RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 SH3PXD2AQ5TCZ1 1133 aa16.1■□□□□ 0.17
XRCC1-209ENST00000599693 ARL6IP4Q66PJ3 421 aaKnown RBP16.1■□□□□ 0.17
XRCC1-209ENST00000599693 PMS2CLQ68D20 193 aa16.1■□□□□ 0.17
XRCC1-209ENST00000599693 KDF1Q8NAX2 398 aaPredicted RBP16.1■□□□□ 0.17
XRCC1-209ENST00000599693 TRMT2BQ96GJ1 504 aaKnown RBP16.1■□□□□ 0.17
XRCC1-209ENST00000599693 ZNF560Q96MR9 790 aa16.1■□□□□ 0.17
XRCC1-209ENST00000599693 FIZ1Q96SL8 496 aa16.1■□□□□ 0.17
XRCC1-209ENST00000599693 WNT6Q9Y6F9 365 aa16.1■□□□□ 0.17
XRCC1-209ENST00000599693 WDFY3Q8IZQ1 3526 aa16.1■□□□□ 0.17
XRCC1-209ENST00000599693 HELZP42694 1942 aaKnown RBP16.09■□□□□ 0.17
XRCC1-209ENST00000599693 AKAP13Q12802 2813 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 THADAQ6YHU6 1953 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 TRAV19A0A0A6YYK7 116 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 TISP43B9A030 160 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 KHNYNO15037 678 aaKnown RBP16.09■□□□□ 0.17
XRCC1-209ENST00000599693 NOL4O94818 638 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 CKMP06732 381 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 PNPLA4P41247 253 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 RPL10AP62906 217 aaKnown RBP16.09■□□□□ 0.17
XRCC1-209ENST00000599693 POU5F1Q01860 360 aaKnown RBP16.09■□□□□ 0.17
XRCC1-209ENST00000599693 DHX8Q14562 1220 aaKnown RBP16.09■□□□□ 0.17
XRCC1-209ENST00000599693 EML3Q32P44 896 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 USP39Q53GS9 565 aaKnown RBP16.09■□□□□ 0.17
XRCC1-209ENST00000599693 SDHAF4Q5VUM1 108 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 ADALQ6DHV7 355 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 MCTP1Q6DN14 999 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 SLFN12LQ6IEE8 588 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 EFCAB13Q8IY85 973 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 TSTD1Q8NFU3 115 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 CCDC26Q8TAB7 109 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 LRRC15Q8TF66 581 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 MYRFLQ96LU7 910 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 TMEM121BQ9BXQ6 578 aaPredicted RBP16.09■□□□□ 0.17
XRCC1-209ENST00000599693 ADAM33Q9BZ11 813 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 TRPC7Q9HCX4 862 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 ABCB6Q9NP58 842 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 TMEM9BQ9NQ34 198 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 AGO2Q9UKV8 859 aaKnown RBP16.09■□□□□ 0.17
XRCC1-209ENST00000599693 ANAPC1Q9H1A4 1944 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 ABCA7Q8IZY2 2146 aa16.09■□□□□ 0.17
XRCC1-209ENST00000599693 ZFYVE26Q68DK2 2539 aa16.08■□□□□ 0.17
XRCC1-209ENST00000599693 TMEM8BA6NDV4 472 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 TBCAO75347 108 aaKnown RBP16.08■□□□□ 0.16
XRCC1-209ENST00000599693 KRT18P05783 430 aaKnown RBP16.08■□□□□ 0.16
XRCC1-209ENST00000599693 USP17L7P0C7H9 530 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 CEACAM1P13688 526 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 SPINK2P20155 84 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 CSRP1P21291 193 aaKnown RBP16.08■□□□□ 0.16
XRCC1-209ENST00000599693 DDR2Q16832 855 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 CYP2U1Q7Z449 544 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 PDCL2Q8N4E4 241 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 TTC16Q8NEE8 873 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 CALML4Q96GE6 196 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 AK8Q96MA6 479 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 SLC22A12Q96S37 553 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 TPSD1Q9BZJ3 242 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 ZHX3Q9H4I2 956 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 BLOC1S4Q9NUP1 217 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 INVSQ9Y283 1065 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 STYXL1Q9Y6J8 313 aa16.08■□□□□ 0.16
XRCC1-209ENST00000599693 IL18RAPO95256 599 aa16.07■□□□□ 0.16
XRCC1-209ENST00000599693 SEC24BO95487 1268 aa16.07■□□□□ 0.16
XRCC1-209ENST00000599693 TCF3P15923 654 aa16.07■□□□□ 0.16
XRCC1-209ENST00000599693 CYP2F1P24903 491 aa16.07■□□□□ 0.16
XRCC1-209ENST00000599693 NR1H3Q13133 447 aa16.07■□□□□ 0.16
XRCC1-209ENST00000599693 ZC2HC1CQ53FD0 456 aaPredicted RBP16.07■□□□□ 0.16
XRCC1-209ENST00000599693 INTS6LQ5JSJ4 861 aaKnown RBP16.07■□□□□ 0.16
XRCC1-209ENST00000599693 CRELD2Q6UXH1 353 aaPredicted RBP16.07■□□□□ 0.16
XRCC1-209ENST00000599693 RASSF3Q86WH2 238 aa16.07■□□□□ 0.16
XRCC1-209ENST00000599693 NT5DC4Q86YG4 428 aa16.07■□□□□ 0.16
XRCC1-209ENST00000599693 USP33Q8TEY7 942 aa16.07■□□□□ 0.16
XRCC1-209ENST00000599693 CNOT6LQ96LI5 555 aaKnown RBP16.07■□□□□ 0.16
XRCC1-209ENST00000599693 CYP2S1Q96SQ9 504 aa16.07■□□□□ 0.16
XRCC1-209ENST00000599693 ACBD6Q9BR61 282 aa16.07■□□□□ 0.16
XRCC1-209ENST00000599693 ST6GALNAC4Q9H4F1 302 aa16.07■□□□□ 0.16
XRCC1-209ENST00000599693 L1RE1Q9UN81 338 aa16.07■□□□□ 0.16
XRCC1-209ENST00000599693 KIF3AQ9Y496 699 aa16.07■□□□□ 0.16
XRCC1-209ENST00000599693 PTPRDP23468 1912 aa16.06■□□□□ 0.16
XRCC1-209ENST00000599693 PATE3B3GLJ2 98 aa16.06■□□□□ 0.16
XRCC1-209ENST00000599693 CDX4O14627 284 aaPredicted RBP16.06■□□□□ 0.16
XRCC1-209ENST00000599693 HUS1O60921 280 aa16.06■□□□□ 0.16
XRCC1-209ENST00000599693 BCKDHBP21953 392 aa16.06■□□□□ 0.16
XRCC1-209ENST00000599693 UBA7P41226 1012 aa16.06■□□□□ 0.16
XRCC1-209ENST00000599693 COL9A2Q14055 689 aaPredicted RBP16.06■□□□□ 0.16
XRCC1-209ENST00000599693 MCM6Q14566 821 aa16.06■□□□□ 0.16
XRCC1-209ENST00000599693 ANO7Q6IWH7 933 aa16.06■□□□□ 0.16
XRCC1-209ENST00000599693 SH3RF2Q8TEC5 729 aa16.06■□□□□ 0.16
XRCC1-209ENST00000599693 RAD54LQ92698 747 aa16.06■□□□□ 0.16
XRCC1-209ENST00000599693 PKMYT1Q99640 499 aa16.06■□□□□ 0.16
XRCC1-209ENST00000599693 DDX43Q9NXZ2 648 aaKnown RBP16.06■□□□□ 0.16
XRCC1-209ENST00000599693 GCNT4Q9P109 453 aa16.06■□□□□ 0.16
XRCC1-209ENST00000599693 PKD1L2Q7Z442 2459 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 DMXL2Q8TDJ6 3036 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 C2orf78A6NCI8 922 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 K7EQS6 105 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 NFATC1O95644 943 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 TOP3BO95985 862 aaKnown RBP16.05■□□□□ 0.16
XRCC1-209ENST00000599693 PLCG1P19174 1290 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 ACAT1P24752 427 aaKnown RBP16.05■□□□□ 0.16
XRCC1-209ENST00000599693 POLR2BP30876 1174 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms