RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 KANSL3Q9P2N6 904 aa11.5□□□□□ -0.57
SHANK2-219ENST00000606715 A0A087WUV0 522 aaPredicted RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 KRT20P35900 424 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 ABCE1P61221 599 aaKnown RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 CAMK2GQ13555 558 aaPredicted RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 UGP2Q16851 508 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 PPM1LQ5SGD2 360 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 DHX40Q8IX18 779 aaKnown RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 FHOD1Q9Y613 1164 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 MYPNQ86TC9 1320 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 ABCC6O95255 1503 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 GRAP2O75791 330 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 HPGDP15428 266 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 GRK3P35626 688 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 TMED1Q13445 227 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 DHX34Q14147 1143 aaKnown RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 TRADDQ15628 312 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 FAM133BQ5BKY9 247 aaKnown RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 GLRA4Q5JXX5 417 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 MPZL3Q6UWV2 235 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 FBXO16Q8IX29 292 aaPredicted RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 IPMKQ8NFU5 416 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 PNKPQ96T60 521 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 H2AFY2Q9P0M6 372 aaPredicted RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 FOXN1O15353 648 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 NPEPPSP55786 919 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 SLC7A5Q01650 507 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 ZNF211Q13398 564 aaPredicted RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 TMEM199Q8N511 208 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 CALML6Q8TD86 181 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 ATP8B4Q8TF62 1192 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 XPO6Q96QU8 1125 aaKnown RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 AGO4Q9HCK5 861 aaKnown RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 TMEM51Q9NW97 253 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 DPP3Q9NY33 737 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 SPASTQ9UBP0 616 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 TMEM88BA6NKF7 163 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 PBLDP30039 288 aaPredicted RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 TTLL9Q3SXZ7 439 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 CEP68Q76N32 757 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 RUBCNQ92622 972 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 TARS2Q9BW92 718 aaKnown RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 AGXT2Q9BYV1 514 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 HPS4Q9NQG7 708 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 ADGRG1Q9Y653 693 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 SMAPO00193 183 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 IFT88Q13099 833 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 MAPRE2Q15555 327 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 IQSEC1Q6DN90 963 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 MKL1Q969V6 931 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 MYCBPQ99417 103 aaPredicted RBP11.49□□□□□ -0.57
SHANK2-219ENST00000606715 CCDC90BQ9GZT6 254 aa11.49□□□□□ -0.57
SHANK2-219ENST00000606715 GUCY2CP25092 1073 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 C4orf22Q6V702 233 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 EPM2AIP1Q7L775 607 aaPredicted RBP11.48□□□□□ -0.57
SHANK2-219ENST00000606715 NUDCD3Q8IVD9 361 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 UBA3Q8TBC4 463 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 PITPNM3Q9BZ71 974 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 PDE11AQ9HCR9 933 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 VPS28Q9UK41 221 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 APPL1Q9UKG1 709 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 RNF103-CHMP3A0A140T963 221 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 MTSS1O43312 755 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 AP1G2O75843 785 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 PDK1Q15118 436 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 VGLL2Q8N8G2 317 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 JADE3Q92613 823 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 NMRK2Q9NPI5 230 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 SPATS2LQ9NUQ6 558 aaKnown RBP11.48□□□□□ -0.57
SHANK2-219ENST00000606715 WARS2Q9UGM6 360 aaKnown RBP11.48□□□□□ -0.57
SHANK2-219ENST00000606715 PSMD12O00232 456 aaPredicted RBP11.48□□□□□ -0.57
SHANK2-219ENST00000606715 MCF2P10911 925 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 AXLP30530 894 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 SLC45A4Q5BKX6 768 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 C6orf10Q5SRN2 563 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHANK2-219ENST00000606715 ASCC2Q9H1I8 757 aaPredicted RBP11.48□□□□□ -0.57
SHANK2-219ENST00000606715 SALL3Q9BXA9 1300 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 GLTPD2A6NH11 291 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 H3BRB1 525 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 TEX33O43247 280 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 THP07101 528 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 OXCT1P55809 520 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 TMC2Q8TDI7 906 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 PRPF18Q99633 342 aaKnown RBP11.48□□□□□ -0.57
SHANK2-219ENST00000606715 TUT1Q9H6E5 874 aaKnown RBP11.48□□□□□ -0.57
SHANK2-219ENST00000606715 AGPAT3Q9NRZ7 376 aa11.48□□□□□ -0.57
SHANK2-219ENST00000606715 ITGB3P05106 788 aa11.47□□□□□ -0.57
SHANK2-219ENST00000606715 ARSEP51690 589 aa11.47□□□□□ -0.57
SHANK2-219ENST00000606715 MAP3K10Q02779 954 aa11.47□□□□□ -0.57
SHANK2-219ENST00000606715 PGM5Q15124 567 aa11.47□□□□□ -0.57
SHANK2-219ENST00000606715 ADGRA1Q86SQ6 560 aa11.47□□□□□ -0.57
SHANK2-219ENST00000606715 AGR3Q8TD06 166 aa11.47□□□□□ -0.57
SHANK2-219ENST00000606715 HASPINQ8TF76 798 aa11.47□□□□□ -0.57
SHANK2-219ENST00000606715 YY1AP1Q9H869 796 aa11.47□□□□□ -0.57
SHANK2-219ENST00000606715 ANGPT2O15123 496 aa11.47□□□□□ -0.57
SHANK2-219ENST00000606715 MLNP12872 115 aa11.47□□□□□ -0.57
SHANK2-219ENST00000606715 TNNI3P19429 210 aa11.47□□□□□ -0.57
SHANK2-219ENST00000606715 NNTQ13423 1086 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms