 aa3.79□□□□□ -1.8
VHC1YBR235W IMP1P28627 190 aa3.79□□□□□ -1.8
VHC1YBR235W RPP1P38786 293 aa3.79□□□□□ -1.8
VHC1YBR235W YFL019CP43576 117 aa3.79□□□□□ -1.8
VHC1YBR235W ISF1P32488 338 aa3.79□□□□□ -1.8
VHC1YBR235W IES6P32617 166 aa3.79□□□□□ -1.8
VHC1YBR235W YBR209WP38311 105 aa3.79□□□□□ -1.8
VHC1YBR235W MRX11Q03079 207 aa3.79□□□□□ -1.8
VHC1YBR235W YPL261CQ08976 102 aa3.79□□□□□ -1.8
VHC1YBR235W YOR376W-AQ3E805 51 aa3.79□□□□□ -1.8
VHC1YBR235W BLM10P43583 2143 aa3.79□□□□□ -1.8
VHC1YBR235W MRPL31P14063 131 aaPredicted RBP3.79□□□□□ -1.8
VHC1YBR235W VMA3P25515 160 aa3.79□□□□□ -1.8
VHC1YBR235W PCL2P25693 308 aa3.79□□□□□ -1.8
VHC1YBR235W PCL5P38794 229 aa3.79□□□□□ -1.8
VHC1YBR235W NRM1P53718 249 aa3.79□□□□□ -1.8
VHC1YBR235W YOR268CQ08734 132 aa3.79□□□□□ -1.8
VHC1YBR235W YPL264CQ08980 353 aa3.79□□□□□ -1.8
VHC1YBR235W YOR192C-CQ3E736 78 aa3.79□□□□□ -1.8
VHC1YBR235W RPS21AP0C0V8 87 aaKnown RBP3.78□□□□□ -1.8
VHC1YBR235W YPI1P43587 155 aa3.78□□□□□ -1.8
VHC1YBR235W JJJ3P47138 172 aa3.78□□□□□ -1.8
VHC1YBR235W YGL034CP53186 121 aa3.78□□□□□ -1.8
VHC1YBR235W BOL1Q3E793 110 aa3.78□□□□□ -1.8
VHC1YBR235W DIF1O13577 133 aa3.78□□□□□ -1.8
VHC1YBR235W TOM6P33448 61 aa3.78□□□□□ -1.8
VHC1YBR235W PET191Q02772 108 aa3.78□□□□□ -1.8
VHC1YBR235W ROT1Q03691 256 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms