RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 CYP11B1P15538 503 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 OR1G1P47890 313 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 GPC5P78333 572 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 FMO1Q01740 532 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 CDR2Q01850 454 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 SMC1AQ14683 1233 aaKnown RBP10.9□□□□□ -0.66
PHGDH-224ENST00000641711 CASP8Q14790 479 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 UPP1Q16831 310 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 DUOXA2Q1HG44 320 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 SEZ6Q53EL9 994 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 C11orf63Q6NUN7 778 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 ZNF677Q86XU0 584 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 DNAAF5Q86Y56 855 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 PALB2Q86YC2 1186 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 EFCAB13Q8IY85 973 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 LRRC52Q8N7C0 313 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 KLHL23Q8NBE8 558 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 SPATA18Q8TC71 538 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 SPPL3Q8TCT6 385 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 DDX1Q92499 740 aaKnown RBP10.9□□□□□ -0.66
PHGDH-224ENST00000641711 ARHGEF26Q96DR7 871 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 MRPL38Q96DV4 380 aaKnown RBP10.9□□□□□ -0.66
PHGDH-224ENST00000641711 FAM212AQ96EL1 285 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 PCDHB18PQ96TA0 734 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 PSMB7Q99436 277 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 LRRC1Q9BTT6 524 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 THAP2Q9H0W7 228 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 NGRNQ9NPE2 291 aaKnown RBP10.9□□□□□ -0.66
PHGDH-224ENST00000641711 TLR9Q9NR96 1032 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 RBM12Q9NTZ6 932 aaKnown RBP10.9□□□□□ -0.66
PHGDH-224ENST00000641711 MARCH5Q9NX47 278 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 IRAK3Q9Y616 596 aa10.9□□□□□ -0.66
PHGDH-224ENST00000641711 CASTOR2A6NHX0 329 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 KCNK3O14649 394 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 SYN3O14994 580 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 B4GALT3O60512 393 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 STAU1O95793 577 aaKnown RBP10.89□□□□□ -0.67
PHGDH-224ENST00000641711 HLA-DRAP01903 254 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 SOD2P04179 222 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 CYP1A2P05177 515 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 AARSP49588 968 aaKnown RBP eCLIP10.89□□□□□ -0.67
PHGDH-224ENST00000641711 PDE6CP51160 858 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 BPIFB4P59827 614 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 TNNC1P63316 161 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 SOX4Q06945 474 aaPredicted RBP10.89□□□□□ -0.67
PHGDH-224ENST00000641711 CLUL1Q15846 466 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 WDR44Q5JSH3 913 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 TDRD10Q5VZ19 366 aaKnown RBP10.89□□□□□ -0.67
PHGDH-224ENST00000641711 C8orf74Q6P047 294 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 FUT10Q6P4F1 479 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 DAAM2Q86T65 1068 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 SLC47A2Q86VL8 602 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 DEFB123Q8N688 67 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 EIF1ADQ8N9N8 165 aaKnown RBP10.89□□□□□ -0.67
PHGDH-224ENST00000641711 AENQ8WTP8 325 aaKnown RBP10.89□□□□□ -0.67
PHGDH-224ENST00000641711 TATDN2Q93075 761 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 OXCT2Q9BYC2 517 aaPredicted RBP10.89□□□□□ -0.67
PHGDH-224ENST00000641711 ZBP1Q9H171 429 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 ACBD3Q9H3P7 528 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 PDE11AQ9HCR9 933 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 GDF3Q9NR23 364 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.89□□□□□ -0.67
PHGDH-224ENST00000641711 SMARCAL1Q9NZC9 954 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 EHD2Q9NZN4 543 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 STIM2Q9P246 746 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 HCSTQ9UBK5 93 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 PACSIN2Q9UNF0 486 aaPredicted RBP10.89□□□□□ -0.67
PHGDH-224ENST00000641711 CNTN6Q9UQ52 1028 aa10.89□□□□□ -0.67
PHGDH-224ENST00000641711 PRG3Q9Y2Y8 225 aaPredicted RBP10.89□□□□□ -0.67
PHGDH-224ENST00000641711 TSC2P49815 1807 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 TMCO5BA8MYB1 307 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 MIF4GDA9UHW6 222 aaKnown RBP10.88□□□□□ -0.67
PHGDH-224ENST00000641711 BHMG1C9JSJ3 638 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-224ENST00000641711 CCDC188H7C350 402 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 PGRMC1O00264 195 aaKnown RBP10.88□□□□□ -0.67
PHGDH-224ENST00000641711 PIRO00625 290 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 FSCN2O14926 492 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 DDX3YO15523 660 aaKnown RBP10.88□□□□□ -0.67
PHGDH-224ENST00000641711 LPXNO60711 386 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 B3GAT3O94766 335 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 URODP06132 367 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 CTSAP10619 480 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 TNNI1P19237 187 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 ABCB4P21439 1286 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 ATICP31939 592 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 USP8P40818 1118 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 TAF6P49848 677 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 WNT7BP56706 349 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 RBP5P82980 135 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 TFAMQ00059 246 aaKnown RBP10.88□□□□□ -0.67
PHGDH-224ENST00000641711 GPS2Q13227 327 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 NNTQ13423 1086 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 GRIN2CQ14957 1233 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 USP41Q3LFD5 358 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 SV2CQ496J9 727 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 C9orf57Q5W0N0 161 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 ACAD10Q6JQN1 1059 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 IFT20Q8IY31 132 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 C1orf127Q8N9H9 656 aa10.88□□□□□ -0.67
PHGDH-224ENST00000641711 GDPD5Q8WTR4 605 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms